Literature DB >> 26973983

Compression in Molecular Simulation Datasets.

Anand Kumar1, Xingquan Zhu2, Yi-Cheng Tu1, Sagar Pandit3.   

Abstract

In this paper, we present a compression framework, for molecular dynamics (MD) simulation data, which yields significant performance by combining the strength of principal component analysis (PCA) and discrete cosine transform (DCT). Though it is a lossy compression technique, the effect on analytics performed on decompressed data is very minimal. Compression ratio up to 13 is achieved with acceptable errors in results of analytical functions.

Entities:  

Keywords:  compression ratio; data compression; discrete cosine transform; encoding; molecular simulations; principal component analysis

Year:  2013        PMID: 26973983      PMCID: PMC4786188          DOI: 10.1007/978-3-642-42057-3_4

Source DB:  PubMed          Journal:  Intell Sci Big Data Eng (2013)


  1 in total

1.  Essential Dynamics:  A Tool for Efficient Trajectory Compression and Management.

Authors:  Tim Meyer; Carles Ferrer-Costa; Alberto Pérez; Manuel Rueda; Axel Bidon-Chanal; F Javier Luque; Charles A Laughton; Modesto Orozco
Journal:  J Chem Theory Comput       Date:  2006-03       Impact factor: 6.006

  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.