| Literature DB >> 26964044 |
Jintao Chen1, Aiguo Zhou1, Shaolin Xie1, Chao Wang1, Zijun Lv1,2, Jixing Zou1.
Abstract
To understand the molecular responses of mature and immature sperm in the catfish Cranoglanis bouderius, we used the iTRAQ proteomics approach to perform proteomic profiling of spermatogenesis in C. bouderius. As a result, 1,941 proteins were identified, including 361 differentially expressed proteins, 157 upregulated proteins and 204 downregulated proteins in mature sperm relative to immature sperm. All of the identified proteins were categorized into seven types of subcellular localizations and three molecular functions and were found to be involved in nine biological processes. All of the differential proteins were involved in 235 different pathways. Moreover, we found that the tricarboxylic acid (TCA) pathway played an important role in the energy metabolism of sperm and that the EABB pathway was involved in the mechanism of spermatogenesis. Our study is the first to use the iTRAQ-based proteomic approach to analyze the catfish sperm proteome, and the results we obtained using this approach are valuable for understanding the molecular mechanisms of fish spermatogenesis.Entities:
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Year: 2016 PMID: 26964044 PMCID: PMC4786320 DOI: 10.1371/journal.pone.0151254
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Fig 1GO analysis of differential protein profile.
(A) Volcano Plot of differential protein profile, The logarithmic ratios of the protein intensities were plotted against the negative logarithmic p-values of the t-test performed from triplicate experiments. Blue dotted lines separate specific differential proteins marked as red (upregulated) and/or green (downregulated) dots from the background (grey dots). (B) Predicted subcellular localization of proteins. (C) Predicted molecular functions classification of proteins. (D) Predicted biological process classification of proteins. Digit in pie chart indicated the quantity of total proteins and their percentage. Histogram showed the quantity of differential proteins and their percentage, red meant upregulation, downregulation in green.
Fig 2KEGG analysis of differential proteins.
(A) Differential proteins involved in the oxidative phosphorylation pathway, 4.1.1.32: phosphoenolpyruvate carboxykinase (GTP), 1.1.1.41: isocitrate dehydrogenase (NAD+), 1.2.4.2: 2-oxoglutarate dehydrogenase E1 component, 2.3.1.61: 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase), 1.8.1.4: dihydrolipoamide dehydrogenase. (B) Differential proteins involved in the ERBB pathway. Block in red meant upregulation, downregulation in green.