Literature DB >> 27003155

NGS-based BRCA1/2 mutation testing of high-grade serous ovarian cancer tissue: results and conclusions of the first international round robin trial.

Volker Endris1, Albrecht Stenzinger1, Nicole Pfarr1,2, Roland Penzel1, Markus Möbs3, Dido Lenze3, Silvia Darb-Esfahani3, Michael Hummel3, Andreas Jung4, Ulrich Lehmann5, Hans Kreipe5, Thomas Kirchner4, Reinhard Büttner6, Wolfram Jochum7, Gerald Höfler8, Manfred Dietel3, Wilko Weichert1,2, Peter Schirmacher9.   

Abstract

With the approval of olaparib as monotherapy treatment in platinum-sensitive, relapsed high-grade serous ovarian cancer by the European Medical Agency (EMA), comprehensive genotyping of BRCA1 and BRCA2 in tumor tissue has become a mandatory pre-therapeutic test. This requires significant advances in routine tumor test methodologies due to the large size of both genes and the lack of mutational hot spots. Classical focused screening approaches, like Sanger sequencing, do not allow for a sensitive, rapid, and economic analysis of tumor tissue. Next-generation sequencing (NGS) approaches employing targeted panels for BRCA1/2 to interrogate formalin-fixed and paraffin-embedded tumor samples from either surgical resection or biopsy specimens can overcome these limitations. Although focused NGS methods have been implemented by few centers in routine molecular diagnostics for the analysis of some druggable oncogenic mutations, the reliable diagnostic testing of the entire coding regions of BRCA1 and BRCA2 was a new challenge requiring extensive technological improvement and quality management. Here, we describe the implementation and results of the first round robin trial for BRCA1/2 mutation testing in tumor tissue that was conducted in central Europe on May 2015, shortly after the approval and prior to the official release of olaparib. The high success rate of 81 % (21/26 test centers) demonstrates that BRCA1/2 multicenter mutation testing is well feasible in FFPE tumor tissue, extending to other tumor entities beyond ovarian cancer. The high number of test centers passing the trial demonstrates the success of the concerted efforts by German, Swiss, and Austrian pathology centers to ensure quality-controlled NGS-based testing and proves the potential of this technology in routine molecular pathology. On the basis of our results, we provide recommendations for predictive testing of tumor tissue for BRCA1/2 to clinical decision making in ovarian cancer patients.

Entities:  

Keywords:  BRCA1BRCA2; FFPE; Next-generation sequencing; Olaparib; Ovarian cancer; PARP; Tumor tissue

Mesh:

Substances:

Year:  2016        PMID: 27003155     DOI: 10.1007/s00428-016-1919-8

Source DB:  PubMed          Journal:  Virchows Arch        ISSN: 0945-6317            Impact factor:   4.064


  25 in total

1.  Reproducibility and prognostic value of histologic type and grade in early epithelial ovarian cancer.

Authors:  K. Bertelsen; B. Hølund; E. Andersen
Journal:  Int J Gynecol Cancer       Date:  1993-03       Impact factor: 3.437

2.  Accuracy of BRCA1 and BRCA2 founder mutation analysis in formalin-fixed and paraffin-embedded (FFPE) tissue.

Authors:  M A Adank; E Brogi; F Bogomolniy; E A Wadsworth; K J Lafaro; C J Yee; T Kirchhoff; E J Meijers-Heijboer; N D Kauff; J Boyd; K Offit
Journal:  Fam Cancer       Date:  2006-05-25       Impact factor: 2.375

3.  Molecular diagnostic profiling of lung cancer specimens with a semiconductor-based massive parallel sequencing approach: feasibility, costs, and performance compared with conventional sequencing.

Authors:  Volker Endris; Roland Penzel; Arne Warth; Alexander Muckenhuber; Peter Schirmacher; Albrecht Stenzinger; Wilko Weichert
Journal:  J Mol Diagn       Date:  2013-08-21       Impact factor: 5.568

4.  Initial Results of Multigene Panel Testing for Hereditary Breast and Ovarian Cancer and Lynch Syndrome.

Authors:  Dt R Howarth; Sharon S Lum; Pamela Esquivel; Carlos A Garberoglio; Maheswari Senthil; Naveenraj L Solomon
Journal:  Am Surg       Date:  2015-10       Impact factor: 0.688

5.  BRCA mutation frequency and patterns of treatment response in BRCA mutation-positive women with ovarian cancer: a report from the Australian Ovarian Cancer Study Group.

Authors:  Kathryn Alsop; Sian Fereday; Cliff Meldrum; Anna deFazio; Catherine Emmanuel; Joshy George; Alexander Dobrovic; Michael J Birrer; Penelope M Webb; Colin Stewart; Michael Friedlander; Stephen Fox; David Bowtell; Gillian Mitchell
Journal:  J Clin Oncol       Date:  2012-06-18       Impact factor: 44.544

6.  Cancer incidence and mortality patterns in Europe: estimates for 40 countries in 2012.

Authors:  J Ferlay; E Steliarova-Foucher; J Lortet-Tieulent; S Rosso; J W W Coebergh; H Comber; D Forman; F Bray
Journal:  Eur J Cancer       Date:  2013-02-26       Impact factor: 9.162

7.  Grading ovarian tumors. Evaluation of decision making by different pathologists.

Authors:  J P Baak; J F Delemarre; F A Langley; A Talerman
Journal:  Anal Quant Cytol Histol       Date:  1986-12       Impact factor: 0.302

8.  A reliable method for the detection of BRCA1 and BRCA2 mutations in fixed tumour tissue utilising multiplex PCR-based targeted next generation sequencing.

Authors:  Gillian Ellison; Shuwen Huang; Hedley Carr; Andrew Wallace; Miika Ahdesmaki; Sanjeev Bhaskar; John Mills
Journal:  BMC Clin Pathol       Date:  2015-03-24

Review 9.  Next-Generation Sequencing in Clinical Molecular Diagnostics of Cancer: Advantages and Challenges.

Authors:  Rajyalakshmi Luthra; Hui Chen; Sinchita Roy-Chowdhuri; R Rajesh Singh
Journal:  Cancers (Basel)       Date:  2015-10-14       Impact factor: 6.639

Review 10.  Clinical applications of next generation sequencing in cancer: from panels, to exomes, to genomes.

Authors:  Tony Shen; Stefan Hans Pajaro-Van de Stadt; Nai Chien Yeat; Jimmy C-H Lin
Journal:  Front Genet       Date:  2015-06-17       Impact factor: 4.599

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1.  Quality assurance trials for Ki67 assessment in pathology.

Authors:  M Raap; S Ließem; J Rüschoff; A Fisseler-Eckhoff; A Reiner; S Dirnhofer; R von Wasielewski; H Kreipe
Journal:  Virchows Arch       Date:  2017-05-11       Impact factor: 4.064

2.  [BRCA diagnostics of ovarian cancer : Molecular tumor testing since the introduction of PARP inhibitor therapy].

Authors:  H Löser; C Heydt; R Büttner; B Markiefka
Journal:  Pathologe       Date:  2017-03       Impact factor: 1.011

3.  Simultaneous detection of BRCA mutations and large genomic rearrangements in germline DNA and FFPE tumor samples.

Authors:  Gábor Jaksa; Lajos Pintér; Farkas Sükösd; Zoltán Gyuris; Adrienn Hajdu; Erika Határvölgyi; Katalin Priskin; Lajos Haracska
Journal:  Oncotarget       Date:  2016-09-20

Review 4.  Integration of Genomic Profiling and Organoid Development in Precision Oncology.

Authors:  Hyunho Yoon; Sanghoon Lee
Journal:  Int J Mol Sci       Date:  2021-12-25       Impact factor: 5.923

5.  Multicenter validation of cancer gene panel-based next-generation sequencing for translational research and molecular diagnostics.

Authors:  B Hirsch; V Endris; S Lassmann; W Weichert; N Pfarr; P Schirmacher; V Kovaleva; M Werner; I Bonzheim; F Fend; J Sperveslage; K Kaulich; A Zacher; G Reifenberger; K Köhrer; S Stepanow; S Lerke; T Mayr; D E Aust; G Baretton; S Weidner; A Jung; T Kirchner; M L Hansmann; L Burbat; E von der Wall; M Dietel; M Hummel
Journal:  Virchows Arch       Date:  2018-01-27       Impact factor: 4.064

6.  An evaluation of the challenges to developing tumor BRCA1 and BRCA2 testing methodologies for clinical practice.

Authors:  Gillian Ellison; Miika Ahdesmäki; Sally Luke; Paul M Waring; Andrew Wallace; Ronnie Wright; Benno Röthlisberger; Katja Ludin; Sabine Merkelbach-Bruse; Carina Heydt; Marjolijn J L Ligtenberg; Arjen R Mensenkamp; David Gonzalez de Castro; Thomas Jones; Ana Vivancos; Olga Kondrashova; Patrick Pauwels; Christine Weyn; Eric Hahnen; Jan Hauke; Richie Soong; Zhongwu Lai; Brian Dougherty; T Hedley Carr; Justin Johnson; John Mills; J Carl Barrett
Journal:  Hum Mutat       Date:  2017-12-28       Impact factor: 4.878

7.  An optimized BRCA1/2 next-generation sequencing for different clinical sample types.

Authors:  Yoonjung Kim; Chi Heum Cho; Jung Sook Ha; Do Hoon Kim; Sun Young Kwon; Seoung Chul Oh; Kyung A Lee
Journal:  J Gynecol Oncol       Date:  2019-08-06       Impact factor: 4.401

  7 in total

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