Literature DB >> 26985732

Ancestors of modern plant crops.

Jérôme Salse1.   

Abstract

Recent accumulation of plant genomic resources offers the opportunity to compare modern genomes and model their evolutionary history from their reconstructed Most Recent Common Ancestors (MRCAs) that can be used as a guide to unveil the forces driving the evolutionary success of angiosperms and ultimately to perform applied translational research from models to crops. This article reviews the current state of art of recent structural comparative genomics studies through ancestral genome reconstruction, that is, the field of in silico paleogenomics.
Copyright © 2016 Elsevier Ltd. All rights reserved.

Entities:  

Mesh：

Year:  2016        PMID： 26985732     DOI： 10.1016/j.pbi.2016.02.005

Source DB:  PubMed          Journal:  Curr Opin Plant Biol        ISSN： 1369-5266            Impact factor:   7.834


  16 in total

1.  Extensive sequence divergence between the reference genomes of Taraxacum kok-saghyz and Taraxacum mongolicum.

Authors:  Tao Lin; Xia Xu; Huilong Du; Xiuli Fan; Qingwen Chen; Chunyan Hai; Zijian Zhou; Xiao Su; Liquan Kou; Qiang Gao; Lingwei Deng; Jinsheng Jiang; Hanli You; Yihua Ma; Zhukuan Cheng; Guodong Wang; Chengzhi Liang; Guomin Zhang; Hong Yu; Jiayang Li
Journal:  Sci China Life Sci       Date:  2021-12-17       Impact factor: 6.038

2.  Evolution of the DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN subfamily in green plants.

Authors:  Jiapeng Han; Xiaoxue Xie; Yang Zhang; Xiaofen Yu; Guangyuan He; Yin Li; Guangxiao Yang
Journal:  Plant Physiol       Date:  2022-08-29       Impact factor: 8.005

3.  Reconstructing the genome of the most recent common ancestor of flowering plants.

Authors:  Florent Murat; Alix Armero; Caroline Pont; Christophe Klopp; Jérôme Salse
Journal:  Nat Genet       Date:  2017-03-13       Impact factor: 38.330

4.  Cantaloupe melon genome reveals 3D chromatin features and structural relationship with the ancestral cucurbitaceae karyotype.

Authors:  Clement Pichot; Anis Djari; Joseph Tran; Marion Verdenaud; William Marande; Cecile Huneau; Veronique Gautier; David Latrasse; Sandrine Arribat; Vivien Sommard; Christelle Troadec; Charles Poncet; Mohammed Bendahmane; Judit Szecsi; Catherine Dogimont; Jerome Salse; Moussa Benhamed; Mohamed Zouine; Adnane Boualem; Abdelhafid Bendahmane
Journal:  iScience       Date:  2021-12-25

5.  Oak genome reveals facets of long lifespan.

Authors:  Christophe Plomion; Jean-Marc Aury; Joëlle Amselem; Thibault Leroy; Florent Murat; Sébastien Duplessis; Sébastien Faye; Nicolas Francillonne; Karine Labadie; Grégoire Le Provost; Isabelle Lesur; Jérôme Bartholomé; Patricia Faivre-Rampant; Annegret Kohler; Jean-Charles Leplé; Nathalie Chantret; Jun Chen; Anne Diévart; Tina Alaeitabar; Valérie Barbe; Caroline Belser; Hélène Bergès; Catherine Bodénès; Marie-Béatrice Bogeat-Triboulot; Marie-Lara Bouffaud; Benjamin Brachi; Emilie Chancerel; David Cohen; Arnaud Couloux; Corinne Da Silva; Carole Dossat; François Ehrenmann; Christine Gaspin; Jacqueline Grima-Pettenati; Erwan Guichoux; Arnaud Hecker; Sylvie Herrmann; Philippe Hugueney; Irène Hummel; Christophe Klopp; Céline Lalanne; Martin Lascoux; Eric Lasserre; Arnaud Lemainque; Marie-Laure Desprez-Loustau; Isabelle Luyten; Mohammed-Amin Madoui; Sophie Mangenot; Clémence Marchal; Florian Maumus; Jonathan Mercier; Célia Michotey; Olivier Panaud; Nathalie Picault; Nicolas Rouhier; Olivier Rué; Camille Rustenholz; Franck Salin; Marçal Soler; Mika Tarkka; Amandine Velt; Amy E Zanne; Francis Martin; Patrick Wincker; Hadi Quesneville; Antoine Kremer; Jérôme Salse
Journal:  Nat Plants       Date:  2018-06-18       Impact factor: 15.793

6.  The chromosome-scale reference genome of black pepper provides insight into piperine biosynthesis.

Authors:  Lisong Hu; Zhongping Xu; Maojun Wang; Rui Fan; Daojun Yuan; Baoduo Wu; Huasong Wu; Xiaowei Qin; Lin Yan; Lehe Tan; Soonliang Sim; Wen Li; Christopher A Saski; Henry Daniell; Jonathan F Wendel; Keith Lindsey; Xianlong Zhang; Chaoyun Hao; Shuangxia Jin
Journal:  Nat Commun       Date:  2019-10-16       Impact factor: 14.919

7.  Comparatively Barcoded Chromosomes of Brachypodium Perennials Tell the Story of Their Karyotype Structure and Evolution.

Authors:  Joanna Lusinska; Alexander Betekhtin; Diana Lopez-Alvarez; Pilar Catalan; Glyn Jenkins; Elzbieta Wolny; Robert Hasterok
Journal:  Int J Mol Sci       Date:  2019-11-07       Impact factor: 5.923

8.  A chromosome-scale genome sequence of pitaya (Hylocereus undatus) provides novel insights into the genome evolution and regulation of betalain biosynthesis.

Authors:  Jian-Ye Chen; Fang-Fang Xie; Yan-Ze Cui; Can-Bin Chen; Wang-Jin Lu; Xiao-di Hu; Qing-Zhu Hua; Jing Zhao; Zhi-Jiang Wu; Dan Gao; Zhi-Ke Zhang; Wen-Kai Jiang; Qing-Ming Sun; Gui-Bing Hu; Yong-Hua Qin
Journal:  Hortic Res       Date:  2021-07-06       Impact factor: 6.793

9.  The Rosa genome provides new insights into the domestication of modern roses.

Authors:  Olivier Raymond; Jérôme Gouzy; Jérémy Just; Hélène Badouin; Marion Verdenaud; Arnaud Lemainque; Philippe Vergne; Sandrine Moja; Nathalie Choisne; Caroline Pont; Sébastien Carrère; Jean-Claude Caissard; Arnaud Couloux; Ludovic Cottret; Jean-Marc Aury; Judit Szécsi; David Latrasse; Mohammed-Amin Madoui; Léa François; Xiaopeng Fu; Shu-Hua Yang; Annick Dubois; Florence Piola; Antoine Larrieu; Magali Perez; Karine Labadie; Lauriane Perrier; Benjamin Govetto; Yoan Labrousse; Priscilla Villand; Claudia Bardoux; Véronique Boltz; Céline Lopez-Roques; Pascal Heitzler; Teva Vernoux; Michiel Vandenbussche; Hadi Quesneville; Adnane Boualem; Abdelhafid Bendahmane; Chang Liu; Manuel Le Bris; Jérôme Salse; Sylvie Baudino; Moussa Benhamed; Patrick Wincker; Mohammed Bendahmane
Journal:  Nat Genet       Date:  2018-04-30       Impact factor: 38.330

10.  Chromosome identification and reconstruction of evolutionary rearrangements in Brachypodium distachyon, B. stacei and B. hybridum.

Authors:  Joanna Lusinska; Joanna Majka; Alexander Betekhtin; Karolina Susek; Elzbieta Wolny; Robert Hasterok
Journal:  Ann Bot       Date:  2018-08-27       Impact factor: 4.357
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.