Literature DB >> 26964723

Severe sensitivity loss in an influenza A molecular assay due to antigenic drift variants during the 2014/15 influenza season.

Yarah Overmeire1, Elke Vanlaere1, Anneleen Hombrouck2, Hans De Beenhouwer3, Guus Simons4, Antoinette Brink4, Anne-Marie Van den Abeele1, Charlotte Verfaillie1, Jos Van Acker5.   

Abstract

The 2014-2015 influenza season in Belgium was dominated by the circulation of 2 influenza A(H3N2) subgroups: 3C.2a and 3C.3b. Analysis of 166 nasopharyngeal aspirates, collected in patients with respiratory illness at the start of the epidemic season, showed a decreased sensitivity for the detection of influenza A(H3N2)/3C.2a using a commercially available multiplex assay. Gene sequencing of the matrix protein showed a point mutation (C163T) leading to a mismatch with the assay probes.
Copyright © 2016 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Antigenic drift; Influenza; Laboratory; Laboratory surveillance; Molecular methods

Mesh：

Substances：

Year:  2016        PMID： 26964723     DOI： 10.1016/j.diagmicrobio.2016.02.004

Source DB:  PubMed          Journal:  Diagn Microbiol Infect Dis        ISSN： 0732-8893            Impact factor:   2.803


  8 in total

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Journal:  J Clin Microbiol       Date:  2020-04-23       Impact factor: 5.948

Review 2.  The Drift in Molecular Testing for Influenza: Mutations Affecting Assay Performance.

Authors:  Kathleen A Stellrecht
Journal:  J Clin Microbiol       Date:  2018-02-22       Impact factor: 5.948

3.  Comparison of Six Sample-to-Answer Influenza A/B and Respiratory Syncytial Virus Nucleic Acid Amplification Assays Using Respiratory Specimens from Children.

Authors:  Dithi Banerjee; Neena Kanwar; Ferdaus Hassan; Cynthia Essmyer; Rangaraj Selvarangan
Journal:  J Clin Microbiol       Date:  2018-10-25       Impact factor: 5.948

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Authors:  Hayden C Metsky; Nicole L Welch; Priya P Pillai; Nicholas J Haradhvala; Laurie Rumker; Sreekar Mantena; Yibin B Zhang; David K Yang; Cheri M Ackerman; Juliane Weller; Paul C Blainey; Cameron Myhrvold; Michael Mitzenmacher; Pardis C Sabeti
Journal:  Nat Biotechnol       Date:  2022-03-03       Impact factor: 68.164

5.  Rapid and broad detection of H5 hemagglutinin by an immunochromatographic kit using novel monoclonal antibody against highly pathogenic avian influenza virus belonging to the genetic clade 2.3.4.4.

Authors:  Lam Thanh Nguyen; Kazunari Nakaishi; Keiko Motojima; Ayako Ohkawara; Erina Minato; Junki Maruyama; Takahiro Hiono; Keita Matsuno; Masatoshi Okamatsu; Takashi Kimura; Ayato Takada; Hiroshi Kida; Yoshihiro Sakoda
Journal:  PLoS One       Date:  2017-08-07       Impact factor: 3.240

6.  Effect of genomic drift of influenza PCR tests.

Authors:  Kathleen A Stellrecht; Seela M Nattanmai; Jumshan Butt; Vincente P Maceira; Alvin A Espino; Allan J Castro; Allen Landes; Nicolas Dresser; Shafiq A Butt
Journal:  J Clin Virol       Date:  2017-06-03       Impact factor: 3.168

7.  Panther Fusion® Respiratory Virus Assays for the detection of influenza and other respiratory viruses.

Authors:  Kathleen A Stellrecht; Jesse L Cimino; Lisa I Wilson; Vincente P Maceira; Shafiq A Butt
Journal:  J Clin Virol       Date:  2019-11-09       Impact factor: 3.168

8.  PANDAA intentionally violates conventional qPCR design to enable durable, mismatch-agnostic detection of highly polymorphic pathogens.

Authors:  Iain J MacLeod; Christopher F Rowley; M Essex
Journal:  Commun Biol       Date:  2021-02-18
  8 in total

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