Literature DB >> 26949748

Functional Effects of Schizophrenia-Linked Genetic Variants on Intrinsic Single-Neuron Excitability: A Modeling Study.

Tuomo Mäki-Marttunen1, Geir Halnes1, Anna Devor1, Aree Witoelar1, Francesco Bettella1, Srdjan Djurovic1, Yunpeng Wang1, Gaute T Einevoll1, Ole A Andreassen1, Anders M Dale1.   

Abstract

BACKGROUND: Recent genome-wide association studies have identified a large number of genetic risk factors for schizophrenia (SCZ) featuring ion channels and calcium transporters. For some of these risk factors, independent prior investigations have examined the effects of genetic alterations on the cellular electrical excitability and calcium homeostasis. In the present proof-of-concept study, we harnessed these experimental results for modeling of computational properties on layer V cortical pyramidal cells and identified possible common alterations in behavior across SCZ-related genes.
METHODS: We applied a biophysically detailed multicompartmental model to study the excitability of a layer V pyramidal cell. We reviewed the literature on functional genomics for variants of genes associated with SCZ and used changes in neuron model parameters to represent the effects of these variants.
RESULTS: We present and apply a framework for examining the effects of subtle single nucleotide polymorphisms in ion channel and calcium transporter-encoding genes on neuron excitability. Our analysis indicates that most of the considered SCZ-related genetic variants affect the spiking behavior and intracellular calcium dynamics resulting from summation of inputs across the dendritic tree.
CONCLUSIONS: Our results suggest that alteration in the ability of a single neuron to integrate the inputs and scale its excitability may constitute a fundamental mechanistic contributor to mental disease, alongside the previously proposed deficits in synaptic communication and network behavior.

Entities:  

Keywords:  Biophysical modeling; Functional genomics; Genome-wide association studies; Layer V pyramidal cell; Neuron excitability; Schizophrenia

Year:  2016        PMID: 26949748      PMCID: PMC4776655          DOI: 10.1016/j.bpsc.2015.09.002

Source DB:  PubMed          Journal:  Biol Psychiatry Cogn Neurosci Neuroimaging        ISSN: 2451-9022


  60 in total

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Journal:  J Neurosci Methods       Date:  2012-04-13       Impact factor: 2.390

Review 2.  Neurophysiological endophenotypes of schizophrenia: the viability of selected candidate measures.

Authors:  Bruce I Turetsky; Monica E Calkins; Gregory A Light; Ann Olincy; Allen D Radant; Neal R Swerdlow
Journal:  Schizophr Bull       Date:  2006-11-29       Impact factor: 9.306

3.  Functional characterization of alternative splicing in the C terminus of L-type CaV1.3 channels.

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Journal:  J Biol Chem       Date:  2011-10-13       Impact factor: 5.157

4.  The novel p.L1649Q mutation in the SCN1A epilepsy gene is associated with familial hemiplegic migraine: genetic and functional studies. Mutation in brief #957. Online.

Authors:  Kaate R J Vanmolkot; Elena Babini; Boukje de Vries; Anine H Stam; Tobias Freilinger; Gisela M Terwindt; Lisa Norris; Joost Haan; Rune R Frants; Nabih M Ramadan; Michel D Ferrari; Michael Pusch; Arn M J M van den Maagdenberg; Martin Dichgans
Journal:  Hum Mutat       Date:  2007-05       Impact factor: 4.878

5.  Large-scale genome-wide association analysis of bipolar disorder identifies a new susceptibility locus near ODZ4.

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Journal:  Nat Genet       Date:  2011-09-18       Impact factor: 38.330

6.  Genome-wide association study identifies five new schizophrenia loci.

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Journal:  Nat Genet       Date:  2011-09-18       Impact factor: 38.330

7.  Computational psychiatry: a Rosetta Stone linking the brain to mental illness.

Authors:  Philip R Corlett; Paul C Fletcher
Journal:  Lancet Psychiatry       Date:  2014-08-12       Impact factor: 27.083

8.  Functional properties of a newly identified C-terminal splice variant of Cav1.3 L-type Ca2+ channels.

Authors:  Gabriella Bock; Mathias Gebhart; Anja Scharinger; Wanchana Jangsangthong; Perrine Busquet; Chiara Poggiani; Simone Sartori; Matteo E Mangoni; Martina J Sinnegger-Brauns; Stefan Herzig; Jörg Striessnig; Alexandra Koschak
Journal:  J Biol Chem       Date:  2011-10-13       Impact factor: 5.157

9.  Genome-wide association analysis identifies 13 new risk loci for schizophrenia.

Authors:  Stephan Ripke; Colm O'Dushlaine; Kimberly Chambert; Jennifer L Moran; Anna K Kähler; Susanne Akterin; Sarah E Bergen; Ann L Collins; James J Crowley; Menachem Fromer; Yunjung Kim; Sang Hong Lee; Patrik K E Magnusson; Nick Sanchez; Eli A Stahl; Stephanie Williams; Naomi R Wray; Kai Xia; Francesco Bettella; Anders D Borglum; Brendan K Bulik-Sullivan; Paul Cormican; Nick Craddock; Christiaan de Leeuw; Naser Durmishi; Michael Gill; Vera Golimbet; Marian L Hamshere; Peter Holmans; David M Hougaard; Kenneth S Kendler; Kuang Lin; Derek W Morris; Ole Mors; Preben B Mortensen; Benjamin M Neale; Francis A O'Neill; Michael J Owen; Milica Pejovic Milovancevic; Danielle Posthuma; John Powell; Alexander L Richards; Brien P Riley; Douglas Ruderfer; Dan Rujescu; Engilbert Sigurdsson; Teimuraz Silagadze; August B Smit; Hreinn Stefansson; Stacy Steinberg; Jaana Suvisaari; Sarah Tosato; Matthijs Verhage; James T Walters; Douglas F Levinson; Pablo V Gejman; Kenneth S Kendler; Claudine Laurent; Bryan J Mowry; Michael C O'Donovan; Michael J Owen; Ann E Pulver; Brien P Riley; Sibylle G Schwab; Dieter B Wildenauer; Frank Dudbridge; Peter Holmans; Jianxin Shi; Margot Albus; Madeline Alexander; Dominique Campion; David Cohen; Dimitris Dikeos; Jubao Duan; Peter Eichhammer; Stephanie Godard; Mark Hansen; F Bernard Lerer; Kung-Yee Liang; Wolfgang Maier; Jacques Mallet; Deborah A Nertney; Gerald Nestadt; Nadine Norton; Francis A O'Neill; George N Papadimitriou; Robert Ribble; Alan R Sanders; Jeremy M Silverman; Dermot Walsh; Nigel M Williams; Brandon Wormley; Maria J Arranz; Steven Bakker; Stephan Bender; Elvira Bramon; David Collier; Benedicto Crespo-Facorro; Jeremy Hall; Conrad Iyegbe; Assen Jablensky; Rene S Kahn; Luba Kalaydjieva; Stephen Lawrie; Cathryn M Lewis; Kuang Lin; Don H Linszen; Ignacio Mata; Andrew McIntosh; Robin M Murray; Roel A Ophoff; John Powell; Dan Rujescu; Jim Van Os; Muriel Walshe; Matthias Weisbrod; Durk Wiersma; Peter Donnelly; Ines Barroso; Jenefer M Blackwell; Elvira Bramon; Matthew A Brown; Juan P Casas; Aiden P Corvin; Panos Deloukas; Audrey Duncanson; Janusz Jankowski; Hugh S Markus; Christopher G Mathew; Colin N A Palmer; Robert Plomin; Anna Rautanen; Stephen J Sawcer; Richard C Trembath; Ananth C Viswanathan; Nicholas W Wood; Chris C A Spencer; Gavin Band; Céline Bellenguez; Colin Freeman; Garrett Hellenthal; Eleni Giannoulatou; Matti Pirinen; Richard D Pearson; Amy Strange; Zhan Su; Damjan Vukcevic; Peter Donnelly; Cordelia Langford; Sarah E Hunt; Sarah Edkins; Rhian Gwilliam; Hannah Blackburn; Suzannah J Bumpstead; Serge Dronov; Matthew Gillman; Emma Gray; Naomi Hammond; Alagurevathi Jayakumar; Owen T McCann; Jennifer Liddle; Simon C Potter; Radhi Ravindrarajah; Michelle Ricketts; Avazeh Tashakkori-Ghanbaria; Matthew J Waller; Paul Weston; Sara Widaa; Pamela Whittaker; Ines Barroso; Panos Deloukas; Christopher G Mathew; Jenefer M Blackwell; Matthew A Brown; Aiden P Corvin; Mark I McCarthy; Chris C A Spencer; Elvira Bramon; Aiden P Corvin; Michael C O'Donovan; Kari Stefansson; Edward Scolnick; Shaun Purcell; Steven A McCarroll; Pamela Sklar; Christina M Hultman; Patrick F Sullivan
Journal:  Nat Genet       Date:  2013-08-25       Impact factor: 38.330

10.  Biological insights from 108 schizophrenia-associated genetic loci.

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Journal:  Nature       Date:  2014-07-22       Impact factor: 49.962

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  12 in total

Review 1.  Genetic evidence for role of integration of fast and slow neurotransmission in schizophrenia.

Authors:  A Devor; O A Andreassen; Y Wang; T Mäki-Marttunen; O B Smeland; C-C Fan; A J Schork; D Holland; W K Thompson; A Witoelar; C-H Chen; R S Desikan; L K McEvoy; S Djurovic; P Greengard; P Svenningsson; G T Einevoll; A M Dale
Journal:  Mol Psychiatry       Date:  2017-03-28       Impact factor: 15.992

2.  Excitatory and inhibitory effects of HCN channel modulation on excitability of layer V pyramidal cells.

Authors:  Tuomo Mäki-Marttunen; Verónica Mäki-Marttunen
Journal:  PLoS Comput Biol       Date:  2022-09-13       Impact factor: 4.779

3.  The effect of alterations of schizophrenia-associated genes on gamma band oscillations.

Authors:  Christoph Metzner; Tuomo Mäki-Marttunen; Gili Karni; Hana McMahon-Cole; Volker Steuber
Journal:  Schizophrenia (Heidelb)       Date:  2022-04-28

Review 4.  Genetic tests in major psychiatric disorders-integrating molecular medicine with clinical psychiatry-why is it so difficult?

Authors:  U Demkow; T Wolańczyk
Journal:  Transl Psychiatry       Date:  2017-06-13       Impact factor: 6.222

5.  Pleiotropic effects of schizophrenia-associated genetic variants in neuron firing and cardiac pacemaking revealed by computational modeling.

Authors:  Tuomo Mäki-Marttunen; Glenn T Lines; Andrew G Edwards; Aslak Tveito; Anders M Dale; Gaute T Einevoll; Ole A Andreassen
Journal:  Transl Psychiatry       Date:  2017-11-17       Impact factor: 6.222

6.  Sex Differences in Biophysical Signatures across Molecularly Defined Medial Amygdala Neuronal Subpopulations.

Authors:  Heidi Y Matos; David Hernandez-Pineda; Claire M Charpentier; Allison Rusk; Joshua G Corbin; Kevin S Jones
Journal:  eNeuro       Date:  2020-07-02

7.  Computational Modeling of Genetic Contributions to Excitability and Neural Coding in Layer V Pyramidal Cells: Applications to Schizophrenia Pathology.

Authors:  Tuomo Mäki-Marttunen; Anna Devor; William A Phillips; Anders M Dale; Ole A Andreassen; Gaute T Einevoll
Journal:  Front Comput Neurosci       Date:  2019-09-26       Impact factor: 2.380

8.  Alterations in Schizophrenia-Associated Genes Can Lead to Increased Power in Delta Oscillations.

Authors:  Tuomo Mäki-Marttunen; Florian Krull; Francesco Bettella; Espen Hagen; Solveig Næss; Torbjørn V Ness; Torgeir Moberget; Torbjørn Elvsåshagen; Christoph Metzner; Anna Devor; Andrew G Edwards; Marianne Fyhn; Srdjan Djurovic; Anders M Dale; Ole A Andreassen; Gaute T Einevoll
Journal:  Cereb Cortex       Date:  2019-02-01       Impact factor: 5.357

9.  Multifactorial Modeling of Impairment of Evoked Gamma Range Oscillations in Schizophrenia.

Authors:  Christoph Metzner; Achim Schweikard; Bartosz Zurowski
Journal:  Front Comput Neurosci       Date:  2016-08-26       Impact factor: 2.380

10.  A stepwise neuron model fitting procedure designed for recordings with high spatial resolution: Application to layer 5 pyramidal cells.

Authors:  Tuomo Mäki-Marttunen; Geir Halnes; Anna Devor; Christoph Metzner; Anders M Dale; Ole A Andreassen; Gaute T Einevoll
Journal:  J Neurosci Methods       Date:  2017-10-07       Impact factor: 2.390

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