Literature DB >> 26945625

Structure and function of the AAA+ ATPase p97/Cdc48p.

Di Xia1, Wai Kwan Tang2, Yihong Ye3.   

Abstract

p97 (also known as valosin-containing protein (VCP) in mammals or Cdc48p in Saccharomyces cerevisiae) is an evolutionarily conserved ATPase present in all eukaryotes and archaebacteria. In conjunction with a collection of cofactors and adaptors, p97/Cdc48p performs an array of biological functions mostly through modulating the stability of 'client' proteins. Using energy from ATP hydrolysis, p97/Cdc48p segregates these molecules from immobile cellular structures such as protein assemblies, membrane organelles, and chromatin. Consequently, the released polypeptides can be efficiently degraded by the ubiquitin proteasome system or recycled. This review summarizes our current understanding of the structure and function of this essential cellular chaperoning system. Published by Elsevier B.V.

Entities:  

Keywords:  AAA+ ATPase; Chromatin-associated degradation; ER-associated degradation; Membrane fusion; Mitochondria-associated degradation; Proteasome; Protein quality control; Ribosome-associated degradation; Segregase; Ubiquitin; Unfoldase; p97/CDC48

Mesh:

Substances:

Year:  2016        PMID: 26945625      PMCID: PMC4821690          DOI: 10.1016/j.gene.2016.02.042

Source DB:  PubMed          Journal:  Gene        ISSN: 0378-1119            Impact factor:   3.688


  153 in total

1.  Unfolding and internalization of proteins by the ATP-dependent proteases ClpXP and ClpAP.

Authors:  S K Singh; R Grimaud; J R Hoskins; S Wickner; M R Maurizi
Journal:  Proc Natl Acad Sci U S A       Date:  2000-08-01       Impact factor: 11.205

Review 2.  AAA+ superfamily ATPases: common structure--diverse function.

Authors:  T Ogura; A J Wilkinson
Journal:  Genes Cells       Date:  2001-07       Impact factor: 1.891

3.  A major conformational change in p97 AAA ATPase upon ATP binding.

Authors:  I Rouiller; V M Butel; M Latterich; R A Milligan; E M Wilson-Kubalek
Journal:  Mol Cell       Date:  2000-12       Impact factor: 17.970

4.  Structure of the AAA ATPase p97.

Authors:  X Zhang; A Shaw; P A Bates; R H Newman; B Gowen; E Orlova; M A Gorman; H Kondo; P Dokurno; J Lally; G Leonard; H Meyer; M van Heel; P S Freemont
Journal:  Mol Cell       Date:  2000-12       Impact factor: 17.970

5.  The conserved npl4 protein complex mediates proteasome-dependent membrane-bound transcription factor activation.

Authors:  A L Hitchcock; H Krebber; S Frietze; A Lin; M Latterich; P A Silver
Journal:  Mol Biol Cell       Date:  2001-10       Impact factor: 4.138

6.  A complex of mammalian ufd1 and npl4 links the AAA-ATPase, p97, to ubiquitin and nuclear transport pathways.

Authors:  H H Meyer; J G Shorter; J Seemann; D Pappin; G Warren
Journal:  EMBO J       Date:  2000-05-15       Impact factor: 11.598

7.  Clinical and molecular studies in a unique family with autosomal dominant limb-girdle muscular dystrophy and Paget disease of bone.

Authors:  V E Kimonis; M J Kovach; B Waggoner; S Leal; A Salam; L Rimer; K Davis; R Khardori; D Gelber
Journal:  Genet Med       Date:  2000 Jul-Aug       Impact factor: 8.822

8.  A ribosome-bound quality control complex triggers degradation of nascent peptides and signals translation stress.

Authors:  Onn Brandman; Jacob Stewart-Ornstein; Daisy Wong; Adam Larson; Christopher C Williams; Gene-Wei Li; Sharleen Zhou; David King; Peter S Shen; Jimena Weibezahn; Joshua G Dunn; Silvi Rouskin; Toshifumi Inada; Adam Frost; Jonathan S Weissman
Journal:  Cell       Date:  2012-11-21       Impact factor: 41.582

9.  Structure-activity relationship study reveals ML240 and ML241 as potent and selective inhibitors of p97 ATPase.

Authors:  Tsui-Fen Chou; Kelin Li; Kevin J Frankowski; Frank J Schoenen; Raymond J Deshaies
Journal:  ChemMedChem       Date:  2013-01-11       Impact factor: 3.466

10.  Cdc48/p97 promotes degradation of aberrant nascent polypeptides bound to the ribosome.

Authors:  Rati Verma; Robert S Oania; Natalie J Kolawa; Raymond J Deshaies
Journal:  Elife       Date:  2013-01-22       Impact factor: 8.140

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  74 in total

1.  UBE2O remodels the proteome during terminal erythroid differentiation.

Authors:  Anthony T Nguyen; Miguel A Prado; Paul J Schmidt; Anoop K Sendamarai; Joshua T Wilson-Grady; Mingwei Min; Dean R Campagna; Geng Tian; Yuan Shi; Verena Dederer; Mona Kawan; Nathalie Kuehnle; Joao A Paulo; Yu Yao; Mitchell J Weiss; Monica J Justice; Steven P Gygi; Mark D Fleming; Daniel Finley
Journal:  Science       Date:  2017-08-04       Impact factor: 47.728

2.  Cdc48/VCP and Endocytosis Regulate TDP-43 and FUS Toxicity and Turnover.

Authors:  Guangbo Liu; Aaron Byrd; Amanda N Warner; Fen Pei; Eman Basha; Allison Buchanan; J Ross Buchan
Journal:  Mol Cell Biol       Date:  2020-01-30       Impact factor: 4.272

Review 3.  Substrate selection by the proteasome through initiation regions.

Authors:  Takuya Tomita; Andreas Matouschek
Journal:  Protein Sci       Date:  2019-05-23       Impact factor: 6.725

4.  A Cdc48 "Retrochaperone" Function Is Required for the Solubility of Retrotranslocated, Integral Membrane Endoplasmic Reticulum-associated Degradation (ERAD-M) Substrates.

Authors:  Sonya Neal; Raymond Mak; Eric J Bennett; Randolph Hampton
Journal:  J Biol Chem       Date:  2017-01-11       Impact factor: 5.157

5.  p97 Negatively Regulates NRF2 by Extracting Ubiquitylated NRF2 from the KEAP1-CUL3 E3 Complex.

Authors:  Shasha Tao; Pengfei Liu; Gang Luo; Montserrat Rojo de la Vega; Heping Chen; Tongde Wu; Joseph Tillotson; Eli Chapman; Donna D Zhang
Journal:  Mol Cell Biol       Date:  2017-03-31       Impact factor: 4.272

Review 6.  Endoplasmic reticulum-resident selenoproteins as regulators of calcium signaling and homeostasis.

Authors:  Matthew W Pitts; Peter R Hoffmann
Journal:  Cell Calcium       Date:  2017-05-04       Impact factor: 6.817

Review 7.  Assessing heterogeneity in oligomeric AAA+ machines.

Authors:  Tatyana A Sysoeva
Journal:  Cell Mol Life Sci       Date:  2016-09-26       Impact factor: 9.261

Review 8.  Ubiquitin-dependent protein degradation at the endoplasmic reticulum and nuclear envelope.

Authors:  Adrian B Mehrtash; Mark Hochstrasser
Journal:  Semin Cell Dev Biol       Date:  2018-10-09       Impact factor: 7.727

Review 9.  Nucleotide Excision Repair: Finely Tuned Molecular Orchestra of Early Pre-incision Events.

Authors:  Qianzheng Zhu; Altaf A Wani
Journal:  Photochem Photobiol       Date:  2016-11-17       Impact factor: 3.421

10.  Folding and Misfolding of Human Membrane Proteins in Health and Disease: From Single Molecules to Cellular Proteostasis.

Authors:  Justin T Marinko; Hui Huang; Wesley D Penn; John A Capra; Jonathan P Schlebach; Charles R Sanders
Journal:  Chem Rev       Date:  2019-01-04       Impact factor: 60.622

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