Literature DB >> 27010360

Role of genome guardian proteins in transcriptional elongation.

Heeyoun Bunch1.   

Abstract

Maintaining genomic integrity is vital for cell survival and homeostasis. Mutations in critical genes in germ-line and somatic cells are often implicated with the onset or progression of diseases. DNA repair enzymes thus take important roles as guardians of the genome in the cell. Besides the known function to repair DNA damage, recent findings indicate that DNA repair enzymes regulate the transcription of protein-coding and noncoding RNA genes. In particular, a novel role of DNA damage response signaling has been identified in the regulation of transcriptional elongation. Topoisomerases-mediated DNA breaks appear important for the regulation. In this review, recent findings of these DNA break- and repair-associated enzymes in transcription and potential roles of transcriptional activation-coupled DNA breaks are discussed.
© 2016 Federation of European Biochemical Societies.

Keywords:  DNA repair enzymes; topoisomerases; transcriptional elongation

Mesh:

Substances:

Year:  2016        PMID: 27010360     DOI: 10.1002/1873-3468.12152

Source DB:  PubMed          Journal:  FEBS Lett        ISSN: 0014-5793            Impact factor:   4.124


  11 in total

Review 1.  Gene regulation of mammalian long non-coding RNA.

Authors:  Heeyoun Bunch
Journal:  Mol Genet Genomics       Date:  2017-09-11       Impact factor: 3.291

2.  At the Interface of Three Nucleic Acids: The Role of RNA-Binding Proteins and Poly(ADP-ribose) in DNA Repair.

Authors:  E E Alemasova; O I Lavrik
Journal:  Acta Naturae       Date:  2017 Apr-Jun       Impact factor: 1.845

3.  P-TEFb Regulates Transcriptional Activation in Non-coding RNA Genes.

Authors:  Heeyoun Bunch; Hyeseung Choe; Jongbum Kim; Doo Sin Jo; Soyeon Jeon; Sanghwa Lee; Dong-Hyung Cho; Keunsoo Kang
Journal:  Front Genet       Date:  2019-04-24       Impact factor: 4.599

4.  Trypanosoma brucei ribonuclease H2A is an essential R-loop processing enzyme whose loss causes DNA damage during transcription initiation and antigenic variation.

Authors:  Emma Briggs; Kathryn Crouch; Leandro Lemgruber; Graham Hamilton; Craig Lapsley; Richard McCulloch
Journal:  Nucleic Acids Res       Date:  2019-09-26       Impact factor: 16.971

5.  Anti-vimentin, anti-TUFM, anti-NAP1L1 and anti-DPYSL2 nanobodies display cytotoxic effect and reduce glioblastoma cell migration.

Authors:  Alja Zottel; Ivana Jovčevska; Neja Šamec; Jernej Mlakar; Jernej Šribar; Igor Križaj; Marija Skoblar Vidmar; Radovan Komel
Journal:  Ther Adv Med Oncol       Date:  2020-04-28       Impact factor: 8.168

6.  Changes to the TDP-43 and FUS Interactomes Induced by DNA Damage.

Authors:  Tetsuya Kawaguchi; Matthew G Rollins; Mahta Moinpour; Andres A Morera; Christopher C Ebmeier; William M Old; Jacob C Schwartz
Journal:  J Proteome Res       Date:  2019-12-02       Impact factor: 5.370

Review 7.  Phosphorylation Targets of DNA-PK and Their Role in HIV-1 Replication.

Authors:  Andrey Anisenko; Marina Kan; Olga Shadrina; Anna Brattseva; Marina Gottikh
Journal:  Cells       Date:  2020-08-16       Impact factor: 6.600

8.  Arsenic hexoxide has differential effects on cell proliferation and genome-wide gene expression in human primary mammary epithelial and MCF7 cells.

Authors:  Donguk Kim; Na Yeon Park; Keunsoo Kang; Stuart K Calderwood; Dong-Hyung Cho; Ill Ju Bae; Heeyoun Bunch
Journal:  Sci Rep       Date:  2021-02-12       Impact factor: 4.379

9.  Alternative DNA secondary structure formation affects RNA polymerase II promoter-proximal pausing in human.

Authors:  Karol Szlachta; Ryan G Thys; Naomi D Atkin; Levi C T Pierce; Stefan Bekiranov; Yuh-Hwa Wang
Journal:  Genome Biol       Date:  2018-07-12       Impact factor: 13.583

Review 10.  Type II DNA Topoisomerases Cause Spontaneous Double-Strand Breaks in Genomic DNA.

Authors:  Suguru Morimoto; Masataka Tsuda; Heeyoun Bunch; Hiroyuki Sasanuma; Caroline Austin; Shunichi Takeda
Journal:  Genes (Basel)       Date:  2019-10-30       Impact factor: 4.096

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