Literature DB >> 26971231

Detection and characterisation of the biopollutant Xenostrobus securis (Lamarck 1819) Asturian population from DNA Barcoding and eBarcoding.

Floriaan Devloo-Delva1, Laura Miralles1, Alba Ardura2, Yaisel J Borrell1, Ivana Pejovic1, Valentina Tsartsianidou1, Eva Garcia-Vazquez3.   

Abstract

DNA efficiently contributes to detect and understand marine invasions. In 2014 the potential biological pollutant pygmy mussel (Xenostrobus securis) was observed for the first time in the Avilés estuary (Asturias, Bay of Biscay). The goal of this study was to assess the stage of invasion, based on demographic and genetic (DNA Barcoding) characteristics, and to develop a molecular tool for surveying the species in environmental DNA. A total of 130 individuals were analysed for the DNA Barcode cytochrome oxidase I gene in order to determine genetic diversity, population structure, expansion trends, and to inferring introduction hits. Reproduction was evidenced by bimodal size distributions of 1597 mussels. High population genetic variation and genetically distinct clades might suggest multiple introductions from several source populations. Finally, species-specific primers were developed within the DNA barcode for PCR amplification from water samples in order to enabling rapid detection of the species in initial expansion stages.
Copyright © 2016 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  Barcoding; Bay of Biscay; Xenostrobus securis; biological invasion; environmental DNA; phylogenetic expansion signals

Mesh:

Substances:

Year:  2016        PMID: 26971231     DOI: 10.1016/j.marpolbul.2016.03.008

Source DB:  PubMed          Journal:  Mar Pollut Bull        ISSN: 0025-326X            Impact factor:   5.553


  8 in total

1.  An Easy Phylogenetically Informative Method to Trace the Globally Invasive Potamopyrgus Mud Snail from River's eDNA.

Authors:  Laura Clusa; Alba Ardura; Fiona Gower; Laura Miralles; Valentina Tsartsianidou; Anastasija Zaiko; Eva Garcia-Vazquez
Journal:  PLoS One       Date:  2016-10-05       Impact factor: 3.240

2.  An extremely sensitive nested PCR-RFLP mitochondrial marker for detection and identification of salmonids in eDNA from water samples.

Authors:  Laura Clusa; Alba Ardura; Sara Fernández; Agustín A Roca; Eva García-Vázquez
Journal:  PeerJ       Date:  2017-02-28       Impact factor: 2.984

3.  Epigenetic signatures of invasive status in populations of marine invertebrates.

Authors:  Alba Ardura; Anastasija Zaiko; Paloma Morán; Serge Planes; Eva Garcia-Vazquez
Journal:  Sci Rep       Date:  2017-02-16       Impact factor: 4.379

4.  Environmental DNA for freshwater fish monitoring: insights for conservation within a protected area.

Authors:  Sara Fernandez; Miguel M Sandin; Paul G Beaulieu; Laura Clusa; Jose L Martinez; Alba Ardura; Eva García-Vázquez
Journal:  PeerJ       Date:  2018-03-06       Impact factor: 2.984

5.  eDNA for detection of five highly invasive molluscs. A case study in urban rivers from the Iberian Peninsula.

Authors:  Laura Clusa; Laura Miralles; Ana Basanta; Carmelo Escot; Eva García-Vázquez
Journal:  PLoS One       Date:  2017-11-15       Impact factor: 3.240

6.  Sequencing and analyses on chloroplast genomes of Tetrataenium candicans and two allies give new insights on structural variants, DNA barcoding and phylogeny in Apiaceae subfamily Apioideae.

Authors:  Lu Kang; Dengfeng Xie; Qunying Xiao; Chang Peng; Yan Yu; Xingjin He
Journal:  PeerJ       Date:  2019-11-21       Impact factor: 2.984

7.  DNA barcodes of Antipode marine invertebrates in Bay of Biscay and Gulf of Lion ports suggest new biofouling challenges.

Authors:  L Miralles; A Ardura; L Clusa; E Garcia-Vazquez
Journal:  Sci Rep       Date:  2018-11-01       Impact factor: 4.379

8.  Stress related epigenetic changes may explain opportunistic success in biological invasions in Antipode mussels.

Authors:  Alba Ardura; Laura Clusa; Anastasija Zaiko; Eva Garcia-Vazquez; Laura Miralles
Journal:  Sci Rep       Date:  2018-07-17       Impact factor: 4.379

  8 in total

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