Literature DB >> 26973231

Complete genome sequence of yam chlorotic necrotic mosaic virus from Dioscorea parviflora.

Pengyuan Zhang1, Jiejun Peng2, Huachun Guo3, Jianping Chen2, Suiyun Chen1, Jianguang Wang4.   

Abstract

The complete genome sequence of yam chlorotic necrotic mosaic virus (YCNMV) was determined. It is a monopartite ssRNA 8208 nucleotides in length (excluding the poly(A) tail) and encoding a polyprotein of 2622 amino acids. Sequence analysis showed that the P1 region and some conserved motifs, such as the typical potyvirus aphid-transmission motifs DAG, PTK and KITC, are absent. Phylogenetic analysis based on the complete polyprotein sequences of YCNMV and selected members of the family Potyviridae clearly showed that this virus should be assigned to the genus Macluravirus and suggest that YCNMV is a new member of the genus Macluravirus.

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Year:  2016        PMID: 26973231     DOI: 10.1007/s00705-016-2818-7

Source DB:  PubMed          Journal:  Arch Virol        ISSN: 0304-8608            Impact factor:   2.574


  5 in total

Review 1.  Viruses of Yams (Dioscorea spp.): Current Gaps in Knowledge and Future Research Directions to Improve Disease Management.

Authors:  Mame Boucar Diouf; Ruth Festus; Gonçalo Silva; Sébastien Guyader; Marie Umber; Susan Seal; Pierre Yves Teycheney
Journal:  Viruses       Date:  2022-08-26       Impact factor: 5.818

Review 2.  A Review of Viruses Infecting Yam (Dioscorea spp.).

Authors:  Guo-Fu Luo; Ana Podolyan; Dawit B Kidanemariam; Carmel Pilotti; Gary Houliston; Amit C Sukal
Journal:  Viruses       Date:  2022-03-23       Impact factor: 5.818

3.  Complete Genome Sequence of Chinese Yam Necrotic Mosaic Virus from Dioscorea opposita in the Republic of Korea.

Authors:  Joong-Hwan Lee; Chang-Gi Son; Joong-Bae Kwon; Hyo-Hun Nam; Yeongtae Kim; Su-Heon Lee; Fumei Zhao; Jae Sun Moon
Journal:  Genome Announc       Date:  2016-08-04

4.  Nanopore-based detection and characterization of yam viruses.

Authors:  Denis Filloux; Emmanuel Fernandez; Etienne Loire; Lisa Claude; Serge Galzi; Thierry Candresse; Stephan Winter; M L Jeeva; T Makeshkumar; Darren P Martin; Philippe Roumagnac
Journal:  Sci Rep       Date:  2018-12-14       Impact factor: 4.379

5.  Molecular Viral Diagnosis and Sanitation of Yam Genetic Resources: Implications for Safe Yam Germplasm Exchange.

Authors:  Marie Umber; Denis Filloux; Suzia Gélabale; Rose-Marie Gomez; Armelle Marais; Séverine Gallet; Franciane Gamiette; Claudie Pavis; Pierre-Yves Teycheney
Journal:  Viruses       Date:  2020-09-29       Impact factor: 5.048

  5 in total

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