Literature DB >> 26995601

Random walks with shape prior for cochlea segmentation in ex vivo μCT.

Esmeralda Ruiz Pujadas1, Hans Martin Kjer2, Gemma Piella3, Mario Ceresa3, Miguel Angel González Ballester3,4.   

Abstract

PURPOSE: Cochlear implantation is a safe and effective surgical procedure to restore hearing in deaf patients. However, the level of restoration achieved may vary due to differences in anatomy, implant type and surgical access. In order to reduce the variability of the surgical outcomes, we previously proposed the use of a high-resolution model built from [Formula: see text] images and then adapted to patient-specific clinical CT scans. As the accuracy of the model is dependent on the precision of the original segmentation, it is extremely important to have accurate [Formula: see text] segmentation algorithms.
METHODS: We propose a new framework for cochlea segmentation in ex vivo [Formula: see text] images using random walks where a distance-based shape prior is combined with a region term estimated by a Gaussian mixture model. The prior is also weighted by a confidence map to adjust its influence according to the strength of the image contour. Random walks is performed iteratively, and the prior mask is aligned in every iteration.
RESULTS: We tested the proposed approach in ten [Formula: see text] data sets and compared it with other random walks-based segmentation techniques such as guided random walks (Eslami et al. in Med Image Anal 17(2):236-253, 2013) and constrained random walks (Li et al. in Advances in image and video technology. Springer, Berlin, pp 215-226, 2012). Our approach demonstrated higher accuracy results due to the probability density model constituted by the region term and shape prior information weighed by a confidence map.
CONCLUSION: The weighted combination of the distance-based shape prior with a region term into random walks provides accurate segmentations of the cochlea. The experiments suggest that the proposed approach is robust for cochlea segmentation.

Entities:  

Keywords:  Distance map; Prior models; Probabilistic map; Random walks; Random walks with prior; Shape prior

Mesh:

Year:  2016        PMID: 26995601     DOI: 10.1007/s11548-016-1365-8

Source DB:  PubMed          Journal:  Int J Comput Assist Radiol Surg        ISSN: 1861-6410            Impact factor:   2.924


  18 in total

1.  Three-dimensional representation of the human cochlea using micro-computed tomography data: presenting an anatomical model for further numerical calculations.

Authors:  Katharina Braun; Frank Böhnke; Thomas Stark
Journal:  Acta Otolaryngol       Date:  2012-03-04       Impact factor: 1.494

2.  Random walks for image segmentation.

Authors:  Leo Grady
Journal:  IEEE Trans Pattern Anal Mach Intell       Date:  2006-11       Impact factor: 6.226

3.  Medical image segmentation by combining graph cuts and oriented active appearance models.

Authors:  Xinjian Chen; Jayaram K Udupa; Ulas Bagci; Ying Zhuge; Jianhua Yao
Journal:  IEEE Trans Image Process       Date:  2012-01-31       Impact factor: 10.856

4.  3D semi-automatic segmentation of the cochlea and inner ear.

Authors:  Diao Xianfen; Chen Siping; Liang Changhong; Wang Yuanmei
Journal:  Conf Proc IEEE Eng Med Biol Soc       Date:  2005

Review 5.  Surgical planning tool for robotically assisted hearing aid implantation.

Authors:  Nicolas Gerber; Brett Bell; Kate Gavaghan; Christian Weisstanner; Marco Caversaccio; Stefan Weber
Journal:  Int J Comput Assist Radiol Surg       Date:  2013-06-14       Impact factor: 2.924

6.  elastix: a toolbox for intensity-based medical image registration.

Authors:  Stefan Klein; Marius Staring; Keelin Murphy; Max A Viergever; Josien P W Pluim
Journal:  IEEE Trans Med Imaging       Date:  2009-11-17       Impact factor: 10.048

7.  Automatic segmentation of intracochlear anatomy in conventional CT.

Authors:  Jack H Noble; Robert F Labadie; Omid Majdani; Benoit M Dawant
Journal:  IEEE Trans Biomed Eng       Date:  2011-06-23       Impact factor: 4.538

8.  Computational Models for Predicting Outcomes of Neuroprosthesis Implantation: the Case of Cochlear Implants.

Authors:  Mario Ceresa; Nerea Mangado; Russell J Andrews; Miguel A Gonzalez Ballester
Journal:  Mol Neurobiol       Date:  2015-06-18       Impact factor: 5.590

9.  Patient-specific simulation of implant placement and function for cochlear implantation surgery planning.

Authors:  Mario Ceresa; Nerea Mangado Lopez; Hector Dejea Velardo; Noemi Carranza Herrezuelo; Pavel Mistrik; Hans Martin Kjer; Sergio Vera; Rasmus R Paulsen; Miguel Angel González Ballester
Journal:  Med Image Comput Comput Assist Interv       Date:  2014

10.  Cochlear implants: a remarkable past and a brilliant future.

Authors:  Blake S Wilson; Michael F Dorman
Journal:  Hear Res       Date:  2008-06-22       Impact factor: 3.208

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