Literature DB >> 27032065

Microfluidic techniques for high throughput single cell analysis.

Amy Reece1, Bingzhao Xia1, Zhongliang Jiang1, Benjamin Noren1, Ralph McBride1, John Oakey2.   

Abstract

The microfabrication of microfluidic control systems and the development of increasingly sensitive molecular amplification tools have enabled the miniaturization of single cells analytical platforms. Only recently has the throughput of these platforms increased to a level at which populations can be screened at the single cell level. Techniques based upon both active and passive manipulation are now capable of discriminating between single cell phenotypes for sorting, diagnostic or prognostic applications in a variety of clinical scenarios. The introduction of multiphase microfluidics enables the segmentation of single cells into biochemically discrete picoliter environments. The combination of these techniques are enabling a class of single cell analytical platforms within great potential for data driven biomedicine, genomics and transcriptomics.
Copyright © 2016 Elsevier Ltd. All rights reserved.

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Year:  2016        PMID: 27032065      PMCID: PMC4975615          DOI: 10.1016/j.copbio.2016.02.015

Source DB:  PubMed          Journal:  Curr Opin Biotechnol        ISSN: 0958-1669            Impact factor:   9.740


  68 in total

1.  Microfluidic large-scale integration.

Authors:  Todd Thorsen; Sebastian J Maerkl; Stephen R Quake
Journal:  Science       Date:  2002-09-26       Impact factor: 47.728

2.  Geometrically mediated breakup of drops in microfluidic devices.

Authors:  D R Link; S L Anna; D A Weitz; H A Stone
Journal:  Phys Rev Lett       Date:  2004-02-06       Impact factor: 9.161

3.  On-chip single-copy real-time reverse-transcription PCR in isolated picoliter droplets.

Authors:  N Reginald Beer; Elizabeth K Wheeler; Lorenna Lee-Houghton; Nicholas Watkins; Shanavaz Nasarabadi; Nicole Hebert; Patrick Leung; Don W Arnold; Christopher G Bailey; Bill W Colston
Journal:  Anal Chem       Date:  2008-02-16       Impact factor: 6.986

4.  Microfluidic single-cell whole-transcriptome sequencing.

Authors:  Aaron M Streets; Xiannian Zhang; Chen Cao; Yuhong Pang; Xinglong Wu; Liang Xiong; Lu Yang; Yusi Fu; Liang Zhao; Fuchou Tang; Yanyi Huang
Journal:  Proc Natl Acad Sci U S A       Date:  2014-04-29       Impact factor: 11.205

5.  Isolation and characterization of circulating tumor cells from patients with localized and metastatic prostate cancer.

Authors:  Shannon L Stott; Richard J Lee; Sunitha Nagrath; Min Yu; David T Miyamoto; Lindsey Ulkus; Elizabeth J Inserra; Matthew Ulman; Simeon Springer; Zev Nakamura; Alessandra L Moore; Dina I Tsukrov; Maria E Kempner; Douglas M Dahl; Chin-Lee Wu; A John Iafrate; Matthew R Smith; Ronald G Tompkins; Lecia V Sequist; Mehmet Toner; Daniel A Haber; Shyamala Maheswaran
Journal:  Sci Transl Med       Date:  2010-03-31       Impact factor: 17.956

Review 6.  Microfluidic cell sorting: a review of the advances in the separation of cells from debulking to rare cell isolation.

Authors:  C Wyatt Shields; Catherine D Reyes; Gabriel P López
Journal:  Lab Chip       Date:  2015-03-07       Impact factor: 6.799

7.  High-purity and label-free isolation of circulating tumor cells (CTCs) in a microfluidic platform by using optically-induced-dielectrophoretic (ODEP) force.

Authors:  Song-Bin Huang; Min-Hsien Wu; Yen-Heng Lin; Chia-Hsun Hsieh; Chih-Liang Yang; Hung-Chih Lin; Ching-Ping Tseng; Gwo-Bin Lee
Journal:  Lab Chip       Date:  2013-04-07       Impact factor: 6.799

8.  Isolation and mutational analysis of circulating tumor cells from lung cancer patients with magnetic sifters and biochips.

Authors:  Christopher M Earhart; Casey E Hughes; Richard S Gaster; Chin Chun Ooi; Robert J Wilson; Lisa Y Zhou; Eric W Humke; Lingyun Xu; Dawson J Wong; Stephen B Willingham; Erich J Schwartz; Irving L Weissman; Stefanie S Jeffrey; Joel W Neal; Rajat Rohatgi; Heather A Wakelee; Shan X Wang
Journal:  Lab Chip       Date:  2014-01-07       Impact factor: 6.799

9.  A radial flow microfluidic device for ultra-high-throughput affinity-based isolation of circulating tumor cells.

Authors:  Vasudha Murlidhar; Mina Zeinali; Svetlana Grabauskiene; Mostafa Ghannad-Rezaie; Max S Wicha; Diane M Simeone; Nithya Ramnath; Rishindra M Reddy; Sunitha Nagrath
Journal:  Small       Date:  2014-07-29       Impact factor: 13.281

10.  Isolation and retrieval of circulating tumor cells using centrifugal forces.

Authors:  Han Wei Hou; Majid Ebrahimi Warkiani; Bee Luan Khoo; Zi Rui Li; Ross A Soo; Daniel Shao-Weng Tan; Wan-Teck Lim; Jongyoon Han; Ali Asgar S Bhagat; Chwee Teck Lim
Journal:  Sci Rep       Date:  2013-02-12       Impact factor: 4.379

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  32 in total

Review 1.  Microfluidics cell sample preparation for analysis: Advances in efficient cell enrichment and precise single cell capture.

Authors:  Liang Huang; Shengtai Bian; Yinuo Cheng; Guanya Shi; Peng Liu; Xiongying Ye; Wenhui Wang
Journal:  Biomicrofluidics       Date:  2017-02-06       Impact factor: 2.800

2.  Antibiotic susceptibility testing in less than 30 min using direct single-cell imaging.

Authors:  Özden Baltekin; Alexis Boucharin; Eva Tano; Dan I Andersson; Johan Elf
Journal:  Proc Natl Acad Sci U S A       Date:  2017-08-08       Impact factor: 11.205

Review 3.  Shape-based separation of micro-/nanoparticles in liquid phases.

Authors:  Behrouz Behdani; Saman Monjezi; Mason J Carey; Curtis G Weldon; Jie Zhang; Cheng Wang; Joontaek Park
Journal:  Biomicrofluidics       Date:  2018-10-23       Impact factor: 2.800

4.  Comparative cytocompatibility of multiple candidate cell types to photoencapsulation in PEGNB/PEGDA macroscale or microscale hydrogels.

Authors:  Zhongliang Jiang; Kun Jiang; Ralph McBride; John S Oakey
Journal:  Biomed Mater       Date:  2018-10-02       Impact factor: 3.715

5.  A microfluidic-based cell encapsulation platform to achieve high long-term cell viability in photopolymerized PEGNB hydrogel microspheres.

Authors:  Zhongliang Jiang; Bingzhao Xia; Ralph McBride; John Oakey
Journal:  J Mater Chem B       Date:  2016-11-25       Impact factor: 6.331

6.  Population-based analysis of cell-penetrating peptide uptake using a microfluidic droplet trapping array.

Authors:  Nora Safa; Manibarathi Vaithiyanathan; Shayan Sombolestani; Seleipiri Charles; Adam T Melvin
Journal:  Anal Bioanal Chem       Date:  2019-03-11       Impact factor: 4.142

7.  Single-cell isolation by a modular single-cell pipette for RNA-sequencing.

Authors:  Kai Zhang; Min Gao; Zechen Chong; Ying Li; Xin Han; Rui Chen; Lidong Qin
Journal:  Lab Chip       Date:  2016-11-29       Impact factor: 6.799

8.  Deterministic trapping, encapsulation and retrieval of single-cells.

Authors:  M Sauzade; E Brouzes
Journal:  Lab Chip       Date:  2017-06-27       Impact factor: 6.799

9.  Isolation of CD248-expressing stromal vascular fraction for targeted improvement of wound healing.

Authors:  Elizabeth Brett; Elizabeth R Zielins; Monica Chin; Michael Januszyk; Charles P Blackshear; Michael Findlay; Arash Momeni; Geoffrey C Gurtner; Michael T Longaker; Derrick C Wan
Journal:  Wound Repair Regen       Date:  2017-05-18       Impact factor: 3.617

Review 10.  Cell armor for protection against environmental stress: Advances, challenges and applications in micro- and nanoencapsulation of mammalian cells.

Authors:  Onur Hasturk; David L Kaplan
Journal:  Acta Biomater       Date:  2018-11-24       Impact factor: 8.947

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