Literature DB >> 26956848

Bioinformatic and Expression Analysis of Ventricular Septal Defect-associated Long Non-coding RNA TUC40-.

Hui-juan Li1, Li Jiang1, Zhang-bin Yu2, Shu-ping Han2, Xue-hua Liu2.   

Abstract

OBJECTIVE: To explore the potential role of TUC40- in human and mouse embryonic heart development.
METHODS: Bioinformatics databases including NCBI,UCSC,and Uniprot and software including Clustal,DNAMAN,and MEGA 6 were used to collect information of TUC40- and uc.40-. The expression profile at key time points of heart development was investigated by strand-specific quantitative real time polymerase chain reaction.
RESULTS: Uc.40- was conservative in sequence, genomic location, and transcription factor binding sites across human and mouse. Pbx1/TUC40- showed negative trend during embryonic mouse heart maturation.
CONCLUSIONS: Various levels of conservation of uc.40- suggests similar functions of TUC40- in these two species. TUC40- may play its roles in human and mouse embryonic heart development by regulating Pbx1.

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Year:  2016        PMID: 26956848     DOI: 10.3881/j.issn.1000-503X.2016.01.001

Source DB:  PubMed          Journal:  Zhongguo Yi Xue Ke Xue Yuan Xue Bao        ISSN: 1000-503X


  1 in total

1.  LncRNA-uc.40 silence promotes P19 embryonic cells differentiation to cardiomyocyte via the PBX1 gene.

Authors:  Rongqiang Wu; Peng Xue; Yu Wan; Shizhong Wang; Meng Gu
Journal:  In Vitro Cell Dev Biol Anim       Date:  2018-08-15       Impact factor: 2.416

  1 in total

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