Literature DB >> 26939549

Nucleic Acid i-Motif Structures in Analytical Chemistry.

Joan Josep Alba1, Anna Sadurní1, Raimundo Gargallo1.   

Abstract

Under the appropriate experimental conditions of pH and temperature, cytosine-rich segments in DNA or RNA sequences may produce a characteristic folded structure known as an i-motif. Besides its potential role in vivo, which is still under investigation, this structure has attracted increasing interest in other fields due to its sharp, fast and reversible pH-driven conformational changes. This "on/off" switch at molecular level is being used in nanotechnology and analytical chemistry to develop nanomachines and sensors, respectively. This paper presents a review of the latest applications of this structure in the field of chemical analysis.

Keywords:  Bioanalytical; DNA; electrochemistry; i-motif; spectroscopy

Mesh:

Substances:

Year:  2016        PMID: 26939549     DOI: 10.1080/10408347.2016.1143347

Source DB:  PubMed          Journal:  Crit Rev Anal Chem        ISSN: 1040-8347            Impact factor:   6.535


  9 in total

1.  Single-molecule analysis of i-motif within self-assembled DNA duplexes and nanocircles.

Authors:  Anoja Megalathan; Bobby D Cox; Peter D Wilkerson; Anisa Kaur; Kumar Sapkota; Joseph E Reiner; Soma Dhakal
Journal:  Nucleic Acids Res       Date:  2019-08-22       Impact factor: 16.971

2.  i-Clamp phenoxazine for the fine tuning of DNA i-motif stability.

Authors:  Vladimir B Tsvetkov; Timofei S Zatsepin; Evgeny S Belyaev; Yury I Kostyukevich; George V Shpakovski; Victor V Podgorsky; Galina E Pozmogova; Anna M Varizhuk; Andrey V Aralov
Journal:  Nucleic Acids Res       Date:  2018-04-06       Impact factor: 16.971

3.  Rational design of guiding elements to control folding topology in i-motifs with multiple quadruplexes.

Authors:  Alexander S Minasyan; Srinivas Chakravarthy; Suchitra Vardelly; Mark Joseph; Evgueni E Nesterov; Irina V Nesterova
Journal:  Nanoscale       Date:  2021-05-20       Impact factor: 7.790

4.  Evaluation of the Stability of DNA i-Motifs in the Nuclei of Living Mammalian Cells.

Authors:  Simon Dzatko; Michaela Krafcikova; Robert Hänsel-Hertsch; Tomas Fessl; Radovan Fiala; Tomas Loja; Daniel Krafcik; Jean-Louis Mergny; Silvie Foldynova-Trantirkova; Lukas Trantirek
Journal:  Angew Chem Int Ed Engl       Date:  2018-01-29       Impact factor: 15.336

5.  i-Motif DNA: structural features and significance to cell biology.

Authors:  Hala Abou Assi; Miguel Garavís; Carlos González; Masad J Damha
Journal:  Nucleic Acids Res       Date:  2018-09-19       Impact factor: 16.971

6.  pH-driven conformational switch between non-canonical DNA structures in a C-rich domain of EGFR promoter.

Authors:  Camilla Cristofari; Riccardo Rigo; Maria Laura Greco; Michele Ghezzo; Claudia Sissi
Journal:  Sci Rep       Date:  2019-02-04       Impact factor: 4.379

7.  Remodeling the conformational dynamics of I-motif DNA by helicases in ATP-independent mode at acidic environment.

Authors:  Bo Gao; Ya-Ting Zheng; Ai-Min Su; Bo Sun; Xu-Guang Xi; Xi-Miao Hou
Journal:  iScience       Date:  2021-12-06

8.  Studies on the interactions of Ag(i) with DNA and their implication on the DNA-templated synthesis of silver nanoclusters and on the interaction with complementary DNA and RNA sequences.

Authors:  Alejandra de la Hoz; Alba Navarro; Anna Aviñó; Ramon Eritja; Raimundo Gargallo
Journal:  RSC Adv       Date:  2021-03-01       Impact factor: 3.361

9.  Alkaloid Escholidine and Its Interaction with DNA Structures.

Authors:  Petra Jarošová; Pavel Hannig; Kateřina Kolková; Stefania Mazzini; Eva Táborská; Raimundo Gargallo; Gigliola Borgonovo; Roberto Artali; Petr Táborský
Journal:  Biology (Basel)       Date:  2021-11-24
  9 in total

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