| Literature DB >> 27006808 |
Charalampos Triantis1, Antonio Shegani1, Christos Kiritsis1, Catherine Raptopoulou2, Vassilis Psycharis2, Maria Pelecanou3, Ioannis Pirmettis1, Minas Papadopoulos1.
Abstract
In the title compound, [Re(C10H6NO2)(C7H11N)(CO)3], the Re(I) atom is coordinated by three carbonyl ligands in a facial arrangement and by the N, O and C atoms from a chelating quinaldate anion and a monodentate isocyanide ligand, respectively. The resultant C4NO coordination sphere is distorted octa-hedral. A lengthening of the axial Re-CO bond trans to the isocyanide ligand is indicative of the trans effect. Individual complexes are stacked into rods parallel to [001] through displaced π-π inter-actions. Weak C-H⋯O hydrogen-bonding inter-actions between the rods lead to the formation of layers parallel to (010). These layers are stacked along [010] by C-H⋯H-C van der Waals contacts.Entities:
Keywords: Hirshfeld surface analysis; crystal structure; rhenium(I) cyclohexyl isocyanide and quinaldic acid complex; rhenium(I) tricarbonyl complex; structural trans effect
Year: 2016 PMID: 27006808 PMCID: PMC4778812 DOI: 10.1107/S2056989016002206
Source DB: PubMed Journal: Acta Crystallogr E Crystallogr Commun
Figure 1The molecular structure and atom-labelling scheme of the title compound. Displacement ellipsoids are drawn at the 50% probability level.
Figure 2Intermolecular interactions of the title complex with its neighbours. π–π interactions, weak C—H⋯O hydrogen bonds and short van der Waals contacts are shown with green, orange and turquoise dashed lines, respectively. [Symmetry codes: (′) x + 1, y, z; (′′) 1 + x, − y, − + z; (′′′) 4 − x,1 − y, 2 − z.]
Figure 3A rod of complexes extending parallel to [001] through π–π interactions. The colour code is as in Fig. 2 ▸.
Figure 4Sheet of complexes arranged parallel to (010) showing π–π and weak C—H⋯O interactions. The colour code is as in Fig. 2 ▸.
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| C20—H20 | 0.99 | 2.61 | 3.260 (10) | 123 |
| C15—H15⋯O2i | 0.99 | 2.52 | 3.365 | 142 |
| C7—H7⋯O2ii | 0.99 | 2.37 | 3.133 | 137 |
Symmetry codes: (i) ; (ii) .
Figure 5Stack of layers along [010] with C—H⋯H—C van der Waals contacts (light-blue dashed lines) developed among them, shown along the opposite [20] direction (see Fig. 4 ▸).
Figure 6Views of Hirshfeld surfaces mapped with d norm (a)/(b), curvedness (c) properties and (d) fingerprint plots for the title complex. d e and d i are the distances to the nearest atom centre exterior and interior to the surface. 1, 2, 3 and 4 indicate H⋯H, H⋯O, C⋯H and C⋯C interactions, and A and B stand for acceptor and donor atoms, respectively.
Experimental details
| Crystal data | |
| Chemical formula | [Re(C10H6NO2)(C7H11N)(CO)3] |
|
| 551.55 |
| Crystal system, space group | Monoclinic, |
| Temperature (K) | 170 |
|
| 7.1529 (1), 29.5703 (5), 9.6309 (2) |
| β (°) | 105.572 (1) |
|
| 1962.29 (6) |
|
| 4 |
| Radiation type | Cu |
| μ (mm−1) | 12.41 |
| Crystal size (mm) | 0.49 × 0.12 × 0.04 |
| Data collection | |
| Diffractometer | Rigaku R-AXIS SPIDER |
| Absorption correction | Multi-scan ( |
|
| 0.374, 1.000 |
| No. of measured, independent and observed [ | 21436, 3283, 2723 |
|
| 0.069 |
| (sin θ/λ)max (Å−1) | 0.588 |
| Refinement | |
|
| 0.038, 0.102, 1.17 |
| No. of reflections | 3283 |
| No. of parameters | 253 |
| H-atom treatment | H-atom parameters constrained |
| Δρmax, Δρmin (e Å−3) | 1.30, −1.43 |
Computer programs: CrystalClear (Rigaku, 2005 ▸), SHELXS97 and SHELXTL (Sheldrick, 2008 ▸), SHELXL2014 (Sheldrick, 2015 ▸), DIAMOND (Crystal Impact, 2012 ▸) and PLATON (Spek, 2009 ▸).
| [Re(C10H6NO2)(C7H11N)(CO)3] | |
| Monoclinic, | Cu |
| Cell parameters from 17036 reflections | |
| θ = 6.6–71.9° | |
| µ = 12.41 mm−1 | |
| β = 105.572 (1)° | |
| Parallelepiped, colorless | |
| 0.49 × 0.12 × 0.04 mm |
| Rigaku R-AXIS SPIDER IPDS diffractometer | 2723 reflections with |
| Radiation source: fine-focus sealed tube | |
| θ scans | θmax = 65.0°, θmin = 6.6° |
| Absorption correction: multi-scan ( | |
| 21436 measured reflections | |
| 3283 independent reflections |
| Refinement on | 0 restraints |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H-atom parameters constrained | |
| (Δ/σ)max = 0.001 | |
| 3283 reflections | Δρmax = 1.30 e Å−3 |
| 253 parameters | Δρmin = −1.43 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Re | 0.92831 (4) | 0.37585 (2) | 0.37372 (3) | 0.03094 (14) | |
| N1 | 0.9723 (7) | 0.30250 (18) | 0.4300 (5) | 0.0284 (12) | |
| O1 | 0.7817 (7) | 0.36522 (17) | 0.5387 (5) | 0.0416 (12) | |
| O2 | 0.6499 (7) | 0.31296 (18) | 0.6478 (5) | 0.0484 (13) | |
| C1 | 0.7486 (9) | 0.3239 (2) | 0.5673 (7) | 0.0355 (16) | |
| C2 | 0.8488 (9) | 0.2879 (2) | 0.5021 (6) | 0.0301 (14) | |
| C3 | 0.8153 (10) | 0.2429 (2) | 0.5234 (7) | 0.0346 (15) | |
| H3 | 0.7263 | 0.2344 | 0.5762 | 0.042* | |
| C4 | 0.9110 (9) | 0.2111 (2) | 0.4680 (7) | 0.0364 (16) | |
| H4 | 0.8825 | 0.1799 | 0.4757 | 0.044* | |
| C5 | 1.0531 (9) | 0.2242 (2) | 0.3988 (7) | 0.0350 (16) | |
| C6 | 1.1665 (10) | 0.1931 (2) | 0.3467 (7) | 0.0413 (17) | |
| H6 | 1.1444 | 0.1616 | 0.3549 | 0.050* | |
| C7 | 1.3075 (10) | 0.2069 (3) | 0.2848 (7) | 0.0421 (18) | |
| H7 | 1.3827 | 0.1855 | 0.2496 | 0.051* | |
| C8 | 1.3385 (10) | 0.2532 (2) | 0.2742 (7) | 0.0395 (17) | |
| H8 | 1.4385 | 0.2629 | 0.2332 | 0.047* | |
| C9 | 1.2302 (9) | 0.2851 (2) | 0.3207 (6) | 0.0344 (15) | |
| H9 | 1.2542 | 0.3164 | 0.3112 | 0.041* | |
| C10 | 1.0834 (8) | 0.2709 (2) | 0.3826 (6) | 0.0279 (14) | |
| C11 | 0.6948 (11) | 0.3602 (2) | 0.2213 (8) | 0.0386 (16) | |
| O3 | 0.5615 (7) | 0.3509 (2) | 0.1301 (6) | 0.0588 (16) | |
| C12 | 0.8592 (10) | 0.4384 (3) | 0.3514 (8) | 0.0419 (17) | |
| O4 | 0.8223 (8) | 0.47647 (18) | 0.3391 (6) | 0.0549 (14) | |
| C13 | 1.0602 (10) | 0.3846 (2) | 0.2285 (8) | 0.0381 (17) | |
| O5 | 1.1396 (8) | 0.39159 (19) | 0.1404 (6) | 0.0529 (13) | |
| C14 | 1.1806 (11) | 0.3915 (2) | 0.5378 (8) | 0.0381 (16) | |
| N2 | 1.3213 (8) | 0.40084 (19) | 0.6200 (6) | 0.0353 (13) | |
| C15 | 1.5026 (9) | 0.4170 (2) | 0.7131 (7) | 0.0365 (16) | |
| H15 | 1.5983 | 0.3916 | 0.7321 | 0.044* | |
| C16 | 1.4738 (12) | 0.4329 (3) | 0.8551 (7) | 0.057 (2) | |
| H16A | 1.4335 | 0.4071 | 0.9061 | 0.068* | |
| H16B | 1.3704 | 0.4561 | 0.8376 | 0.068* | |
| C17 | 1.6631 (17) | 0.4527 (4) | 0.9473 (10) | 0.098 (4) | |
| H17A | 1.6427 | 0.4645 | 1.0384 | 0.117* | |
| H17B | 1.7629 | 0.4287 | 0.9717 | 0.117* | |
| C18 | 1.7339 (18) | 0.4906 (4) | 0.8689 (17) | 0.133 (6) | |
| H18A | 1.6382 | 0.5155 | 0.8505 | 0.160* | |
| H18B | 1.8582 | 0.5024 | 0.9302 | 0.160* | |
| C19 | 1.7628 (14) | 0.4744 (4) | 0.7288 (17) | 0.111 (5) | |
| H19A | 1.8662 | 0.4512 | 0.7479 | 0.133* | |
| H19B | 1.8056 | 0.5001 | 0.6788 | 0.133* | |
| C20 | 1.5778 (10) | 0.4546 (3) | 0.6321 (9) | 0.055 (2) | |
| H20A | 1.6038 | 0.4421 | 0.5437 | 0.066* | |
| H20B | 1.4784 | 0.4786 | 0.6032 | 0.066* |
| Re | 0.0284 (2) | 0.0315 (2) | 0.0323 (2) | 0.00254 (11) | 0.00704 (15) | 0.00250 (11) |
| N1 | 0.025 (3) | 0.034 (3) | 0.024 (3) | 0.003 (2) | 0.003 (2) | 0.002 (2) |
| O1 | 0.044 (3) | 0.041 (3) | 0.046 (3) | 0.011 (2) | 0.022 (2) | 0.004 (2) |
| O2 | 0.050 (3) | 0.055 (3) | 0.051 (3) | 0.007 (3) | 0.032 (3) | 0.007 (3) |
| C1 | 0.031 (4) | 0.037 (4) | 0.036 (4) | 0.007 (3) | 0.006 (3) | −0.002 (3) |
| C2 | 0.023 (3) | 0.035 (4) | 0.029 (3) | 0.002 (3) | 0.001 (3) | −0.001 (3) |
| C3 | 0.038 (4) | 0.040 (4) | 0.029 (3) | 0.001 (3) | 0.015 (3) | 0.003 (3) |
| C4 | 0.037 (4) | 0.028 (4) | 0.041 (4) | −0.001 (3) | 0.007 (3) | 0.002 (3) |
| C5 | 0.027 (3) | 0.040 (4) | 0.034 (4) | 0.002 (3) | −0.001 (3) | −0.005 (3) |
| C6 | 0.044 (4) | 0.029 (4) | 0.048 (4) | 0.007 (3) | 0.007 (3) | −0.005 (3) |
| C7 | 0.033 (4) | 0.049 (5) | 0.046 (4) | 0.007 (3) | 0.014 (3) | −0.005 (4) |
| C8 | 0.031 (4) | 0.049 (5) | 0.040 (4) | 0.005 (3) | 0.012 (3) | −0.004 (3) |
| C9 | 0.027 (3) | 0.044 (4) | 0.032 (3) | 0.002 (3) | 0.008 (3) | 0.006 (3) |
| C10 | 0.023 (3) | 0.034 (4) | 0.023 (3) | 0.005 (3) | −0.001 (3) | 0.001 (3) |
| C11 | 0.047 (4) | 0.031 (4) | 0.042 (4) | 0.002 (3) | 0.019 (4) | 0.006 (3) |
| O3 | 0.038 (3) | 0.059 (4) | 0.066 (4) | −0.003 (3) | −0.010 (3) | 0.001 (3) |
| C12 | 0.032 (4) | 0.049 (5) | 0.044 (4) | −0.006 (4) | 0.008 (3) | −0.001 (4) |
| O4 | 0.063 (4) | 0.036 (3) | 0.067 (4) | 0.010 (3) | 0.021 (3) | 0.013 (3) |
| C13 | 0.036 (4) | 0.033 (4) | 0.042 (4) | 0.001 (3) | 0.004 (4) | 0.004 (3) |
| O5 | 0.052 (3) | 0.057 (4) | 0.055 (3) | −0.004 (3) | 0.024 (3) | 0.008 (3) |
| C14 | 0.042 (4) | 0.028 (4) | 0.044 (4) | 0.004 (3) | 0.012 (4) | 0.001 (3) |
| N2 | 0.039 (3) | 0.036 (3) | 0.032 (3) | −0.003 (3) | 0.009 (3) | −0.002 (2) |
| C15 | 0.034 (4) | 0.035 (4) | 0.038 (4) | 0.003 (3) | 0.005 (3) | −0.004 (3) |
| C16 | 0.077 (6) | 0.055 (6) | 0.029 (4) | 0.013 (5) | −0.002 (4) | −0.005 (4) |
| C17 | 0.123 (9) | 0.068 (7) | 0.064 (6) | 0.021 (7) | −0.042 (6) | −0.025 (5) |
| C18 | 0.093 (9) | 0.073 (9) | 0.172 (14) | −0.017 (7) | −0.072 (9) | −0.035 (9) |
| C19 | 0.051 (6) | 0.066 (8) | 0.203 (15) | −0.020 (5) | 0.009 (8) | 0.001 (9) |
| C20 | 0.047 (5) | 0.037 (5) | 0.085 (7) | −0.005 (3) | 0.023 (5) | 0.012 (4) |
| Re—C13 | 1.903 (8) | C9—C10 | 1.404 (8) |
| Re—C12 | 1.912 (8) | C9—H9 | 0.9500 |
| Re—C11 | 1.960 (8) | C11—O3 | 1.144 (8) |
| Re—C14 | 2.107 (8) | C12—O4 | 1.155 (8) |
| Re—O1 | 2.149 (5) | C13—O5 | 1.159 (8) |
| Re—N1 | 2.237 (5) | C14—N2 | 1.135 (8) |
| N1—C2 | 1.333 (8) | N2—C15 | 1.446 (8) |
| N1—C10 | 1.380 (7) | C15—C16 | 1.512 (9) |
| O1—C1 | 1.289 (8) | C15—C20 | 1.537 (9) |
| O2—C1 | 1.224 (8) | C15—H15 | 1.0000 |
| C1—C2 | 1.510 (9) | C16—C17 | 1.523 (12) |
| C2—C3 | 1.376 (9) | C16—H16A | 0.9900 |
| C3—C4 | 1.356 (9) | C16—H16B | 0.9900 |
| C3—H3 | 0.9500 | C17—C18 | 1.512 (17) |
| C4—C5 | 1.411 (9) | C17—H17A | 0.9900 |
| C4—H4 | 0.9500 | C17—H17B | 0.9900 |
| C5—C6 | 1.405 (9) | C18—C19 | 1.496 (17) |
| C5—C10 | 1.413 (9) | C18—H18A | 0.9900 |
| C6—C7 | 1.365 (9) | C18—H18B | 0.9900 |
| C6—H6 | 0.9500 | C19—C20 | 1.516 (13) |
| C7—C8 | 1.394 (10) | C19—H19A | 0.9900 |
| C7—H7 | 0.9500 | C19—H19B | 0.9900 |
| C8—C9 | 1.371 (9) | C20—H20A | 0.9900 |
| C8—H8 | 0.9500 | C20—H20B | 0.9900 |
| C13—Re—C12 | 87.2 (3) | C10—C9—H9 | 120.5 |
| C13—Re—C11 | 88.4 (3) | N1—C10—C9 | 120.1 (6) |
| C12—Re—C11 | 90.1 (3) | N1—C10—C5 | 120.4 (6) |
| C13—Re—C14 | 91.6 (3) | C9—C10—C5 | 119.6 (6) |
| C12—Re—C14 | 90.9 (3) | O3—C11—Re | 178.3 (6) |
| C11—Re—C14 | 179.1 (3) | O4—C12—Re | 178.3 (7) |
| C13—Re—O1 | 179.2 (2) | O5—C13—Re | 177.4 (6) |
| C12—Re—O1 | 93.5 (2) | N2—C14—Re | 175.9 (6) |
| C11—Re—O1 | 91.8 (2) | C14—N2—C15 | 173.2 (7) |
| C14—Re—O1 | 88.1 (2) | N2—C15—C16 | 110.3 (6) |
| C13—Re—N1 | 104.1 (2) | N2—C15—C20 | 107.6 (5) |
| C12—Re—N1 | 168.7 (2) | C16—C15—C20 | 112.7 (6) |
| C11—Re—N1 | 89.4 (2) | N2—C15—H15 | 108.7 |
| C14—Re—N1 | 89.7 (2) | C16—C15—H15 | 108.7 |
| O1—Re—N1 | 75.16 (18) | C20—C15—H15 | 108.7 |
| C2—N1—C10 | 118.3 (5) | C15—C16—C17 | 109.4 (8) |
| C2—N1—Re | 111.7 (4) | C15—C16—H16A | 109.8 |
| C10—N1—Re | 129.2 (4) | C17—C16—H16A | 109.8 |
| C1—O1—Re | 116.8 (4) | C15—C16—H16B | 109.8 |
| O2—C1—O1 | 123.8 (6) | C17—C16—H16B | 109.8 |
| O2—C1—C2 | 119.8 (6) | H16A—C16—H16B | 108.2 |
| O1—C1—C2 | 116.4 (6) | C18—C17—C16 | 111.0 (8) |
| N1—C2—C3 | 123.8 (6) | C18—C17—H17A | 109.4 |
| N1—C2—C1 | 116.4 (6) | C16—C17—H17A | 109.4 |
| C3—C2—C1 | 119.8 (6) | C18—C17—H17B | 109.4 |
| C4—C3—C2 | 119.1 (6) | C16—C17—H17B | 109.4 |
| C4—C3—H3 | 120.4 | H17A—C17—H17B | 108.0 |
| C2—C3—H3 | 120.4 | C19—C18—C17 | 111.2 (10) |
| C3—C4—C5 | 119.8 (6) | C19—C18—H18A | 109.4 |
| C3—C4—H4 | 120.1 | C17—C18—H18A | 109.4 |
| C5—C4—H4 | 120.1 | C19—C18—H18B | 109.4 |
| C6—C5—C4 | 123.1 (7) | C17—C18—H18B | 109.4 |
| C6—C5—C10 | 118.7 (6) | H18A—C18—H18B | 108.0 |
| C4—C5—C10 | 118.2 (6) | C18—C19—C20 | 111.6 (9) |
| C7—C6—C5 | 121.7 (7) | C18—C19—H19A | 109.3 |
| C7—C6—H6 | 119.2 | C20—C19—H19A | 109.3 |
| C5—C6—H6 | 119.2 | C18—C19—H19B | 109.3 |
| C6—C7—C8 | 118.4 (7) | C20—C19—H19B | 109.3 |
| C6—C7—H7 | 120.8 | H19A—C19—H19B | 108.0 |
| C8—C7—H7 | 120.8 | C19—C20—C15 | 109.5 (8) |
| C9—C8—C7 | 122.6 (7) | C19—C20—H20A | 109.8 |
| C9—C8—H8 | 118.7 | C15—C20—H20A | 109.8 |
| C7—C8—H8 | 118.7 | C19—C20—H20B | 109.8 |
| C8—C9—C10 | 119.0 (7) | C15—C20—H20B | 109.8 |
| C8—C9—H9 | 120.5 | H20A—C20—H20B | 108.2 |
| H··· | ||||
| C20—H20 | 0.99 | 2.61 | 3.260 (10) | 123 |
| C15—H15···O2i | 0.99 | 2.52 | 3.365 | 142 |
| C7—H7···O2ii | 0.99 | 2.37 | 3.133 | 137 |