Literature DB >> 27029869

ZIKA--How fast does this virus mutate?

Ian S Logan1.   

Abstract

The World Health Organization has declared the present Zika virus epidemic to be a 'Public Health Emergency of International Concern'. The virus appears to have spread from Thailand to French Polynesia in 2013, and has since infected over a million people in the countries of South and Central America. In most cases the infection is mild and transient, but the virus does appear to be strongly neurotropic and the presumptive cause of both birth defects in fetuses and Guillain-Barré syndrome in some adults. In this paper, the techniques and utilities developed in the study of mitochondrial DNA were applied to the Zika virus. As a result, it is possible to show in a simple manner how a phylogenetic tree may be constructed and how the mutation rate of the virus can be measured. The study showed the mutation rate to vary between 12 and 25 bases a year, in a viral genome of 10272 bases. This rapid mutation rate will enable the geographic spread of the epidemic to be monitored easily and may also prove useful in assisting the identification of preventative measures that are working, and those that are not.

Entities:  

Keywords:  Mutation rate; Phylogenetic tree; Polyprotein; Virus; Zika

Mesh:

Year:  2016        PMID: 27029869      PMCID: PMC4876826          DOI: 10.13918/j.issn.2095-8137.2016.2.110

Source DB:  PubMed          Journal:  Dongwuxue Yanjiu        ISSN: 0254-5853


  21 in total

1.  Phylogeny of the genus Flavivirus.

Authors:  G Kuno; G J Chang; K R Tsuchiya; N Karabatsos; C B Cropp
Journal:  J Virol       Date:  1998-01       Impact factor: 5.103

2.  First case of Zika virus infection in a returning Canadian traveler.

Authors:  Kevin Fonseca; Bonnie Meatherall; Danielle Zarra; Michael Drebot; Judy MacDonald; Kanti Pabbaraju; Sallene Wong; Patricia Webster; Robbin Lindsay; Raymond Tellier
Journal:  Am J Trop Med Hyg       Date:  2014-10-06       Impact factor: 2.345

3.  A Clinical Study of Miliary Brain Tuberculomas in China.

Authors:  Ming Yang; Jia-Tang Zhang; Yan Yao; Qing-Che Tan; Ting Gao; Cheng-Lin Tian; Xusheng Huang; Sheng-Yuan Yu
Journal:  Jpn J Infect Dis       Date:  2015-08-07       Impact factor: 1.362

4.  TWELVE ISOLATIONS OF ZIKA VIRUS FROM AEDES (STEGOMYIA) AFRICANUS (THEOBALD) TAKEN IN AND ABOVE A UGANDA FOREST.

Authors:  A J HADDOW; M C WILLIAMS; J P WOODALL; D I SIMPSON; L K GOMA
Journal:  Bull World Health Organ       Date:  1964       Impact factor: 9.408

5.  Guillain-Barré Syndrome outbreak associated with Zika virus infection in French Polynesia: a case-control study.

Authors:  Van-Mai Cao-Lormeau; Alexandre Blake; Sandrine Mons; Stéphane Lastère; Claudine Roche; Jessica Vanhomwegen; Timothée Dub; Laure Baudouin; Anita Teissier; Philippe Larre; Anne-Laure Vial; Christophe Decam; Valérie Choumet; Susan K Halstead; Hugh J Willison; Lucile Musset; Jean-Claude Manuguerra; Philippe Despres; Emmanuel Fournier; Henri-Pierre Mallet; Didier Musso; Arnaud Fontanet; Jean Neil; Frédéric Ghawché
Journal:  Lancet       Date:  2016-03-02       Impact factor: 79.321

6.  Recurrent pneumothorax: A rare complication of miliary tuberculosis.

Authors:  Nafees Ahmad Khan; Jamal Akhtar; Ummul Baneen; Mohammad Shameem; Zuber Ahmed; Rakesh Bhargava
Journal:  N Am J Med Sci       Date:  2011-09

7.  A crystal structure of the Dengue virus NS5 protein reveals a novel inter-domain interface essential for protein flexibility and virus replication.

Authors:  Yongqian Zhao; Tingjin Sherryl Soh; Jie Zheng; Kitti Wing Ki Chan; Wint Wint Phoo; Chin Chin Lee; Moon Y F Tay; Kunchithapadam Swaminathan; Tobias C Cornvik; Siew Pheng Lim; Pei-Yong Shi; Julien Lescar; Subhash G Vasudevan; Dahai Luo
Journal:  PLoS Pathog       Date:  2015-03-16       Impact factor: 6.823

8.  Complete coding sequence of zika virus from a French polynesia outbreak in 2013.

Authors:  Cécile Baronti; Géraldine Piorkowski; Rémi N Charrel; Laetitia Boubis; Isabelle Leparc-Goffart; Xavier de Lamballerie
Journal:  Genome Announc       Date:  2014-06-05

9.  Cryo-EM structure of the mature dengue virus at 3.5-Å resolution.

Authors:  Xiaokang Zhang; Peng Ge; Xuekui Yu; Jennifer M Brannan; Guoqiang Bi; Qinfen Zhang; Stan Schein; Z Hong Zhou
Journal:  Nat Struct Mol Biol       Date:  2012-12-16       Impact factor: 15.369

10.  Mosquitoes inoculate high doses of West Nile virus as they probe and feed on live hosts.

Authors:  Linda M Styer; Kim A Kent; Rebecca G Albright; Corey J Bennett; Laura D Kramer; Kristen A Bernard
Journal:  PLoS Pathog       Date:  2007-09-14       Impact factor: 6.823

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  10 in total

1.  Label-Free Pathogen Detection by a Deoxyribozyme Cascade with Visual Signal Readout.

Authors:  Adam J Reed; Ryan P Connelly; Allison Williams; Maithi Tran; Byoung-Shik Shim; Hyeryun Choe; Yulia V Gerasimova
Journal:  Sens Actuators B Chem       Date:  2018-11-29       Impact factor: 7.460

Review 2.  Available Evidence of Association between Zika Virus and Microcephaly.

Authors:  Jing Wu; Da-Yong Huang; Jun-Tao Ma; Ying-Hua Ma; Yi-Fei Hu
Journal:  Chin Med J (Engl)       Date:  2016-10-05       Impact factor: 2.628

3.  An Approach for a Synthetic CTL Vaccine Design against Zika Flavivirus Using Class I and Class II Epitopes Identified by Computer Modeling.

Authors:  Edecio Cunha-Neto; Daniela S Rosa; Paul E Harris; Tim Olson; Alex Morrow; Serban Ciotlos; Charles V Herst; Reid Martin Rubsamen
Journal:  Front Immunol       Date:  2017-06-09       Impact factor: 7.561

4.  Meeting report: the 4th symposium on animal models of non-human primates in Kunming, Yunnan, China.

Authors:  Jia-Li Li; Yong-Tang Zheng; Xu-Dong Zhao; Xin-Tian Hu
Journal:  Zool Res       Date:  2016-11-18

Review 5.  Recent Perspectives on Genome, Transmission, Clinical Manifestation, Diagnosis, Therapeutic Strategies, Vaccine Developments, and Challenges of Zika Virus Research.

Authors:  Apoorva Shankar; Amulya A Patil; Sinosh Skariyachan
Journal:  Front Microbiol       Date:  2017-09-14       Impact factor: 5.640

6.  Immunogenicity and Protection Efficacy of a Naked Self-Replicating mRNA-Based Zika Virus Vaccine.

Authors:  Zifu Zhong; João Paulo Portela Catani; Séan Mc Cafferty; Liesbeth Couck; Wim Van Den Broeck; Nina Gorlé; Roosmarijn E Vandenbroucke; Bert Devriendt; Sebastian Ulbert; Lieselotte Cnops; Johan Michels; Kevin K Ariën; Niek N Sanders
Journal:  Vaccines (Basel)       Date:  2019-08-23

Review 7.  Challenges for molecular and serological ZIKV infection confirmation.

Authors:  Zilton Farias Meira de Vasconcelos; Renata Campos Azevedo; Nathália Thompson; Leonardo Gomes; Letícia Guida; Maria Elisabeth Lopes Moreira
Journal:  Childs Nerv Syst       Date:  2017-11-06       Impact factor: 1.532

8.  Identification of Potential Lead Molecules for Zika Envelope Protein from In Silico Perspective.

Authors:  Selvaa Kumar Chellasamy; Shine Devarajan
Journal:  Avicenna J Med Biotechnol       Date:  2019 Jan-Mar

Review 9.  Computer-Assisted and Data Driven Approaches for Surveillance, Drug Discovery, and Vaccine Design for the Zika Virus.

Authors:  Subhash C Basak; Subhabrata Majumdar; Ashesh Nandy; Proyasha Roy; Tathagata Dutta; Marjan Vracko; Apurba K Bhattacharjee
Journal:  Pharmaceuticals (Basel)       Date:  2019-10-16

10.  A Small-Plaque Isolate of the Zika Virus with Envelope Domain III Mutations Affect Viral Entry and Replication in Mammalian but Not Mosquito Cells.

Authors:  Thitigun Jaimipuk; Saranya Sachdev; Sutee Yoksan; Chutima Thepparit
Journal:  Viruses       Date:  2022-02-26       Impact factor: 5.048

  10 in total

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