Literature DB >> 27012500

Joint analysis of spikes and local field potentials using copula.

Meng Hu1, Mingyao Li2, Wu Li3, Hualou Liang4.   

Abstract

Recent technological advances, which allow for simultaneous recording of spikes and local field potentials (LFPs) at multiple sites in a given cortical area or across different areas, have greatly increased our understanding of signal processing in brain circuits. Joint analysis of simultaneously collected spike and LFP signals is an important step to explicate how the brain orchestrates information processing. In this contribution, we present a novel statistical framework based on Gaussian copula to jointly model spikes and LFP. In our approach, we use copula to link separate, marginal regression models to construct a joint regression model, in which the binary-valued spike train data are modeled using generalized linear model (GLM) and the continuous-valued LFP data are modeled using linear regression. Model parameters can be efficiently estimated via maximum-likelihood. In particular, we show that our model offers a means to statistically detect directional influence between spikes and LFP, akin to Granger causality measure, and that we are able to assess its statistical significance by conducting a Wald test. Through extensive simulations, we also show that our method is able to reliably recover the true model used to generate the data. To demonstrate the effectiveness of our approach in real setting, we further apply the method to a mixed neural dataset, consisting of spikes and LFP simultaneously recorded from the visual cortex of a monkey performing a contour detection task.
Copyright © 2016 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Copula; Generalized linear model; Local field potentials; Neural data analysis; Spike trains

Mesh:

Year:  2016        PMID: 27012500     DOI: 10.1016/j.neuroimage.2016.03.030

Source DB:  PubMed          Journal:  Neuroimage        ISSN: 1053-8119            Impact factor:   6.556


  3 in total

1.  Relationship between cortical state and spiking activity in the lateral geniculate nucleus of marmosets.

Authors:  Alexander N J Pietersen; Soon Keen Cheong; Brandon Munn; Pulin Gong; Paul R Martin; Samuel G Solomon
Journal:  J Physiol       Date:  2017-03-10       Impact factor: 5.182

2.  Time-series cohort study to forecast emergency department visits in the city of Milan and predict high demand: a 2-day warning system.

Authors:  Rossella Murtas; Sara Tunesi; Anita Andreano; Antonio Giampiero Russo
Journal:  BMJ Open       Date:  2022-04-26       Impact factor: 3.006

3.  Data on copula modeling of mixed discrete and continuous neural time series.

Authors:  Meng Hu; Mingyao Li; Wu Li; Hualou Liang
Journal:  Data Brief       Date:  2016-04-13
  3 in total

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