Literature DB >> 27014737

Dataset of STAT5A status in breast cancer.

Utpal K Mukhopadhyay1, Jamaica Cass1, Leda Raptis1, Andrew W Craig2, Véronique Bourdeau3, Sonal Varma1, Sandip Sen Gupta1, Bruce E Elliott1, Gerardo Ferbeyre3.   

Abstract

We analysed STAT5A gene expression in breast cancer using the Oncomine database. We exemplify four representative studies showing that STAT5A is generally downregulated in breast cancer.

Entities:  

Year:  2016        PMID: 27014737      PMCID: PMC4792860          DOI: 10.1016/j.dib.2016.02.073

Source DB:  PubMed          Journal:  Data Brief        ISSN: 2352-3409


Specifications Table

Value of the data

We show that in different independent studies STAT5A is downregulated in breast cancer. The downregulation of STAT5A supports a tumour suppressor role for STAT5A in breast cancer and is consistent with our recent discovery that STAT5A is a p53-target gene [2]. High levels of STAT5A indicate a good prognosis in breast cancer and it assessment can be used in the clinics as part of a multigene prognostic test (Fig. 1).
Fig. 1

Downregulation of STAT5A expression in breast cancer (from Oncomine).

Downregulation of STAT5A expression in breast cancer (from Oncomine).

Data

We show that STAT5A is downregulated in breast cancer using several large-scale gene expression analyses available at Oncomine: https://www.oncomine.org/resource/main.html [1].

Experimental design, materials and methods

We used the publicly available Oncomine search to find the status of STAT5A in breast cancer.
Subject areaBiology
More specific subject areaCancer
Type of dataFigure
How data was acquiredDatabase Oncomine[1]
Data formatFiltered and analyzed
Experimental factorsNot applicable
Experimental featuresWe query Oncomine for STAT5A and breast cancer
Data source locationMontréal, Québec
Data accessibilityData is within this article.
  2 in total

1.  STAT5A is regulated by DNA damage via the tumor suppressor p53.

Authors:  Utpal K Mukhopadhyay; Jamaica Cass; Leda Raptis; Andrew W Craig; Véronique Bourdeau; Sonal Varma; Sandip SenGupta; Bruce E Elliott; Gerardo Ferbeyre
Journal:  Cytokine       Date:  2016-02-11       Impact factor: 3.861

2.  Oncomine 3.0: genes, pathways, and networks in a collection of 18,000 cancer gene expression profiles.

Authors:  Daniel R Rhodes; Shanker Kalyana-Sundaram; Vasudeva Mahavisno; Radhika Varambally; Jianjun Yu; Benjamin B Briggs; Terrence R Barrette; Matthew J Anstet; Colleen Kincead-Beal; Prakash Kulkarni; Sooryanaryana Varambally; Debashis Ghosh; Arul M Chinnaiyan
Journal:  Neoplasia       Date:  2007-02       Impact factor: 5.715

  2 in total

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