| Literature DB >> 27002851 |
Amélie E Bigorgne1, Beena John1, Mohammad R Ebrahimkhani1, Masami Shimizu-Albergine2, Jean S Campbell2, Ian N Crispe1,2.
Abstract
BACKGROUND & AIMS: The gut microbiota significantly influences hepatic immunity. Little is known on the precise mechanism by which liver cells mediate recognition of gut microbes at steady state. Here we tested the hypothesis that a specific liver cell population was the sensor and we aimed at deciphering the mechanism by which the activation of TLR4 pathway would mediate liver response to gut microbiota.Entities:
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Year: 2016 PMID: 27002851 PMCID: PMC4803332 DOI: 10.1371/journal.pone.0151063
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Genes down-regulated 2-fold or more in the total liver of TLR4 deficient mice compared to WT mice.
| Gene ID | Name | Fold increase ( | Functions |
|---|---|---|---|
| Neuronal Pas Domain protein-2 | 19.4 (0.006) | Circadian sleep wake cycle/ locomotive rythm, regulation of transcription | |
| Serine (or cysteine) proteinase inhibitor, clade B, member 1a | 5.2 (0.032) | Protein catabolism, peptidase and endo-peptidase inhibitor | |
| Histocompatibility 2, class II antigen E beta | 4.3 (0.031) | Antigen presentation | |
| Baculoviral IAP repeat-containing 6 | 3.9 (0.048) | Protein ubiquitination, anti-apoptotic | |
| BTB (POZ) domain containing 5 | 3.6 (0.029) | Protein binding | |
| Myeloid ecotropic viral integration site-related gene 1 | 3.8 (0.047) | Eye morphogenesis, regulation of transcription, DNA dependent | |
| Dynamin 1-like | 3.4 (0.001) | GTP binding, | |
| Hemoglobin alpha adult chain-1 | 3.3 (0.036) | Oxygen transport | |
| Rho family GTPase 1 | 3.2 (0.002) | Actin filament organization, negative regulation of cell adhesion | |
| Zinc finger protein 101 | 3.0 (0.035) | Protein coding | |
| Cytochrome P450, family 2, subfamily b, polypeptide 20 | 2.8 (0.027) | Electron transport | |
| Nischarin | 2.7 (0.001) | RAC protein, actin cytoskeleton, negative regulation of cell migration | |
| Hemoglobin Y beta like embryonic chain | 2.6 (0.028) | Oxygen transport | |
| Solute carrier family 25, member 30 | 2.5 (0.011) | Transport | |
| CD36 antigen | 2.5 (0.017) | Cell adhesion, receptor activity, protein binding | |
| Cyclin G2 | 2.4 (0.014) | Regulation of cell cycle, | |
| Ring finger protein 125 | 2.3 (0.020) | ||
| Phosphodiesterase 4b camp specific | 2.2 (0.04) | cAMP specific phosphodiesterase | |
| Histocompatibility 2, class II antigen A, alpha | 2.2 (0.044) | Antigen presentation |
Genes up-regulated 2 fold or more in the total liver of TLR4 deficient mice compared to WT mice.
| Gene ID | Name | Fold increase ( | Functions |
|---|---|---|---|
| Ubiquitin specific protease 2 | 11.9 (0.012) | Ubiquitin thiolesterase | |
| Lipase, endothelial | 5.0 (0.016) | Lipid catabolism | |
| CCR4 carbon catabolite repression 4-like (Nocturin) | 5.0 (0.002) | Circadian deadenylase, hepatic steatosis | |
| SRC-like adaptor | 4.6 (0.025) | TCR and BCR intracellular signaling cascade | |
| Period homolog 2 | 3.3 (0.028) | Circadian rhythm | |
| Wee 1 homolog | 3.1 (0.041) | Cell cycle, serine threonine kinase, Circadian rythm. | |
| Farnesyl diphosphate synthetase | 2.9 (0.006) | Lipid/Steroid biosynthetic process | |
| Cytochrome P450, family 27, a1 | 2.8 (0.004) | Hepatic bile acid, fatty acid and cholesterol metabolism | |
| RNA imprinted and accumulated in nucleus | 2.8 (0.003) | ||
| Keratin complex 1, acidic, gene 13 | 2.9 (0.015) | Cytoskeletal organization and biosynthesis | |
| Semaphorin domain, secreted 3E | 2.9 (0.022) | Interacts with receptor PlexinD1, endothelial cell positioning and patterning of the developing vasculature | |
| Chemokine-like factor 2A | 2.2 (0.005) | Chemotaxis, cytokine activity |
Fig 1Decrease of CXCL1 message and neutrophil counts in TLR4 deficient liver and after antibiotic treatment.
(A) CXCL1 expression in the total liver as analyzed by microarrays. Mean values were obtained from three Genechips for three WT and three TLR4 deficient mice. Statistically significant differences between WT and TLR4 deficient mice are indicated by an asterisk, *P<.05, Student t test. (B) CXCL1 expression measured by quantitative RT-PCR. The relative quantity of CXCL1 mRNA in the total liver of WT and TLR4 deficient mice is indicated (*P<.01). (C) Relative expression of CXCL1 in the liver from untreated or antibiotic-treated (ABT) WT mice and TLR4 deficient mice; *P<.01 (D) Neutrophils counts in the total liver. CD11+ Gr1high TCR- cells among total live leukocytes isolated from WT and TLR4 deficient liver. In Fig 1B, 1C and 1D, data are representative of five separate experiments with six WT mice (treated or not with antibiotics) and five TLR4 mice; P<.05; unpaired Mann -Whitney test.
Fig 2Hepatic stellate cells are the major source of CXCL1, as shown by both quantification of secretion and in situ localization.
(A) Quantification of CXCL1 secretion in enriched fractions of hepatocytes, KCs, LSECs and HSCs, freshly isolated and stimulated in vitro with LPS (1 ng/mL LPS, black squares) during 24 hours. Data are representative of three separate experiments with six mice in each group; P<.05. (B) In-situ localization of CXCL1 in the liver. Immunofluorescent detection for CXCL1 (red) and liver cells nuclei (blue) for nuclei first shows CXCL1 expression in the sinusoids throughout liver parenchyma. (C) Higher resolution shows that CXCL1 (red) is expressed by sub-endothelial cells, which also store retinol droplets in separate compartments, as shown by CRBP1 staining (green). The Cellular Retinol Binding Protein-1 (CRBP-1) is the best marker to detect simultaneously both resting (Glial Fibrillary Acidic Protein, GFAP+) and activated (α-Smooth Muscle Actin, αSMA+) stellate cells in situ. Alexa Fluor-546-CXCL1 (red) staining does not colocalize either with Tie2-GFP in LSECs (green, upper panel), or F4/80 in KCs (blue, middle panel), but with AlexaFluor-488-CRBP1 (green, lower panel), staining both resting and activated HSCs. TOPRO3 was used for nuclei vizualisation.
Fig 3Cytokine secretion by hepatocytes, KCs, LSECs and HSCs after isolation from the same liver and in response to low levels of LPS.
Liver cells were freshly isolated on density gradient followed by cell sorting and stimulated with LPS (1ng/mL LPS, black bars or 100ng/mL LPS, hatched bars). Cytokine secretion was measured in the same supernatant with a multiplex assay, run in triplicates. Graphs show three experiments with six mice in each group and statistically significant differences (*P<.05) between basal LPS stimulation (1ng/mL) and higher LPS stimulation (100ng/mL) are indicated. Lower panel: bright field images of cells right after isolation (Hepatocytes, LSECs, KCs). Images of HSCs at higher resolution show the retinol droplets at Day 0 and the typical shape of the activated stellate cells after 4 days in culture.
Fig 4Neutrophils migrate in response to CXCL1 secretion following TLR4 activation in hepatic stellate cells.
(A) Schematic representation of the neutrophil chemotaxis assay. (B) Quantification of neutrophil migration in response to secretory WT or TLR4 deficient stellate cells. WT stellate cells were treated (WT HSC + anti CXCL1) or not with anti-CXCL1 antibody. As for internal positive control, the migration of neutrophils towards TLR4 deficient stellate cells supplemented with CXCL1 protein (TLR4 HSC + CXCL1) and with CXCL1 protein only (CXCL1) was quantified in only one experiment. Graphs show three experiments with six mice in each group and statistically significant differences (*P<.05) between WT HSCs and TLR4 deficient HSCs, as well as between WT HSCs treated or not with anti-CXCL1, are indicated.