Literature DB >> 27019282

Correction: Diversity of Intestinal Clostridium coccoides Group in the Japanese Population, as Demonstrated by Reverse Transcription-Quantitative PCR.

Takashi Kurakawa, Kiyohito Ogata, Kazunori Matsuda, Hirokazu Tsuji, Hiroyuki Kubota, Toshihiko Takada, Yukiko Kado, Takashi Asahara, Takuya Takahashi, Koji Nomoto.   

Abstract

Entities:  

Year:  2016        PMID: 27019282      PMCID: PMC4809554          DOI: 10.1371/journal.pone.0152753

Source DB:  PubMed          Journal:  PLoS One        ISSN: 1932-6203            Impact factor:   3.240


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There are multiple errors in the values for product size in Table 2, “Primer information.” Please see the corrected Table 2 here.
Table 2

Primer information.

group/speciesStandard StrainStrain No.Primer nameSequence (5'-3')Anealing Temp (°C)Product size (bp)
Clostridium coccoides groupBlautia productaJCM 1471Tg-Ccoc-FAAATGACGGTACCTGACTAA55440
g-Ccoc-RCTTTGAGTTTCATTCTTGCGAA
Eubacterium ventriosumEubacterium ventriosumATCC 27560Ts-Event-FGTCGGGGGACAATAGTTCC55451
s-Event-RATTTGCTTACCCTCACGGGG
Eubacterium halliiEubacterium halliiDSM 3353Ts-Ehal-FGTGTCGGGGCCGTATAGG55435
s-Ehal-RGTTCGCCTCACTCTGTGAC
Coprococcus eutactusCoprococcus eutactusATCC 27759Ts-Ceut-FCTGGAGCTTGCTCCGGCCGATTT55656
s-Ceut-RGTCAGTAGCAGTCCAGTAAGT
Eubacterium eligensEubacterium eligensDSM 3376Ts-Eeli-FTGTCGGGGCCCATAAGGG55189
s-Eeli-RCATTACTGTCCGGTCAGTG
Eubacterium rectaleEubacterium rectaleATCC 33656Ts-Erec-FTTCTGACCGGTACTTAACCGTACC55281
s-Erec-RTTTGCTCGGCTTCACAGCTTT
Eubacterium ramulusEubacterium ramulusATCC 29099Ts-Eram-FGAGCGTAGGCGGTCCTGC55452
s-Eram-RGGGAAAACACATTACATGTTCTG
Genus BlautiaBlautia productaJCM 1471Tg-Blau-FGTGAAGGAAGAAGTATCTCGG55559
g-Blau-RTTGGTAAGGTTCTTCGCGTT
Clostridium symbiosumClostridium symbiosumJCM 1297Ts-Csym-FTAAGCGCACAGTATTGCATGATA55816
s-Csym-RCGTTACTCCCCCGTCGAG
Fusicatenibacter saccharivoransFusicatenibacter saccharivoransJCM 18507Ts-Fsac-FCTGCATTGGAAACTGTCTGG55388
s-Fsac-RCGTTACGGGCCGGTCATC
Clostridium asparagiformeClostridium asparagiformeDSM 15981Ts-Casp-FGTTTTCGGATGGATTCTAGATG55568
s-Casp-RCTCCTGCACTCTAGCTTGA
Clostridium hathewayiClostridium hathewayiDSM 13479Ts-Chath-FCTTGACATCCCACTGAAAACAC55162
s-Chath-RAGAGTGCCCGACTCTACTC
Clostridium indolis subgroupClostridium indolisJCM 1380Tsg-Cind-FACCAAGTCTTGACATCGGAATGA55298
sg-Cind-RTTGCTCCAGATCGCTCCTT
Ruminococcus gnavusRuminococcus gnavusATCC 29149Ts-Rgna-FCTTGCTGGACGATGACTGAC55288
s-Rgna-RCTCCGATTAAAGAGCGGTCAGA
Anaerostipes caccaeAnaerostipes caccaeDSM 14662Ts-Acac-FGTTTTCGGATGGATTTCCTATAT55143
s-Acac-RCTTTTCACACTGAATCATGCGATT
Roseburia intestinalisRoseburia intestinalisDSM 14610Ts-Rint-FGCACAGGGTCGCATGACCT60818
s-Rint-RAACACATTACATGTTCTGTCATC
Coprococcus comesCoprococcus comesATCC 27758Ts-Ccom-FGTGACCGGCGTGTAATGACG55150
s-Ccom-RCAGAGTGCCCATCCGAATTG
Clostridium nexileClostridium nexileATCC 27757Ts-Cnex-FGGATTTCTTCGGATTGAAGTTTTT55517
s-Cnex-RTTTCACATCAGACTTACACAAC
Genus DoreaDorea formicigeneransDSM 3992Tg-Dor-FGCAGCTAACGCAATAAGCAG55165
g-Dor-RCTTCCATTACGAAGCGGTC
Clostridium scindensClostridium scindensJCM 6567Ts-Csci-FGCATTTGGAACTGCGTGG55387
s-Csci-RCGTTACGCGCTTTGGCATCG
Clostridium hylemonaeClostridium hylemonaeDSM 15053Ts-Chyl-FAAGAGATTAGCTTGCTAAGATCAG55145
s-Chyl-RTCTACCATGCGGTACTGAGGT
Ruminococcus torquesRuminococcus torquesATCC 17756Ts-Rtor-FCGAAGCACTTTGCTTAGA55528
s-Rtor-RACATCAGACTTGCCCATC
Ruminococcus lactarisRuminococcus lactarisATCC 19176Ts-Rlac-FGGGAGCGTAGACGGAGCA55452
s-Rlac-RAAGCAGACATTACTCTGCCG
  1 in total

1.  Diversity of Intestinal Clostridium coccoides Group in the Japanese Population, as Demonstrated by Reverse Transcription-Quantitative PCR.

Authors:  Takashi Kurakawa; Kiyohito Ogata; Kazunori Matsuda; Hirokazu Tsuji; Hiroyuki Kubota; Toshihiko Takada; Yukiko Kado; Takashi Asahara; Takuya Takahashi; Koji Nomoto
Journal:  PLoS One       Date:  2015-05-22       Impact factor: 3.240

  1 in total

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