| Literature DB >> 26960331 |
Asish Ghoshal1, Raghavendran Shankar1, Saurabh Bagchi1, Ananth Grama1, Somali Chaterji2.
Abstract
Entities:
Year: 2016 PMID: 26960331 PMCID: PMC4784320 DOI: 10.1186/s12864-016-2367-1
Source DB: PubMed Journal: BMC Genomics ISSN: 1471-2164 Impact factor: 3.969
Fig. 6Scatter plot of frequencies of various types of seed alignment patterns in set of positive miRNA-mRNA interactions for Mouse (x-axis) and Human (y-axis). Among the top-10 most frequently occurring patterns, only two, namely, the 6-mer and 7-mer, are canonical seed match patterns. In the labels for the top-10 most frequently occurring patterns, 1 indicates a match, 2 indicates a mismatch, 3 a gap, and 4 indicates a GU wobble
Fig. 7ROC curves for 10-fold cross-validation performance of Avishkar in different regions of the gene in the human dataset