Literature DB >> 27001119

Response to interferon-beta treatment in multiple sclerosis patients: a genome-wide association study.

S Mahurkar1, M Moldovan2,3, V Suppiah1, M Sorosina4, F Clarelli4, G Liberatore4,5, S Malhotra6, X Montalban6, A Antigüedad7, M Krupa8, V G Jokubaitis9, F C McKay10, P N Gatt10, M J Fabis-Pedrini11, V Martinelli4, G Comi4,5, J Lechner-Scott12, A G Kermode11,13, M Slee8, B V Taylor14, K Vandenbroeck15,16,17, M Comabella6, F M Boneschi4,5, C King1.   

Abstract

Up to 50% of multiple sclerosis (MS) patients do not respond to interferon-beta (IFN-β) treatment and determination of response requires lengthy clinical follow-up of up to 2 years. Response predictive genetic markers would significantly improve disease management. We aimed to identify IFN-β treatment response genetic marker(s) by performing a two-stage genome-wide association study (GWAS). The GWAS was carried out using data from 151 Australian MS patients from the ANZgene/WTCCC2 MS susceptibility GWAS (responder (R)=51, intermediate responders=24 and non-responders (NR)=76). Of the single-nucleotide polymorphisms (SNP) that were validated in an independent group of 479 IFN-β-treated MS patients from Australia, Spain and Italy (R=273 and NR=206), eight showed evidence of association with treatment response. Among the replicated associations, the strongest was observed for FHIT (Fragile Histidine Triad; combined P-value 6.74 × 10-6) and followed by variants in GAPVD1 (GTPase activating protein and VPS9 domains 1; combined P-value 5.83 × 10-5) and near ZNF697 (combined P-value 8.15 × 10-5).

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Year:  2016        PMID: 27001119     DOI: 10.1038/tpj.2016.20

Source DB:  PubMed          Journal:  Pharmacogenomics J        ISSN: 1470-269X            Impact factor:   3.550


  32 in total

1.  Defining the response to interferon-beta in relapsing-remitting multiple sclerosis patients.

Authors:  Jordi Río; Carlos Nos; Mar Tintoré; Nieves Téllez; Ingrid Galán; Raúl Pelayo; Manuel Comabella; Xavier Montalban
Journal:  Ann Neurol       Date:  2006-02       Impact factor: 10.422

2.  Genome-wide association study identifies new multiple sclerosis susceptibility loci on chromosomes 12 and 20.

Authors: 
Journal:  Nat Genet       Date:  2009-06-14       Impact factor: 38.330

3.  Analysis of genes, pathways and networks involved in disease severity and age at onset in primary-progressive multiple sclerosis.

Authors:  G Giacalone; F Clarelli; A M Osiceanu; C Guaschino; P Brambilla; M Sorosina; G Liberatore; A Zauli; F Esposito; M Rodegher; A Ghezzi; D Galimberti; F Patti; N Barizzone; F Guerini; V Martinelli; M Leone; G Comi; S D'Alfonso; F Martinelli Boneschi
Journal:  Mult Scler       Date:  2015-01-12       Impact factor: 6.312

4.  MSBase: an international, online registry and platform for collaborative outcomes research in multiple sclerosis.

Authors:  H Butzkueven; J Chapman; E Cristiano; F Grand'Maison; M Hoffmann; G Izquierdo; D Jolley; L Kappos; T Leist; D Pöhlau; V Rivera; M Trojano; F Verheul; J P Malkowski
Journal:  Mult Scler       Date:  2006-12       Impact factor: 6.312

Review 5.  Ubiquitination in postsynaptic function and plasticity.

Authors:  Angela M Mabb; Michael D Ehlers
Journal:  Annu Rev Cell Dev Biol       Date:  2010       Impact factor: 13.827

Review 6.  Defining and scoring response to IFN-β in multiple sclerosis.

Authors:  Maria Pia Sormani; Nicola De Stefano
Journal:  Nat Rev Neurol       Date:  2013-07-30       Impact factor: 42.937

7.  Methylation patterns of cell-free plasma DNA in relapsing-remitting multiple sclerosis.

Authors:  Thomas Liggett; Anatoliy Melnikov; Shilpa Tilwalli; Qilong Yi; Haiyan Chen; Charles Replogle; Xuan Feng; Anthony Reder; Dusan Stefoski; Roumen Balabanov; Victor Levenson
Journal:  J Neurol Sci       Date:  2010-01-12       Impact factor: 3.181

8.  Genome-wide pharmacogenomic analysis of the response to interferon beta therapy in multiple sclerosis.

Authors:  Esther Byun; Stacy J Caillier; Xavier Montalban; Pablo Villoslada; Oscar Fernández; David Brassat; Manuel Comabella; Joanne Wang; Lisa F Barcellos; Sergio E Baranzini; Jorge R Oksenberg
Journal:  Arch Neurol       Date:  2008-01-14

9.  Glypican 5 is an interferon-beta response gene: a replication study.

Authors:  M D C Cénit; F Blanco-Kelly; V de las Heras; M Bartolomé; E G de la Concha; E Urcelay; R Arroyo; A Martínez
Journal:  Mult Scler       Date:  2009-06-25       Impact factor: 6.312

10.  Genetic risk and a primary role for cell-mediated immune mechanisms in multiple sclerosis.

Authors:  Stephen Sawcer; Garrett Hellenthal; Matti Pirinen; Chris C A Spencer; Nikolaos A Patsopoulos; Loukas Moutsianas; Alexander Dilthey; Zhan Su; Colin Freeman; Sarah E Hunt; Sarah Edkins; Emma Gray; David R Booth; Simon C Potter; An Goris; Gavin Band; Annette Bang Oturai; Amy Strange; Janna Saarela; Céline Bellenguez; Bertrand Fontaine; Matthew Gillman; Bernhard Hemmer; Rhian Gwilliam; Frauke Zipp; Alagurevathi Jayakumar; Roland Martin; Stephen Leslie; Stanley Hawkins; Eleni Giannoulatou; Sandra D'alfonso; Hannah Blackburn; Filippo Martinelli Boneschi; Jennifer Liddle; Hanne F Harbo; Marc L Perez; Anne Spurkland; Matthew J Waller; Marcin P Mycko; Michelle Ricketts; Manuel Comabella; Naomi Hammond; Ingrid Kockum; Owen T McCann; Maria Ban; Pamela Whittaker; Anu Kemppinen; Paul Weston; Clive Hawkins; Sara Widaa; John Zajicek; Serge Dronov; Neil Robertson; Suzannah J Bumpstead; Lisa F Barcellos; Rathi Ravindrarajah; Roby Abraham; Lars Alfredsson; Kristin Ardlie; Cristin Aubin; Amie Baker; Katharine Baker; Sergio E Baranzini; Laura Bergamaschi; Roberto Bergamaschi; Allan Bernstein; Achim Berthele; Mike Boggild; Jonathan P Bradfield; David Brassat; Simon A Broadley; Dorothea Buck; Helmut Butzkueven; Ruggero Capra; William M Carroll; Paola Cavalla; Elisabeth G Celius; Sabine Cepok; Rosetta Chiavacci; Françoise Clerget-Darpoux; Katleen Clysters; Giancarlo Comi; Mark Cossburn; Isabelle Cournu-Rebeix; Mathew B Cox; Wendy Cozen; Bruce A C Cree; Anne H Cross; Daniele Cusi; Mark J Daly; Emma Davis; Paul I W de Bakker; Marc Debouverie; Marie Beatrice D'hooghe; Katherine Dixon; Rita Dobosi; Bénédicte Dubois; David Ellinghaus; Irina Elovaara; Federica Esposito; Claire Fontenille; Simon Foote; Andre Franke; Daniela Galimberti; Angelo Ghezzi; Joseph Glessner; Refujia Gomez; Olivier Gout; Colin Graham; Struan F A Grant; Franca Rosa Guerini; Hakon Hakonarson; Per Hall; Anders Hamsten; Hans-Peter Hartung; Rob N Heard; Simon Heath; Jeremy Hobart; Muna Hoshi; Carmen Infante-Duarte; Gillian Ingram; Wendy Ingram; Talat Islam; Maja Jagodic; Michael Kabesch; Allan G Kermode; Trevor J Kilpatrick; Cecilia Kim; Norman Klopp; Keijo Koivisto; Malin Larsson; Mark Lathrop; Jeannette S Lechner-Scott; Maurizio A Leone; Virpi Leppä; Ulrika Liljedahl; Izaura Lima Bomfim; Robin R Lincoln; Jenny Link; Jianjun Liu; Aslaug R Lorentzen; Sara Lupoli; Fabio Macciardi; Thomas Mack; Mark Marriott; Vittorio Martinelli; Deborah Mason; Jacob L McCauley; Frank Mentch; Inger-Lise Mero; Tania Mihalova; Xavier Montalban; John Mottershead; Kjell-Morten Myhr; Paola Naldi; William Ollier; Alison Page; Aarno Palotie; Jean Pelletier; Laura Piccio; Trevor Pickersgill; Fredrik Piehl; Susan Pobywajlo; Hong L Quach; Patricia P Ramsay; Mauri Reunanen; Richard Reynolds; John D Rioux; Mariaemma Rodegher; Sabine Roesner; Justin P Rubio; Ina-Maria Rückert; Marco Salvetti; Erika Salvi; Adam Santaniello; Catherine A Schaefer; Stefan Schreiber; Christian Schulze; Rodney J Scott; Finn Sellebjerg; Krzysztof W Selmaj; David Sexton; Ling Shen; Brigid Simms-Acuna; Sheila Skidmore; Patrick M A Sleiman; Cathrine Smestad; Per Soelberg Sørensen; Helle Bach Søndergaard; Jim Stankovich; Richard C Strange; Anna-Maija Sulonen; Emilie Sundqvist; Ann-Christine Syvänen; Francesca Taddeo; Bruce Taylor; Jenefer M Blackwell; Pentti Tienari; Elvira Bramon; Ayman Tourbah; Matthew A Brown; Ewa Tronczynska; Juan P Casas; Niall Tubridy; Aiden Corvin; Jane Vickery; Janusz Jankowski; Pablo Villoslada; Hugh S Markus; Kai Wang; Christopher G Mathew; James Wason; Colin N A Palmer; H-Erich Wichmann; Robert Plomin; Ernest Willoughby; Anna Rautanen; Juliane Winkelmann; Michael Wittig; Richard C Trembath; Jacqueline Yaouanq; Ananth C Viswanathan; Haitao Zhang; Nicholas W Wood; Rebecca Zuvich; Panos Deloukas; Cordelia Langford; Audrey Duncanson; Jorge R Oksenberg; Margaret A Pericak-Vance; Jonathan L Haines; Tomas Olsson; Jan Hillert; Adrian J Ivinson; Philip L De Jager; Leena Peltonen; Graeme J Stewart; David A Hafler; Stephen L Hauser; Gil McVean; Peter Donnelly; Alastair Compston
Journal:  Nature       Date:  2011-08-10       Impact factor: 49.962

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  6 in total

Review 1.  Neuroinflammation - using big data to inform clinical practice.

Authors:  Calliope A Dendrou; Gil McVean; Lars Fugger
Journal:  Nat Rev Neurol       Date:  2016-11-18       Impact factor: 42.937

2.  Pharmacogenetic Predictors of Response to Interferon Beta Therapy in Multiple Sclerosis.

Authors:  María Isabel Carrasco-Campos; Cristina Pérez-Ramírez; Elena Macías-Cortés; Elena Puerta-García; Antonio Sánchez-Pozo; Carmen Arnal-García; Francisco Javier Barrero-Hernández; Miguel Ángel Calleja-Hernández; Alberto Jiménez-Morales; Marisa Cañadas-Garre
Journal:  Mol Neurobiol       Date:  2021-06-24       Impact factor: 5.590

Review 3.  Pharmacogenetic Biomarkers to Predict Treatment Response in Multiple Sclerosis: Current and Future Perspectives.

Authors:  Patricia K Coyle
Journal:  Mult Scler Int       Date:  2017-07-19

Review 4.  Pharmacogenomics of Multiple Sclerosis: A Systematic Review.

Authors:  Keli Hočevar; Smiljana Ristić; Borut Peterlin
Journal:  Front Neurol       Date:  2019-02-26       Impact factor: 4.003

5.  A pharmacogenetic signature of high response to Copaxone in late-phase clinical-trial cohorts of multiple sclerosis.

Authors:  Colin J Ross; Fadi Towfic; Jyoti Shankar; Daphna Laifenfeld; Mathis Thoma; Matthew Davis; Brian Weiner; Rebecca Kusko; Ben Zeskind; Volker Knappertz; Iris Grossman; Michael R Hayden
Journal:  Genome Med       Date:  2017-05-31       Impact factor: 11.117

6.  Meta-Analysis of Polymyositis and Dermatomyositis Microarray Data Reveals Novel Genetic Biomarkers.

Authors:  Jaeseung Song; Daeun Kim; Juyeon Hong; Go Woon Kim; Junghyun Jung; Sejin Park; Hee Jung Park; Jong Wha J Joo; Wonhee Jang
Journal:  Genes (Basel)       Date:  2019-10-30       Impact factor: 4.096

  6 in total

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