Literature DB >> 26972765

FRAME (Force Review Automation Environment): MATLAB-based AFM data processor.

Kostyantyn R Partola1, George Lykotrafitis2.   

Abstract

Data processing of force-displacement curves generated by atomic force microscopes (AFMs) for elastic moduli and unbinding event measurements is very time consuming and susceptible to user error or bias. There is an evident need for consistent, dependable, and easy-to-use AFM data processing software. We have developed an open-source software application, the force review automation environment (or FRAME), that provides users with an intuitive graphical user interface, automating data processing, and tools for expediting manual processing. We did not observe a significant difference between manually processed and automatically processed results from the same data sets.
Copyright © 2016 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  Atomic force microscopy; Data processing

Mesh:

Year:  2016        PMID: 26972765     DOI: 10.1016/j.jbiomech.2016.02.035

Source DB:  PubMed          Journal:  J Biomech        ISSN: 0021-9290            Impact factor:   2.712


  6 in total

1.  FEATHER: Automated Analysis of Force Spectroscopy Unbinding and Unfolding Data via a Bayesian Algorithm.

Authors:  Patrick R Heenan; Thomas T Perkins
Journal:  Biophys J       Date:  2018-08-07       Impact factor: 4.033

2.  Regulation of Active ICAM-4 on Normal and Sickle Cell Disease RBCs via AKAPs Is Revealed by AFM.

Authors:  Jing Zhang; Krithika Abiraman; Sasia-Marie Jones; George Lykotrafitis; Biree Andemariam
Journal:  Biophys J       Date:  2017-01-10       Impact factor: 4.033

3.  KCa2 channel localization and regulation in the axon initial segment.

Authors:  Krithika Abiraman; Anastasios V Tzingounis; George Lykotrafitis
Journal:  FASEB J       Date:  2018-01-05       Impact factor: 5.191

4.  Modeling of the axon membrane skeleton structure and implications for its mechanical properties.

Authors:  Yihao Zhang; Krithika Abiraman; He Li; David M Pierce; Anastasios V Tzingounis; George Lykotrafitis
Journal:  PLoS Comput Biol       Date:  2017-02-27       Impact factor: 4.475

5.  FC_analysis: a tool for investigating atomic force microscopy maps of force curves.

Authors:  Simone Dinarelli; Marco Girasole; Giovanni Longo
Journal:  BMC Bioinformatics       Date:  2018-07-06       Impact factor: 3.169

6.  Valsartan impedes epinephrine-induced ICAM-4 activation on normal, sickle cell trait and sickle cell disease red blood cells.

Authors:  Jing Zhang; Sasia-Marie Jones; George Lykotrafitis; Biree Andemariam
Journal:  PLoS One       Date:  2019-05-13       Impact factor: 3.240

  6 in total

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