Literature DB >> 26996409

To be or not to be alive: How recent discoveries challenge the traditional definitions of viruses and life.

Patrick Forterre1.   

Abstract

Three major discoveries have recently profoundly modified our perception of the viral world: molecular ecologists have shown that viral particles are more abundant than cells in natural environments; structural biologists have shown that some viruses from the three domains of life, Bacteria, Eukarya and Archaea, are evolutionarily related, and microbiologists have discovered giant viruses that rival with cells in terms of size and gene content. I discuss here the scientific and philosophical impact of these discoveries on the debates over the definition, nature (living or not), and origin of viruses. I suggest that viruses have often been considered non-living, because they are traditionally assimilated to their virions. However, the term virus describes a biological process and should integrate all aspects of the viral reproduction cycle. It is especially important to focus on the intracellular part of this cycle, the virocell, when viral information is actively expressed and reproduced, allowing the emergence of new viral genes. The virocell concept theoretically removes roadblocks that prevent defining viruses as living organisms. However, defining a "living organism" remains challenging, as indicated by the case of organelles that evolved from intracellular bacteria. To bypass this problem, I suggest considering that all biological entities that actively participate in the process of life are living.
Copyright © 2016. Published by Elsevier Ltd.

Keywords:  Bacteriophage; Life definition; Organism; Virocell; Virus

Mesh:

Year:  2016        PMID: 26996409     DOI: 10.1016/j.shpsc.2016.02.013

Source DB:  PubMed          Journal:  Stud Hist Philos Biol Biomed Sci        ISSN: 1369-8486


  18 in total

1.  Bacterial Origin and Reductive Evolution of the CPR Group.

Authors:  Rijja Hussain Bokhari; Nooreen Amirjan; Hyeonsoo Jeong; Kyung Mo Kim; Gustavo Caetano-Anollés; Arshan Nasir
Journal:  Genome Biol Evol       Date:  2020-03-01       Impact factor: 3.416

2.  Diversification of giant and large eukaryotic dsDNA viruses predated the origin of modern eukaryotes.

Authors:  Julien Guglielmini; Anthony C Woo; Mart Krupovic; Patrick Forterre; Morgan Gaia
Journal:  Proc Natl Acad Sci U S A       Date:  2019-09-10       Impact factor: 11.205

Review 3.  Evolving Perspective on the Origin and Diversification of Cellular Life and the Virosphere.

Authors:  Anja Spang; Tara A Mahendrarajah; Pierre Offre; Courtney W Stairs
Journal:  Genome Biol Evol       Date:  2022-05-31       Impact factor: 4.065

4.  Phylogenetic Tracings of Proteome Size Support the Gradual Accretion of Protein Structural Domains and the Early Origin of Viruses from Primordial Cells.

Authors:  Arshan Nasir; Kyung Mo Kim; Gustavo Caetano-Anollés
Journal:  Front Microbiol       Date:  2017-06-23       Impact factor: 5.640

5.  Two genetic codes: Repetitive syntax for active non-coding RNAs; non-repetitive syntax for the DNA archives.

Authors:  Guenther Witzany
Journal:  Commun Integr Biol       Date:  2017-03-15

Review 6.  A Review of Phage Therapy against Bacterial Pathogens of Aquatic and Terrestrial Organisms.

Authors:  Janis Doss; Kayla Culbertson; Delilah Hahn; Joanna Camacho; Nazir Barekzi
Journal:  Viruses       Date:  2017-03-18       Impact factor: 5.048

7.  Identification of Capsid/Coat Related Protein Folds and Their Utility for Virus Classification.

Authors:  Arshan Nasir; Gustavo Caetano-Anollés
Journal:  Front Microbiol       Date:  2017-03-10       Impact factor: 5.640

Review 8.  The Crossroads between Host Copper Metabolism and Influenza Infection.

Authors:  Ludmila V Puchkova; Irina V Kiseleva; Elena V Polishchuk; Massimo Broggini; Ekaterina Yu Ilyechova
Journal:  Int J Mol Sci       Date:  2021-05-23       Impact factor: 5.923

9.  Cedratvirus, a Double-Cork Structured Giant Virus, is a Distant Relative of Pithoviruses.

Authors:  Julien Andreani; Sarah Aherfi; Jacques Yaacoub Bou Khalil; Fabrizio Di Pinto; Idir Bitam; Didier Raoult; Philippe Colson; Bernard La Scola
Journal:  Viruses       Date:  2016-11-03       Impact factor: 5.048

10.  A Preliminary List of Horizontally Transferred Genes in Prokaryotes Determined by Tree Reconstruction and Reconciliation.

Authors:  Hyeonsoo Jeong; Arshan Nasir
Journal:  Front Genet       Date:  2017-08-28       Impact factor: 4.599

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.