Literature DB >> 26984473

Trends in the Design and Development of Specific Aptamers Against Peptides and Proteins.

Maryam Tabarzad1, Marzieh Jafari2.   

Abstract

Aptamers are single stranded oligonucleotides, comparable to monoclonal antibodies (mAbs) in selectivity and affinity and have significant strategic properties in design, development and applications more than mAbs. Ease of design and development, simple chemical modification and the attachment of functional groups, easily handling and more adaptability with analytical methods, small size and adaptation with nanostructures are the valuable characteristics of aptamers in comparison to large protein based ligands. Among a broad range of targets that their specific aptamers developed, proteins and peptides have significant position according to the number of related studies performed so far. Since proteins control many of important physiological and pathological incidents in the living organisms, particularly human beings and because of the benefits of aptamers in clinical and analytical applications, aptamer related technologies in the field of proteins and peptides are under progress, exclusively. Currently, there is only one FDA approved therapeutic aptamer in the pharmaceutical market, which is specific to vascular endothelial growth factor and is prescribed for age related macular degenerative disease. Additionally, there are several aptamers in the different phases of clinical trials. Almost all of these aptamers are specific to clinically important peptide or protein targets. In addition, the application of protein specific aptamers in the design and development of targeted drug delivery systems and diagnostic biosensors is another interesting field of aptamer technology. In this review, significant efforts related to development and applications of aptamer technologies in proteins and peptides sciences were considered to emphasis on the importance of aptamers in medicinal and clinical applications.

Entities:  

Keywords:  Analytical; Aptamer; Diagnostic; Protein; SELEX; Therapeutic

Mesh:

Substances:

Year:  2016        PMID: 26984473     DOI: 10.1007/s10930-016-9653-2

Source DB:  PubMed          Journal:  Protein J        ISSN: 1572-3887            Impact factor:   2.371


  244 in total

1.  Signal amplification for thrombin impedimetric aptasensor: sandwich protocol and use of gold-streptavidin nanoparticles.

Authors:  Cristina Ocaña; Manel del Valle
Journal:  Biosens Bioelectron       Date:  2013-11-07       Impact factor: 10.618

2.  Aptamer-based single-molecule imaging of insulin receptors in living cells.

Authors:  Minhyeok Chang; Mijin Kwon; Sooran Kim; Na-Oh Yunn; Daehyung Kim; Sung Ho Ryu; Jong-Bong Lee
Journal:  J Biomed Opt       Date:  2014-05       Impact factor: 3.170

3.  A reusable and sensitive biosensor for total mercury in canned fish based on fluorescence polarization.

Authors:  Tongfei Shen; Qiaoli Yue; Xiuxiu Jiang; Lei Wang; Shuling Xu; Haibo Li; Xiaohong Gu; Shuqiu Zhang; Jifeng Liu
Journal:  Talanta       Date:  2013-08-30       Impact factor: 6.057

4.  Tuning riboswitch-mediated gene regulation by rational control of aptamer ligand binding properties.

Authors:  Ambadas B Rode; Tamaki Endoh; Naoki Sugimoto
Journal:  Angew Chem Int Ed Engl       Date:  2014-12-02       Impact factor: 15.336

5.  Highly sensitive fluorescence detection of target DNA by coupling exonuclease-assisted cascade target recycling and DNAzyme amplification.

Authors:  Shufeng Liu; Chuanbin Cheng; Tao Liu; Li Wang; Hongwei Gong; Feng Li
Journal:  Biosens Bioelectron       Date:  2014-07-16       Impact factor: 10.618

6.  Spatially marking and quantitatively counting membrane immunoglobulin M in live cells via Ag cluster-aptamer probes.

Authors:  Ru Liu; Jiao Zhai; Li Liu; Yaling Wang; Yueteng Wei; Xinglu Jiang; Liang Gao; Huarui Zhu; Yuliang Zhao; Zhifang Chai; Xueyun Gao
Journal:  Chem Commun (Camb)       Date:  2014-04-07       Impact factor: 6.222

7.  PEGylation and biodistribution of an anti-MUC1 aptamer in MCF-7 tumor-bearing mice.

Authors:  Chiara Da Pieve; Elaine Blackshaw; Sotiris Missailidis; Alan C Perkins
Journal:  Bioconjug Chem       Date:  2012-06-25       Impact factor: 4.774

8.  Antagonistic RNA aptamer specific to a heterodimeric form of human interleukin-17A/F.

Authors:  Hironori Adachi; Akira Ishiguro; Michiaki Hamada; Eri Sakota; Kiyoshi Asai; Yoshikazu Nakamura
Journal:  Biochimie       Date:  2011-04-19       Impact factor: 4.079

9.  Electrochemical detection of thrombin by sandwich approach using antibody and aptamer.

Authors:  Yan Kang; Ke-Jun Feng; Ji-Wei Chen; Jian-Hui Jiang; Guo-Li Shen; Ru-Qin Yu
Journal:  Bioelectrochemistry       Date:  2008-05-02       Impact factor: 5.373

10.  An improved SELEX-Seq strategy for characterizing DNA-binding specificity of transcription factor: NF-κB as an example.

Authors:  Guangming Gu; Tingting Wang; Yang Yang; Xinhui Xu; Jinke Wang
Journal:  PLoS One       Date:  2013-10-10       Impact factor: 3.240

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  10 in total

Review 1.  The research of aptamer biosensor technologies for detection of microorganism.

Authors:  Jiecan Yi; Wen Xiao; Guiyin Li; Pian Wu; Yayuan He; Cuimei Chen; Yafei He; Ping Ding; Tianhan Kai
Journal:  Appl Microbiol Biotechnol       Date:  2020-10-13       Impact factor: 4.813

2.  Calcium Influx of Mast Cells Is Inhibited by Aptamers Targeting the First Extracellular Domain of Orai1.

Authors:  Renshan Sun; Yongqiang Yang; Xinze Ran; Tao Yang
Journal:  PLoS One       Date:  2016-07-08       Impact factor: 3.240

3.  Optimization of Aflatoxin B1 Aptasensing.

Authors:  Marzieh Jafari; Mohsen Rezaei; Heibatullah Kalantari; Maryam Tabarzad; Bahram Daraei
Journal:  J Toxicol       Date:  2017-05-14

4.  Altered stoichiometry of an evolved RNA aptamer.

Authors:  Shoji Ohuchi; Beatrix Suess
Journal:  RNA       Date:  2017-12-28       Impact factor: 4.942

Review 5.  Breaking Barriers: Bioinspired Strategies for Targeted Neuronal Delivery to the Central Nervous System.

Authors:  Ana P Spencer; Marília Torrado; Beatriz Custódio; Sara C Silva-Reis; Sofia D Santos; Victoria Leiro; Ana P Pêgo
Journal:  Pharmaceutics       Date:  2020-02-23       Impact factor: 6.321

6.  Aptamer-targeting of Aleutian mink disease virus (AMDV) can be an effective strategy to inhibit virus replication.

Authors:  Taofeng Lu; Hui Zhang; Jie Zhou; Qin Ma; Wenzhuo Yan; Lili Zhao; Shuguang Wu; Hongyan Chen
Journal:  Sci Rep       Date:  2021-02-25       Impact factor: 4.379

Review 7.  Preparation, applications, and challenges of functional DNA nanomaterials.

Authors:  Lei Zhang; Mengge Chu; Cailing Ji; Jie Tan; Quan Yuan
Journal:  Nano Res       Date:  2022-08-31       Impact factor: 10.269

8.  High throughput sequencing analysis of RNA libraries reveals the influences of initial library and PCR methods on SELEX efficiency.

Authors:  Mayumi Takahashi; Xiwei Wu; Michelle Ho; Pritsana Chomchan; John J Rossi; John C Burnett; Jiehua Zhou
Journal:  Sci Rep       Date:  2016-09-22       Impact factor: 4.379

Review 9.  Unraveling Prion Protein Interactions with Aptamers and Other PrP-Binding Nucleic Acids.

Authors:  Bruno Macedo; Yraima Cordeiro
Journal:  Int J Mol Sci       Date:  2017-05-17       Impact factor: 5.923

Review 10.  Therapeutic applications of nucleic acid aptamers in microbial infections.

Authors:  Shima Afrasiabi; Maryam Pourhajibagher; Reza Raoofian; Maryam Tabarzad; Abbas Bahador
Journal:  J Biomed Sci       Date:  2020-01-03       Impact factor: 8.410

  10 in total

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