Literature DB >> 27018803

Universality of supersaturation in protein-fiber formation.

Troy Cellmer1, Frank A Ferrone2, William A Eaton1.   

Abstract

The thermodynamics and kinetics of the aggregation of sickle-cell hemoglobin into fibers have been studied in great detail under a wide range of solution conditions. The stability of the fiber is measured by the solubility; the kinetics is characterized by a delay before the appearance of fibers. A review of data in the literature shows that there is no correlation of the delay time with fiber stability and only a weak correlation with the initial protein concentration. There is, however, a striking collapse of all the data onto a single universal curve when the delay time is plotted versus the supersaturation, which is the ratio of the initial protein concentration to the solubility, expressed as activities. Collapse onto the same universal curve is also obtained when using delay times calculated from the double-nucleation theoretical model.

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Year:  2016        PMID: 27018803      PMCID: PMC7329141          DOI: 10.1038/nsmb.3197

Source DB:  PubMed          Journal:  Nat Struct Mol Biol        ISSN: 1545-9985            Impact factor:   15.369


  43 in total

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Authors:  J Hofrichter; P D Ross; W A Eaton
Journal:  Proc Natl Acad Sci U S A       Date:  1976-09       Impact factor: 11.205

Review 2.  Introduction to protein crystallization.

Authors:  Alexander McPherson
Journal:  Methods       Date:  2004-11       Impact factor: 3.608

3.  Comparing a simple theoretical model for protein folding with all-atom molecular dynamics simulations.

Authors:  Eric R Henry; Robert B Best; William A Eaton
Journal:  Proc Natl Acad Sci U S A       Date:  2013-10-15       Impact factor: 11.205

Review 4.  The delay time in sickle cell disease after 40 years: A paradigm assessed.

Authors:  Frank A Ferrone
Journal:  Am J Hematol       Date:  2015-02-25       Impact factor: 10.047

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Authors:  W A Eaton; J Hofrichter
Journal:  Adv Protein Chem       Date:  1990

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Authors:  A Szabo
Journal:  Proc Natl Acad Sci U S A       Date:  1978-05       Impact factor: 11.205

7.  A 50th order reaction predicted and observed for sickle hemoglobin nucleation.

Authors:  Z Cao; F A Ferrone
Journal:  J Mol Biol       Date:  1996-02-23       Impact factor: 5.469

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Authors:  C T Noguchi; D A Torchia; A N Schechter
Journal:  J Clin Invest       Date:  1983-09       Impact factor: 14.808

9.  Kinetics of sickle hemoglobin polymerization. II. A double nucleation mechanism.

Authors:  F A Ferrone; J Hofrichter; W A Eaton
Journal:  J Mol Biol       Date:  1985-06-25       Impact factor: 5.469

10.  Widespread aggregation and neurodegenerative diseases are associated with supersaturated proteins.

Authors:  Prajwal Ciryam; Gian Gaetano Tartaglia; Richard I Morimoto; Christopher M Dobson; Michele Vendruscolo
Journal:  Cell Rep       Date:  2013-10-31       Impact factor: 9.423

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  17 in total

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Authors:  Tigist Kassa; M B Strader; Akito Nakagawa; Warren M Zapol; Abdu I Alayash
Journal:  Metallomics       Date:  2017-09-20       Impact factor: 4.526

2.  Aggregation landscapes of Huntingtin exon 1 protein fragments and the critical repeat length for the onset of Huntington's disease.

Authors:  Mingchen Chen; Peter G Wolynes
Journal:  Proc Natl Acad Sci U S A       Date:  2017-04-11       Impact factor: 11.205

3.  Surveying the Energy Landscapes of Aβ Fibril Polymorphism.

Authors:  Mingchen Chen; Nicholas P Schafer; Peter G Wolynes
Journal:  J Phys Chem B       Date:  2018-10-01       Impact factor: 2.991

Review 4.  Treating sickle cell disease by targeting HbS polymerization.

Authors:  William A Eaton; H Franklin Bunn
Journal:  Blood       Date:  2017-04-06       Impact factor: 22.113

5.  Kinetic assay shows that increasing red cell volume could be a treatment for sickle cell disease.

Authors:  Quan Li; Eric R Henry; James Hofrichter; Jeffrey F Smith; Troy Cellmer; Emily B Dunkelberger; Belhu B Metaferia; Stacy Jones-Straehle; Sarah Boutom; Garrott W Christoph; Terri H Wakefield; Mary E Link; Dwayne Staton; Erica R Vass; Jeffery L Miller; Matthew M Hsieh; John F Tisdale; William A Eaton
Journal:  Proc Natl Acad Sci U S A       Date:  2017-01-17       Impact factor: 11.205

6.  Solid nuclei and liquid droplets: A parallel treatment for 3 phase systems.

Authors:  Frank A Ferrone
Journal:  Protein Sci       Date:  2018-06-13       Impact factor: 6.725

7.  Theoretical Simulation of Red Cell Sickling Upon Deoxygenation Based on the Physical Chemistry of Sickle Hemoglobin Fiber Formation.

Authors:  Emily B Dunkelberger; Belhu Metaferia; Troy Cellmer; Eric R Henry
Journal:  J Phys Chem B       Date:  2018-09-18       Impact factor: 2.991

Review 8.  Impact of hemoglobin biophysical studies on molecular pathogenesis and drug therapy for sickle cell disease.

Authors:  William A Eaton
Journal:  Mol Aspects Med       Date:  2021-07-14

9.  Does liquid-liquid phase separation drive peptide folding?

Authors:  Dean N Edun; Meredith R Flanagan; Arnaldo L Serrano
Journal:  Chem Sci       Date:  2020-12-29       Impact factor: 9.825

Review 10.  Research in Sickle Cell Disease: From Bedside to Bench to Bedside.

Authors:  Gabriel Salinas Cisneros; Swee Lay Thein
Journal:  Hemasphere       Date:  2021-06-01
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