Literature DB >> 26997586

The N-terminus of VDAC: Structure, mutational analysis, and a potential role in regulating barrel shape.

Sabbir R Shuvo1, Fraser G Ferens1, Deborah A Court2.   

Abstract

A novel feature of the voltage-dependent anion channel (VDAC, mitochondrial porin), is the barrel, comprising an odd number of β-strands and closed by parallel strands. Recent research has focused on the N-terminal segment, which in the available structures, resides in the lumen and is not part of the barrel. In this review, the structural data obtained from vertebrate VDAC are integrated with those from VDAC in artificial bilayers, emphasizing the array of native and tagged versions of VDAC used. The data are discussed with respect to a recent gating model (Zachariae et al. (2012) Structure 20:1-10), in which the N-terminus acts not as a gate on a stable barrel, but rather stabilizes the barrel, preventing its shift into a partially collapsed, low-conductance, closed state. Additionally, the role of the N-terminus in VDAC oligomerization, apoptosis through interactions with hexokinase and its interaction with ATP are discussed briefly.
Copyright © 2016 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Mitochondrial porin; N-terminus; VDAC; Voltage gating; Voltage-dependent anion selective channel; β-Barrel

Mesh:

Substances:

Year:  2016        PMID: 26997586     DOI: 10.1016/j.bbamem.2016.03.017

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN: 0006-3002


  16 in total

1.  Mitochondrial sorting and assembly machinery operates by β-barrel switching.

Authors:  Hironori Takeda; Akihisa Tsutsumi; Tomohiro Nishizawa; Caroline Lindau; Jon V Busto; Lena-Sophie Wenz; Lars Ellenrieder; Kenichiro Imai; Sebastian P Straub; Waltraut Mossmann; Jian Qiu; Yu Yamamori; Kentaro Tomii; Junko Suzuki; Takeshi Murata; Satoshi Ogasawara; Osamu Nureki; Thomas Becker; Nikolaus Pfanner; Nils Wiedemann; Masahide Kikkawa; Toshiya Endo
Journal:  Nature       Date:  2021-01-06       Impact factor: 49.962

2.  Interactions of a Polypeptide with a Protein Nanopore Under Crowding Conditions.

Authors:  Motahareh Ghahari Larimi; Lauren Ashley Mayse; Liviu Movileanu
Journal:  ACS Nano       Date:  2019-04-03       Impact factor: 15.881

3.  Aberrantly Large Single-Channel Conductance of Polyhistidine Arm-Containing Protein Nanopores.

Authors:  Avinash Kumar Thakur; Motahareh Ghahari Larimi; Kristin Gooden; Liviu Movileanu
Journal:  Biochemistry       Date:  2017-08-28       Impact factor: 3.162

4.  Increased reactive oxygen species production and maintenance of membrane potential in VDAC-less Neurospora crassa mitochondria.

Authors:  Sabbir R Shuvo; Lilian M Wiens; Saravananaidu Subramaniam; Jason R Treberg; Deborah A Court
Journal:  J Bioenerg Biomembr       Date:  2019-08-07       Impact factor: 2.945

Review 5.  Voltage-Dependent Anion Channel 1 As an Emerging Drug Target for Novel Anti-Cancer Therapeutics.

Authors:  Varda Shoshan-Barmatz; Yakov Krelin; Anna Shteinfer-Kuzmine; Tasleem Arif
Journal:  Front Oncol       Date:  2017-07-31       Impact factor: 6.244

Review 6.  Ten Years of High Resolution Structural Research on the Voltage Dependent Anion Channel (VDAC)-Recent Developments and Future Directions.

Authors:  Kornelius Zeth; Ulrich Zachariae
Journal:  Front Physiol       Date:  2018-03-07       Impact factor: 4.566

Review 7.  Bcl-2-Protein Family as Modulators of IP3 Receptors and Other Organellar Ca2+ Channels.

Authors:  Hristina Ivanova; Tim Vervliet; Giovanni Monaco; Lara E Terry; Nicolas Rosa; Mariah R Baker; Jan B Parys; Irina I Serysheva; David I Yule; Geert Bultynck
Journal:  Cold Spring Harb Perspect Biol       Date:  2020-04-01       Impact factor: 10.005

Review 8.  Voltage-Dependent Anion Selective Channel Isoforms in Yeast: Expression, Structure, and Functions.

Authors:  Maria Carmela Di Rosa; Francesca Guarino; Stefano Conti Nibali; Andrea Magrì; Vito De Pinto
Journal:  Front Physiol       Date:  2021-05-19       Impact factor: 4.566

9.  Voltage Dependence of Conformational Dynamics and Subconducting States of VDAC-1.

Authors:  Rodolfo Briones; Conrad Weichbrodt; Licia Paltrinieri; Ingo Mey; Saskia Villinger; Karin Giller; Adam Lange; Markus Zweckstetter; Christian Griesinger; Stefan Becker; Claudia Steinem; Bert L de Groot
Journal:  Biophys J       Date:  2016-09-20       Impact factor: 4.033

10.  Phosphorylation of purified mitochondrial Voltage-Dependent Anion Channel by c-Jun N-terminal Kinase-3 modifies channel voltage-dependence.

Authors:  Rajeev Gupta; Subhendu Ghosh
Journal:  Biochim Open       Date:  2017-03-10
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