Literature DB >> 26946968

Genetic diversity and phylogenetic analysis of two Tunisian bivalves (Mactridae) Mactra corallina (Linnaeus, 1758) and Eastonia rugosa (Helbling, 1799) based on COI gene sequences.

Imene Chetoui1, Françoise Denis2, Mohamed Boussaid3, Khoula Telahigue4, M'Hamed El Cafsi4.   

Abstract

A partial sequence of mitochondrial cytochrome c oxidase subunit I (COI) was used as a genetic marker for a genetic diversity and phylogenetic analysis (DNA barcoding) of two Mactridae species, Mactra corallina and Eastonia rugosa, collected from the Tunisian coast. These Mactridae species could be distinguished by DNA barcoding techniques and they will be considered as monophyletic clades with the Neighbor-Joining (NJ) tree. The genetic structure detected that E. rugosa presents three haplotypes with a high frequency of HER1 (0.89). However, M. corralina shared 14 haplotypes. The haplotypic diversity (H) was equal to 0.205 and 0.954, respectively, for E. rugosa and M. corallina. While the nucleotide diversity (π) was higher for M. corallina (π=0.0818), the mismatch distribution showed a unimodal curve for E. rugosa (a recent sudden demographic expansion) and a multimodal distribution for M. corallina (size stability).
Copyright © 2016 Académie des sciences. Published by Elsevier SAS. All rights reserved.

Entities:  

Keywords:  Analyse phylogénétique; COI gene; Diversité génétique; Eastonia rugosa; Genetic diversity; Gène COI; Mactra corallina; Phylogenetic analysis

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Year:  2016        PMID: 26946968     DOI: 10.1016/j.crvi.2016.02.001

Source DB:  PubMed          Journal:  C R Biol        ISSN: 1631-0691            Impact factor:   1.583


  1 in total

1.  Molecular Cytogenetics in Trough Shells (Mactridae, Bivalvia): Divergent GC-Rich Heterochromatin Content.

Authors:  Daniel García-Souto; Concepción Pérez-García; Jack Kendall; Juan J Pasantes
Journal:  Genes (Basel)       Date:  2016-08-16       Impact factor: 4.096

  1 in total

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