Literature DB >> 26952566

Transcript Abundance Explains mRNA Mobility Data in Arabidopsis thaliana.

Alexander Calderwood1, Stanislav Kopriva2, Richard J Morris3.   

Abstract

Recently, a large population of mRNA was shown to be able to travel between plant organs via sieve elements as a putative long-distance signaling molecule. However, a mechanistic basis by which transcripts are selected for transport has not yet been identified. Here, we show that experimental mRNA mobility data in Arabidopsis can be explained by transcript abundance and half-life. This suggests that the majority of identified mobile transcripts can be accounted for by non-sequence-specific movement of mRNA from companion cells into sieve elements.
© 2016 American Society of Plant Biologists. All rights reserved.

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Year:  2016        PMID: 26952566      PMCID: PMC4826013          DOI: 10.1105/tpc.15.00956

Source DB:  PubMed          Journal:  Plant Cell        ISSN: 1040-4651            Impact factor:   11.277


  23 in total

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Authors:  M Kim; W Canio; S Kessler; N Sinha
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Authors:  Dahlene Fusco; Nathalie Accornero; Brigitte Lavoie; Shailesh M Shenoy; Jean-Marie Blanchard; Robert H Singer; Edouard Bertrand
Journal:  Curr Biol       Date:  2003-01-21       Impact factor: 10.834

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Authors:  Valerie Haywood; Tien-Shin Yu; Nien-Chen Huang; William J Lucas
Journal:  Plant J       Date:  2005-04       Impact factor: 6.417

Review 4.  Integrative plant biology: role of phloem long-distance macromolecular trafficking.

Authors:  Tony J Lough; William J Lucas
Journal:  Annu Rev Plant Biol       Date:  2006       Impact factor: 26.379

Review 5.  Long distance transport and movement of RNA through the phloem.

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Journal:  J Exp Bot       Date:  2007-09-27       Impact factor: 6.992

6.  Dynamics of a mobile RNA of potato involved in a long-distance signaling pathway.

Authors:  Anjan K Banerjee; Mithu Chatterjee; Yueyue Yu; Sang-Gon Suh; W Allen Miller; David J Hannapel
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7.  Untranslated regions of a mobile transcript mediate RNA metabolism.

Authors:  Anjan K Banerjee; Tian Lin; David J Hannapel
Journal:  Plant Physiol       Date:  2009-09-25       Impact factor: 8.340

8.  Genome-wide analysis of mRNA decay rates and their determinants in Arabidopsis thaliana.

Authors:  Reena Narsai; Katharine A Howell; A Harvey Millar; Nicholas O'Toole; Ian Small; James Whelan
Journal:  Plant Cell       Date:  2007-11-16       Impact factor: 11.277

9.  Profiling translatomes of discrete cell populations resolves altered cellular priorities during hypoxia in Arabidopsis.

Authors:  Angelika Mustroph; M Eugenia Zanetti; Charles J H Jang; Hans E Holtan; Peter P Repetti; David W Galbraith; Thomas Girke; Julia Bailey-Serres
Journal:  Proc Natl Acad Sci U S A       Date:  2009-10-20       Impact factor: 11.205

10.  DREME: motif discovery in transcription factor ChIP-seq data.

Authors:  Timothy L Bailey
Journal:  Bioinformatics       Date:  2011-05-04       Impact factor: 6.937

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  33 in total

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Review 2.  RNA mobility in parasitic plant - host interactions.

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Authors:  Jennifer Mach
Journal:  Plant Cell       Date:  2016-06-17       Impact factor: 11.277

4.  tRNA-Related Sequences Trigger Systemic mRNA Transport in Plants.

Authors:  Wenna Zhang; Christoph J Thieme; Gregor Kollwig; Federico Apelt; Lei Yang; Nikola Winter; Nadine Andresen; Dirk Walther; Friedrich Kragler
Journal:  Plant Cell       Date:  2016-06-07       Impact factor: 11.277

5.  Should I Stay or Should I Go? Abundance as a New Null Hypothesis for Determination of mRNA Mobility.

Authors:  Nancy R Hofmann
Journal:  Plant Cell       Date:  2016-03-07       Impact factor: 11.277

6.  Swept Away: Protein Mobility in the Phloem.

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7.  Selective Targeting of Mobile mRNAs to Plasmodesmata for Cell-to-Cell Movement.

Authors:  Kai-Ren Luo; Nien-Chen Huang; Tien-Shin Yu
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8.  Mobility of Antiflorigen and PEBP mRNAs in Tomato-Tobacco Heterografts.

Authors:  Nien-Chen Huang; Kai-Ren Luo; Tien-Shin Yu
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9.  Elucidation of the Mechanisms of Long-Distance mRNA Movement in a Nicotiana benthamiana/Tomato Heterograft System.

Authors:  Chao Xia; Yi Zheng; Jing Huang; Xiangjun Zhou; Rui Li; Manrong Zha; Shujuan Wang; Zhiqiang Huang; Hai Lan; Robert Turgeon; Zhangjun Fei; Cankui Zhang
Journal:  Plant Physiol       Date:  2018-05-02       Impact factor: 8.340

10.  Lost in Transit: Long-Distance Trafficking and Phloem Unloading of Protein Signals in Arabidopsis Homografts.

Authors:  Danae Simone Genevieve Paultre; Marie-Paule Gustin; Attila Molnar; Karl J Oparka
Journal:  Plant Cell       Date:  2016-09-06       Impact factor: 11.277

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