Literature DB >> 27033830

FOURIER TRANSFORM INFRARED SPECTROSCOPY OF MICROALGAE AS A NOVEL TOOL FOR BIODIVERSITY STUDIES, SPECIES IDENTIFICATION, AND THE ASSESSMENT OF WATER QUALITY(1).

Alberto Domenighini1, Mario Giordano1.   

Abstract

Fourier transform infrared (FTIR) spectrometry was used to study the spectral features of 12 eukaryotic and two prokaryotic species of microalgae. The algae were cultured in liquid media containing either NO3 (-) or NH4 (+) as the sole N-source; for the NH4 (+) treatment, the algae were subjected to short-term (24 h) or long-term (1 month) incubations; for the hypersaline species, cells were also grown in the presence of 2 M NaCl. Over 500 spectra, acquired from at least three distinct cultures for each species, in each growth regime, were subjected to hierarchical cluster analysis (HCA) and were successfully separated according to their taxonomy, showing that the overall spectra were characteristic of each species and that this technique could be fruitfully employed to separate microalgal species living in a similar condition (as would be the case for a natural assemblage). In addition, in most cases, it was possible to differentiate between algae subjected to different growth treatments although belonging to the same species. We also demonstrated that it is possible to accurately identify species and determine the nutritional status of their environment of origin (e.g., N-source), provided that suitable FTIR spectral libraries are available. This study aims to provide the basis for the development of rapid, easy, and inexpensive methods for the evaluation of biodiversity in natural phytoplankton samples and to monitor the water quality of natural environments.
© 2009 Phycological Society of America.

Entities:  

Keywords:  FTIR spectrometry; acclimation; biodiversity; cell composition; hierarchical cluster analysis; homeostasis; phytoplankton; species identification

Year:  2009        PMID: 27033830     DOI: 10.1111/j.1529-8817.2009.00662.x

Source DB:  PubMed          Journal:  J Phycol        ISSN: 0022-3646            Impact factor:   2.923


  9 in total

1.  Carbon allocation and element composition in four Chlamydomonas mutants defective in genes related to the CO2 concentrating mechanism.

Authors:  Francesco Memmola; Bratati Mukherjee; James V Moroney; Mario Giordano
Journal:  Photosynth Res       Date:  2014-04-22       Impact factor: 3.573

2.  Regulation of Phagotrophy by Prey, Low Nutrients, and Low Light in the Mixotrophic Haptophyte Isochrysis galbana.

Authors:  Juan Manuel González-Olalla; Juan Manuel Medina-Sánchez; Alessandra Norici; Presentación Carrillo
Journal:  Microb Ecol       Date:  2021-03-04       Impact factor: 4.552

3.  Grazers and phytoplankton growth in the oceans: an experimental and evolutionary perspective.

Authors:  Simona Ratti; Andrew H Knoll; Mario Giordano
Journal:  PLoS One       Date:  2013-10-24       Impact factor: 3.240

4.  Fourier transform infrared with attenuated total reflectance applied to the discrimination of freshwater planktonic coccoid green microalgae.

Authors:  Guilherme Pavan de Moraes; Armando Augusto Henriques Vieira
Journal:  PLoS One       Date:  2014-12-26       Impact factor: 3.240

5.  Metabolic responses of eukaryotic microalgae to environmental stress limit the ability of FT-IR spectroscopy for species identification.

Authors:  Thomas Driver; Amit K Bajhaiya; J William Allwood; Royston Goodacre; Jon K Pittman; Andrew P Dean
Journal:  Algal Res       Date:  2015-09       Impact factor: 4.401

6.  Phenotypic plasticity of southern ocean diatoms: key to success in the sea ice habitat?

Authors:  Olivia Sackett; Katherina Petrou; Brian Reedy; Adrian De Grazia; Ross Hill; Martina Doblin; John Beardall; Peter Ralph; Philip Heraud
Journal:  PLoS One       Date:  2013-11-21       Impact factor: 3.240

7.  High-throughput metabolic screening of microalgae genetic variation in response to nutrient limitation.

Authors:  Amit K Bajhaiya; Andrew P Dean; Thomas Driver; Drupad K Trivedi; Nicholas J W Rattray; J William Allwood; Royston Goodacre; Jon K Pittman
Journal:  Metabolomics       Date:  2015-11-13       Impact factor: 4.290

8.  On the Identification of Rayon/Viscose as a Major Fraction of Microplastics in the Marine Environment: Discrimination between Natural and Manmade Cellulosic Fibers Using Fourier Transform Infrared Spectroscopy.

Authors:  Ionela Raluca Comnea-Stancu; Karin Wieland; Georg Ramer; Andreas Schwaighofer; Bernhard Lendl
Journal:  Appl Spectrosc       Date:  2016-09-20       Impact factor: 2.388

9.  Evaluation of the population dynamics of microalgae isolated from the state of Chiapas, Mexico with respect to the nutritional quality of water.

Authors:  Yazmin Sánchez Roque; Yolanda Del Carmen Pérez-Luna; Joel Moreira Acosta; Neín Farrera Vázquez; Roberto Berrones Hernández; Sergio Saldaña Trinidad; Joseph Sebastian Pathiyamattom
Journal:  Biodivers Data J       Date:  2018-09-26
  9 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.