Literature DB >> 26970672

Clinical effect of molecular methods in sarcoma diagnosis (GENSARC): a prospective, multicentre, observational study.

Antoine Italiano1, Ilaria Di Mauro2, Jocelyn Rapp2, Gaëlle Pierron3, Nathalie Auger4, Laurent Alberti5, Frédéric Chibon6, Fabienne Escande7, Anne-Claire Voegeli8, Jean-Pierre Ghnassia9, Frédérique Keslair2, Marick Laé10, Dominique Ranchère-Vince5, Philippe Terrier4, Sandrine Baffert11, Jean-Michel Coindre6, Florence Pedeutour2.   

Abstract

BACKGROUND: Advances in molecular genetics of sarcoma have enabled the identification of type-specific aberrations. We aimed to assess the clinical effect of systematic implementation of molecular assays to improve sarcoma misdiagnosis.
METHODS: In this multicentre, observational study, we recruited patients from 32 centres of the French Sarcoma Group/Reference Network in Pathology of Sarcomas. Eligibility criteria included: biopsy or surgical resection; suspicion of: dermatofibrosarcoma protuberans (cohort 1), dedifferentiated liposarcoma (cohort 2), Ewing's sarcoma family of tumours (cohort 3), synovial sarcoma (cohort 4), alveolar rhabdomyosarcoma (cohort 5), and myxoid or round cell liposarcoma (cohort 6); review by one sarcoma-expert pathologist; availability of frozen material (except for cohort 1 of patients with dermatofibrosarcoma protuberans because anti-CD34 immunohistochemistry is performed on paraffin-embedded tissue); and patient information. For each case, the pathologist made one primary diagnosis followed by up to two differential diagnoses, based on histological characteristics only. Each diagnosis was classified as certain, probable, or possible. For each case to determine the molecular classification, we did fluorescence in-situ hybridisation on paraffin-embedded samples. We also did comparative genomic hybridisation and quantitative PCR (cohort 2) or reverse transcriptase PCR (cohorts 3-6) on frozen and paraffin-embedded samples. We made a final diagnosis based on the molecular results. The clinical effect of diagnosis correction was assessed by a board of experts. FINDING: Between June 22, 2009, and Oct 30, 2012, 395 patients were enrolled in the study, of which 384 were eligible for inclusion. The diagnosis was eventually modified by molecular genetics for 53 patients: eight (16%) of 50 patients with dermatofibrosarcoma (cohort 1), seven (23%) of 30 patients with dedifferentiated liposarcoma (cohort 2), 13 (12%) of 112 with Ewing's sarcoma family of tumours (cohort 3), 16 (16%) of 97 patients with synovial sarcoma (cohort 4), seven (15%) of 46 patients with alveolar rhabdomyosarcoma (cohort 5), and two (4%) of 49 patients with myxoid or round cell liposarcoma (cohort 6), with an effect on primary management or prognosis assessment in 45 cases.
INTERPRETATION: Molecular genetic testing should be mandatory for diagnostic accuracy of sarcoma and appropriate clinical management, even when histological diagnosis is made by pathologist experts in this field. FUNDING: French National Cancer Institute and Nice University Hospital.
Copyright © 2016 Elsevier Ltd. All rights reserved.

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Year:  2016        PMID: 26970672     DOI: 10.1016/S1470-2045(15)00583-5

Source DB:  PubMed          Journal:  Lancet Oncol        ISSN: 1470-2045            Impact factor:   41.316


  35 in total

Review 1.  Management of metastatic retroperitoneal sarcoma: a consensus approach from the Trans-Atlantic Retroperitoneal Sarcoma Working Group (TARPSWG).

Authors: 
Journal:  Ann Oncol       Date:  2018-04-01       Impact factor: 32.976

2.  Targetable Alterations in Adult Patients With Soft-Tissue Sarcomas: Insights for Personalized Therapy.

Authors:  Carlo Lucchesi; Emmanuel Khalifa; Yec'han Laizet; Isabelle Soubeyran; Simone Mathoulin-Pelissier; Christine Chomienne; Antoine Italiano
Journal:  JAMA Oncol       Date:  2018-10-01       Impact factor: 31.777

3.  Salivary Gland Cancer in the Era of Routine Next-Generation Sequencing.

Authors:  Emilija Todorovic; Brendan C Dickson; Ilan Weinreb
Journal:  Head Neck Pathol       Date:  2020-03-02

Review 4.  Dermatofibrosarcoma Protuberans.

Authors:  Alvaro E Acosta; Catalina Santa Vélez
Journal:  Curr Treat Options Oncol       Date:  2017-08-10

5.  Detection of sarcoma fusions by a next-generation sequencing based-ligation-dependent multiplex RT-PCR assay.

Authors:  Marie-Delphine Lanic; François Le Loarer; Vinciane Rainville; Vincent Sater; Mathieu Viennot; Ludivine Beaussire; Pierre-Julien Viailly; Emilie Angot; Isabelle Hostein; Fabrice Jardin; Philippe Ruminy; Marick Laé
Journal:  Mod Pathol       Date:  2022-01-24       Impact factor: 7.842

Review 6.  Diagnosis of soft tissue tumors using immunohistochemistry as a surrogate for recurrent fusion oncoproteins.

Authors:  Margaret A Black; Gregory W Charville
Journal:  Semin Diagn Pathol       Date:  2021-11-03       Impact factor: 3.464

7.  Genetic Characterization of Pediatric Sarcomas by Targeted RNA Sequencing.

Authors:  Matthew R Avenarius; Cecelia R Miller; Michael A Arnold; Selene Koo; Ryan Roberts; Martin Hobby; Thomas Grossman; Yvonne Moyer; Richard K Wilson; Elaine R Mardis; Julie M Gastier-Foster; Ruthann B Pfau
Journal:  J Mol Diagn       Date:  2020-08-01       Impact factor: 5.568

8.  A novel next generation sequencing approach to improve sarcoma diagnosis.

Authors:  Lauren McConnell; Oisín Houghton; Peter Stewart; Jana Gazdova; Shambhavi Srivastava; Chang Kim; Mark Catherwood; Anna Strobl; Adrienne M Flanagan; Anca Oniscu; Leonie I Kroeze; Patricia Groenen; Philippe Taniere; Manuel Salto-Tellez; David Gonzalez
Journal:  Mod Pathol       Date:  2020-02-11       Impact factor: 7.842

9.  A 3-DNA methylation signature as a novel prognostic biomarker in patients with sarcoma by bioinformatics analysis.

Authors:  Xiao-Wei Wang; Qi Sun; Shi-Bin Xu; Chao Xu; Chen-Jie Xia; Qi-Ming Zhao; Hua-Hui Zhang; Wei-Qiang Tan; Lei Zhang; Shu-Dong Yao
Journal:  Medicine (Baltimore)       Date:  2021-05-21       Impact factor: 1.817

Review 10.  Update of pediatric soft tissue tumors with review of conventional MRI appearance-part 2: vascular lesions, fibrohistiocytic tumors, muscle tumors, peripheral nerve sheath tumors, tumors of uncertain differentiation, and undifferentiated small round cell sarcomas.

Authors:  Ezekiel Maloney; Khalid Al-Dasuqi; Lina Irshaid; Annie Wang; Kimia Kani; Andrew Haims; Jack Porrino
Journal:  Skeletal Radiol       Date:  2021-07-23       Impact factor: 2.199

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