| Literature DB >> 26975566 |
Yinfeng Kang1,2,3,4, Minsha Feng1,2,3,4, Xiaqiong Zhao1,2,3,4, Xu Dai1,2,3,4, Bin Xiang1,2,3,4, Pei Gao1,2,3,4, Yulian Li1,2,3,4, Yanling Li1,2,3,4, Tao Ren5,6,7,8.
Abstract
BACKGROUND: Chickens and ducks are major hosts of Newcastle disease virus (NDV) with distinct responses to infection. However, whereas ducks are generally asymptomatic or exhibit only mild symptoms following NDV infection and are thus regarded as potential long-term reservoirs of the virus, chickens exhibit severe clinical lesions, transient infections and even death due to NDV infection. These differences may in part result from the host innate immune response to NDV infection.Entities:
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Year: 2016 PMID: 26975566 PMCID: PMC4791923 DOI: 10.1186/s12985-016-0499-1
Source DB: PubMed Journal: Virol J ISSN: 1743-422X Impact factor: 4.099
Primer sequences for quantitative real-time polymerase chain reaction
| RNA target | Forward primer (5' → 3') | Reverse primer (5' → 3') | Product size (bp) | GenBank accession no. |
|---|---|---|---|---|
| Chicken | ||||
| GAPDH | CCTCTCTGGCAAAGTCCAAG | CATCTGCCCATTTGATGTTG | 200 | NM_204305 |
| TLR3 | ACAATGGCAGATTGTAGTCACCT | GCACAATCCTGGTTTCAGTTTAG | 123 | NM_001011691 |
| TLR7 | TGTGATGTGGAAGCCTTTGA | ATTATCTTTGGGCCCCAGTC | 218 | DQ780342 |
| IL-1β | GCTCTACATGTCGTGTGTGATGAG | TGTCGATGTCCCGCATGA | 80 | NM204524 |
| IL-6 | CCTGTTCGCCTTTCAGACCT | GGGATGACCACTTCATCGGG | 171 | EU170468 |
| IL-8 | ATTCAAGATGTGAAGCTGAC | AGGATCTGCAATTAACATGAGG | 196 | DQ393272 |
| LITAF | CCGCCCAGTTCAGATGAGTT | GCAACAACCAGCTATGCACC | 130 | AY765397 |
| IFN-a | ATGCCACCTTCTCTCACGAC | AGGCGCTGTAATCGTTGTCT | 387 | EU367971 |
| IFN-r | TGAGCCAGATTGTTTCGATG | CTTGGCCAGGTCCATGATA | 248 | DQ906156 |
| MHC-I | AAGAAGGGGAAGGGCTACAA | AAGCAGTGCAGGCAAAGAAT | 222 | NM001031338 |
| MHC-II | CTCGAGGTCATGATCAGCAA | TGTAAACGTCTCCCCTTTGG | 312 | DQ008588 |
| Duck | ||||
| GAPDH | ATGTTCGTGATGGGTGTGAA | CTGTCTTCGTGTGTGGCTGT | 176 | AY436595 |
| TLR3 | GAGTTTCACACAGGATGTTTAC | GTGAGATTTGTTCCTTGCAG | 200 | NM_001310782 |
| TLR7 | CCTTTCCCAGAGAGCATTCA | TCAAGAAATATCAAGATAATCACATCA | 154 | AY940195 |
| IL-1β | TCGACATCAACCAGAAGTGC | GAGCTTGTAGCCCTTGATGC | 185 | DQ393268 |
| IL-6 | TTCGACGAGGAGAAATGCTT | CCTTATCGTCGTTGCCAGAT | 150 | AB191038 |
| IL-8 | AAGTTCATCCACCCTAAATC | GCATCAGAATTGAGCTGAGC | 174 | AB236334 |
| LITAF | ACAGGACAGCCTATGCCAAC | CATCTGAACTGGGCGGTCAT | 96 | EU375296 |
| IFN-a | TCCTCCAACACCTCTTCGAC | GGGCTGTAGGTGTGGTTCTG | 232 | EF053034 |
| IFN-r | GCTGATGGCAATCCTGTTTT | GGATTTTCAAGCCAGTCAGC | 247 | AJ012254 |
| MHC-I | GAAGGAAGAGACTTCATTGCCTTGG | CTCTCCTCTCCAGTACGTCCTTCC | 196 | AB115246 |
| MHC-II | CCACCTTTACCAGCTTCGAG | CCGTTCTTCATCCAGGTGAT | 229 | AY905539 |
| Chicken and Duck IFN-β | CCTCAACCAGATCCAGCATT | GGATGAGGCTGTGAGAGGAG | 259 | AY831397 |
Fig. 1Comparison of multicycle growth kinetics and progeny virus outputs of SS-10 and NH-10 strains on chicken embryo fibroblasts (CEFs) and duck embryo fibroblasts (DEFs). CEFs and DEFs were inoculated with SS-10 (a) and NH-10 (b) at a moi of 1, and cell supernatant was sampled at the time points indicated. Virus titers in the cell supernatant were determined in CEFs via plaque assay. SS-10 (c) and NH-10 (d) at a moi of 1 conferred higher levels of accumulation of P/V/W gene RNA in CEFs than in DEFs. Values represent averages of the results from three independent experiments with standard error bars. *p < .05, **p < .01, ***p < .001, as determined by an unpaired Student’s t-test
Fig. 2The expression of TLRs TLR3 (a) and TLR7 (b) in chicken embryo fibroblasts (CEFs) and duck embryo fibroblasts (DEFs) following infection with SS-10 and NH-10 or treatment with poly(I:C) at 6, 24 and 36 h p.i. Data represent the mean fold change expression of either CEFs and DEFs compared with mock-infected controls after normalization to the expression of the housekeeping gene glyceraldehyde-3-phosphate-dehydrogenase. Significance was analyzed with two-way analyses of variance between the SS-10 and NH-10 groups in CEFs and DEFs at each time point (*p < .05, *p < .01, *p < .001). Error bars represent SD
Fig. 3Proinflammatory cytokines IL-1beta (a), IL-6 (b), LITAF (c) and chemokine IL-8 (d) expression in chicken embryo fibroblasts (CEFs) and duck embryo fibroblasts (DEFs) following infection with SS-10 and NH-10 or treatment with poly(I:C) at 6, 24 and 36 h p.i. Data represent the mean fold change expression of either CEFs and DEFs compared with mock-infected controls after normalization to the expression of the housekeeping gene glyceraldehyde-3-phosphate-dehydrogenase. Significance was analyzed with two-way analyses of variance between the SS-10 and NH-10 groups in CEFs and DEFs at each time point (*p < .05, **p < .01, ***p < .001). Error bars represent SD
Fig. 4Type I and II interferon (IFN)-alpha (a), IFN-beta (b) and IFN-gamma (c) expression in chicken embryo fibroblasts (CEFs) and duck embryo fibroblasts (DEFs) following infection with SS-10 and NH-10 or treatment with poly(I:C) at 6, 24 and 36 h p.i. Data represent the mean fold change expression of either CEFs and DEFs compared with mock-infected controls after normalization to the expression of the housekeeping gene glyceraldehyde-3-phosphate-dehydrogenase. Significance was analyzed with two-way analyses of variance between the SS-10 and NH-10 groups in CEFs and DEFs at each time point (*p < .05, **p < .01, ***p < .001). Error bars represent SD
Fig. 5MHC I (a) and II (b) expression in chicken embryo fibroblasts (CEFs) and duck embryo fibroblasts (DEFs) following infection with SS-10 and NH-10 or treatment with poly(I:C) at 6, 24 and 36 h p.i. Data represent the mean fold change expression of either CEFs and DEFs compared with mock-infected control after normalization to the expression of the housekeeping gene glyceraldehyde-3-phosphate-dehydrogenase. Significance was analyzed with two-way analyses of variance between the SS-10 and NH-10 groups in CEFs and DEFs at each time point (*p < .05, **p < .01, ***p < .001). Error bars represent SD