Literature DB >> 26958171

Mining and Visualizing Family History Associations in the Electronic Health Record: A Case Study for Pediatric Asthma.

Elizabeth S Chen1, Genevieve B Melton2, Richard C Wasserman3, Paul T Rosenau3, Diantha B Howard4, Indra Neil Sarkar1.   

Abstract

Asthma is the most common chronic childhood disease and has seen increasing prevalence worldwide. While there is existing evidence of familial and other risk factors for pediatric asthma, there is a need for further studies to explore and understand interactions among these risk factors. The goal of this study was to develop an approach for mining, visualizing, and evaluating association rules representing pairwise interactions among potential familial risk factors based on information documented as part of a patient's family history in the electronic health record. As a case study, 10,260 structured family history entries for a cohort of 1,531 pediatric asthma patients were extracted and analyzed to generate family history associations at different levels of granularity. The preliminary results highlight the potential of this approach for validating known knowledge and suggesting opportunities for further investigation that may contribute to improving prediction of asthma risk in children.

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Year:  2015        PMID: 26958171      PMCID: PMC4765567     

Source DB:  PubMed          Journal:  AMIA Annu Symp Proc        ISSN: 1559-4076


  43 in total

1.  Familial risk of asthma among adolescents and their relatives in Taiwan.

Authors:  T N Wang; Y Y Chao; T H Wang; C J Chen; Y C Ko
Journal:  J Asthma       Date:  2001-09       Impact factor: 2.515

Review 2.  The asthma epidemic.

Authors:  Waltraud Eder; Markus J Ege; Erika von Mutius
Journal:  N Engl J Med       Date:  2006-11-23       Impact factor: 91.245

3.  Using a natural language processing system to extract and code family history data from admission reports.

Authors:  Jeff Friedlin; Clement J McDonald
Journal:  AMIA Annu Symp Proc       Date:  2006

Review 4.  Pediatric asthma.

Authors:  Lora J Stewart
Journal:  Prim Care       Date:  2008-03       Impact factor: 2.907

5.  Parental history of migraine and bronchial asthma in children.

Authors:  F Gürkan; A Ece; K Haspolat; B Dikici
Journal:  Allergol Immunopathol (Madr)       Date:  2000 Jan-Feb       Impact factor: 1.667

6.  Genetics and environmental risk factors associated with asthma in schoolchildren.

Authors:  Abdulbari Bener; Ibrahim A Janahi; Alfred Sabbah
Journal:  Eur Ann Allergy Clin Immunol       Date:  2005-05

7.  Association between migraine and asthma: matched case-control study.

Authors:  Gail Davey; Philip Sedgwick; Will Maier; George Visick; David P Strachan; H Ross Anderson
Journal:  Br J Gen Pract       Date:  2002-09       Impact factor: 5.386

8.  Genetic risk for asthma, allergic rhinitis, and atopic dermatitis.

Authors:  S Dold; M Wjst; E von Mutius; P Reitmeir; E Stiepel
Journal:  Arch Dis Child       Date:  1992-08       Impact factor: 3.791

9.  Automated acquisition of disease drug knowledge from biomedical and clinical documents: an initial study.

Authors:  Elizabeth S Chen; George Hripcsak; Hua Xu; Marianthi Markatou; Carol Friedman
Journal:  J Am Med Inform Assoc       Date:  2007-10-18       Impact factor: 4.497

Review 10.  Diagnosis and treatment of asthma in childhood: a PRACTALL consensus report.

Authors:  L B Bacharier; A Boner; K-H Carlsen; P A Eigenmann; T Frischer; M Götz; P J Helms; J Hunt; A Liu; N Papadopoulos; T Platts-Mills; P Pohunek; F E R Simons; E Valovirta; U Wahn; J Wildhaber
Journal:  Allergy       Date:  2008-01       Impact factor: 13.146

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  4 in total

1.  Comparative effects of Curcuma longa and curcumin on paraquat-induced systemic and lung oxidative stress and inflammation in rats.

Authors:  Seyedeh Zahra Ghasemi; Arghavan Memarzia; Sepideh Behrouz; Zahra Gholamnezhad; Mohammad Hossein Boskabady
Journal:  Avicenna J Phytomed       Date:  2022 Jul-Aug

2.  Identifying Family History and Substance Use Associations for Adult Epilepsy from the Electronic Health Record.

Authors:  Yan Wang; Elizabeth S Chen; Ilo Leppik; Serguei Pakhomov; Indra Neil Sarkar; Genevieve B Melton
Journal:  AMIA Jt Summits Transl Sci Proc       Date:  2016-07-20

3.  Identifying Psychiatric Comorbidities for Obstructive Sleep Apnea in the Biomedical Literature and Electronic Health Record.

Authors:  Jessica M Haddad; Elizabeth S Chen
Journal:  AMIA Jt Summits Transl Sci Proc       Date:  2017-07-26

4.  Systematic Analysis of Free-Text Family History in Electronic Health Record.

Authors:  Yanshan Wang; Liwei Wang; Majid Rastegar-Mojarad; Sijia Liu; Feichen Shen; Hongfang Liu
Journal:  AMIA Jt Summits Transl Sci Proc       Date:  2017-07-26
  4 in total

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