| Literature DB >> 26956495 |
Annika Neethling1, Jomien Mouton1, Ben Loos2, Valerie Corfield1, Carin de Villiers1, Craig Kinnear1.
Abstract
AIM: KCNE2 encodes for the potassium voltage-gated channel, KCNE2. Mutations in KCNE2 have been associated with long-QT syndrome (LQTS). While KCNE2 has been extensively studied, the functions of its C-terminal domain remain inadequately described. Here, we aimed to elucidate the functions of this domain by identifying its protein interactors using yeast two-hybrid analysis.Entities:
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Year: 2016 PMID: 26956495 PMCID: PMC4816932 DOI: 10.5830/CVJA-2015-049
Source DB: PubMed Journal: Cardiovasc J Afr ISSN: 1015-9657 Impact factor: 1.167
Nucleotide sequences of primers used to amplify the C-terminal of KCNE2
| KCNE2-forwardNde1 | 5’ - ACTGCAGAACATATGCTCAAATCCAAGAGACGG - 3’ | 50 |
| KCNE2-reverseEcoR1 | 5’ - ACTGCAGAAGAATTCCTATCAGGGGAACATTTTGAAC - 3’ | 51 |
°C: degrees Celsius; Ta: annealing temperature; KCNE2: potassium voltagegated ion-channel subfamily E member 2. The bold text represents a tag, which facilitates restriction enzyme digestion, while the underlined sequences correspond to the Nde1 and EcoR1 restriction enzyme sites, respectively. The short italic sequence (CTA) symbolises the stop codon, and the remaining text represents the sequence of the primer, which will anneal to the DNA in the PCR amplification reaction.
S cerevisiae bait strains
| AH109 pGBKT7-KCNE2 | Positive control plasmid |
| AH109 pGBKT7 | Non-recombinant plasmid |
| AH109 pGBKT-53* | Control bait plasmid |
| AH109 pGBKT7-WFS1 | Negative control plasmid |
*The pGBKT7 vector containing the human p53 gene. KCNE2: potassium voltage-gated ion-channel subfamily E member 2; WFS1: Wolfram syndrome 1.
Fig. 1.Fluorescent imaging and co-localisation analysis of KCNE2 and FLNC in differentiated H9C2 cardiomyocytes under normoxic and hypoxic conditions. (a–h) Co-localisation under normoxic conditions. (i–p) Co-localisation under hypoxic conditions. (a, e, i, m) KCNE2 labelled with the rabbit polyclonal anti-KCNE2 primary antibody and a donkey anti-rabbit Alexa 488 secondary antibody (green). (b, f, j, n) FLNC labelled with the goat polyclonal anti-Filamin C primary antibody and donkey anti-goat Cy3 secondary antibody (red). (c, g, k, o) Overlay images of a–b, e–f, i–j and m–n, respectively with Hoechst H-33342 nuclear staining (blue). (d, h, l, p) Co-localisation of KCNE2 and FLNC generated from merged images (white). Arrows in d and h indicate the ordered filamentous structure in the cardiomyocytes under normoxic conditions (blue). Arrows in l and p indicate the disordered filamentous structure in the cardiomyocytes under hypoxic conditions (blue). Micrographs are shown as maximum-intensity projections based on z-stack image frames. Co-loc: co-localisation; FLNC: filamin C; KCNE2: potassium voltage-gated ion-channel subfamily E member 2. Scale bar 10 μm.
Fig. 2.Western blots of Co-IP of KCNE2 and putative interactor FLNC in differentiated H9C2 cardiomyocytes. Reciprocal Co-IP reactions were performed for each interaction. (a–b) Co-IP under normoxic conditions. (c–d) Co-IP under hypoxic conditions. FLNC: filamin C; IP: immunoprecipitate; KCNE2: potassium voltage-gated ion-channel subfamily E member 2; kDa: kilo Dalton; Neg: negative control; Prot G: protein G agarose control; WB: Western blot. Note: The Western blot revealed a larger-than-expected predicted molecular weight band for KCNE2 (50 kD versus 14–20 kDa) (c). This is likely due to previously described protein modifications and/or protein interactions of KCNE2.19,77-80