Literature DB >> 26960392

Bacterial communities potentially involved in iron-cycling in Baltic Sea and North Sea sediments revealed by pyrosequencing.

Carolina Reyes1, Olaf Dellwig2, Kirstin Dähnke3, Matthias Gehre4, Beatriz E Noriega-Ortega5, Michael E Böttcher2, Patrick Meister6, Michael W Friedrich7.   

Abstract

To gain insight into the bacterial communities involved in iron-(Fe) cycling under marine conditions, we analysed sediments with Fe-contents (0.5-1.5 wt %) from the suboxic zone at a marine site in the Skagerrak (SK) and a brackish site in the Bothnian Bay (BB) using 16S rRNA gene pyrosequencing. Several bacterial families, including Desulfobulbaceae, Desulfuromonadaceae and Pelobacteraceae and genera, includingDesulfobacterandGeobacter, known to reduce Fe were detected and showed highest abundance near the Fe(III)/Fe(II) redox boundary. Additional genera with microorganisms capable of coupling fermentation to Fe-reduction, includingClostridiumandBacillus, were observed. Also, the Fe-oxidizing families Mariprofundaceae and Gallionellaceae occurred at the SK and BB sites, respectively, supporting Fe-cycling. In contrast, the sulphate (SO4 (2-)) reducing bacteriaDesulfococcusandDesulfobacteriumwere more abundant at greater depths concurring with a decrease in Fe-reducing activity. The communities revealed by pyrosequencing, thus, match the redox stratification indicated by the geochemistry, with the known Fe-reducers coinciding with the zone of Fe-reduction. Not the intensely studied model organisms, such asGeobacterspp., but rather versatile microorganisms, including sulphate reducers and possibly unknown groups appear to be important for Fe-reduction in these marine suboxic sediments. © FEMS 2016. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

Entities:  

Keywords:  iron oxidation; iron reduction; marine microbial ecology; marine sediments; microbial communities; next-generation 16S rRNA gene amplicon sequencing

Mesh:

Substances:

Year:  2016        PMID: 26960392     DOI: 10.1093/femsec/fiw054

Source DB:  PubMed          Journal:  FEMS Microbiol Ecol        ISSN: 0168-6496            Impact factor:   4.194


  10 in total

1.  Microaerophilic Fe(II)-Oxidizing Zetaproteobacteria Isolated from Low-Fe Marine Coastal Sediments: Physiology and Composition of Their Twisted Stalks.

Authors:  K Laufer; M Nordhoff; M Halama; R E Martinez; M Obst; M Nowak; H Stryhanyuk; H H Richnow; A Kappler
Journal:  Appl Environ Microbiol       Date:  2017-03-31       Impact factor: 4.792

Review 2.  Iron-oxidizing bacteria in marine environments: recent progresses and future directions.

Authors:  Hiroko Makita
Journal:  World J Microbiol Biotechnol       Date:  2018-07-04       Impact factor: 3.312

3.  Iron and total organic carbon shape the spatial distribution pattern of sediment Fe(III) reducing bacteria in a volcanic lake, NE China.

Authors:  Yue Zhan; Mengran Yang; Yu Zhang; Jian Yang; Weidong Wang; Lei Yan; Shuang Zhang
Journal:  World J Microbiol Biotechnol       Date:  2021-08-16       Impact factor: 3.312

4.  Biological rejuvenation of iron oxides in bioturbated marine sediments.

Authors:  Jacob P Beam; Jarrod J Scott; Sean M McAllister; Clara S Chan; James McManus; Filip J R Meysman; David Emerson
Journal:  ISME J       Date:  2018-01-17       Impact factor: 10.302

5.  Benthic Bacterial Community Composition in the Oligohaline-Marine Transition of Surface Sediments in the Baltic Sea Based on rRNA Analysis.

Authors:  Julia Klier; Olaf Dellwig; Thomas Leipe; Klaus Jürgens; Daniel P R Herlemann
Journal:  Front Microbiol       Date:  2018-02-19       Impact factor: 5.640

6.  Nitrogen Metabolism Genes from Temperate Marine Sediments.

Authors:  Carolina Reyes; Dominik Schneider; Marko Lipka; Andrea Thürmer; Michael E Böttcher; Michael W Friedrich
Journal:  Mar Biotechnol (NY)       Date:  2017-03-10       Impact factor: 3.619

7.  Exploring the Potential of the Microbiome as a Marker of the Geographic Origin of Fresh Seafood.

Authors:  Xiaoji Liu; Januana S Teixeira; Saurabh Ner; Kassandra V Ma; Nicholas Petronella; Swapan Banerjee; Jennifer Ronholm
Journal:  Front Microbiol       Date:  2020-04-17       Impact factor: 5.640

8.  Microbial Fe(III) reduction as a potential iron source from Holocene sediments beneath Larsen Ice Shelf.

Authors:  Jaewoo Jung; Kyu-Cheul Yoo; Brad E Rosenheim; Tim M Conway; Jae Il Lee; Ho Il Yoon; Chung Yeon Hwang; Kiho Yang; Christina Subt; Jinwook Kim
Journal:  Nat Commun       Date:  2019-12-19       Impact factor: 14.919

9.  The hunt for the most-wanted chemolithoautotrophic spookmicrobes.

Authors:  Michiel H In 't Zandt; Anniek Ee de Jong; Caroline P Slomp; Mike Sm Jetten
Journal:  FEMS Microbiol Ecol       Date:  2018-06-01       Impact factor: 4.194

10.  Bacterial succession along a sediment porewater gradient at Lake Neusiedl in Austria.

Authors:  Avril Jean Elisabeth von Hoyningen-Huene; Dominik Schneider; Dario Fussmann; Andreas Reimer; Gernot Arp; Rolf Daniel
Journal:  Sci Data       Date:  2019-08-30       Impact factor: 6.444

  10 in total

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