Literature DB >> 26937452

Dataset on the effects of CYB5D2 on the distribution of HeLa cervical cancer cell cycle.

Yanyun Xie1, Yen Ting Shen2, Anil Kapoor3, Diane Ojo2, Fengxiang Wei4, Jason De Melo2, Xiaozeng Lin2, Nicholas Wong2, Judy Yan2, Lijian Tao5, Pierre Major6, Damu Tang2.   

Abstract

We have recently reported that CYB5D2 plays a role in suppression of cervical cancer tumorigenesis, "CYB5D2 displays tumor suppression activities towards cervical cancer" [1]. We provide the accompany data here describing the effects of CYB5D2 overexpression and addition of recombinant CYB5D2 on HeLa cell cycle distribution. Furthermore, we will present the conditions used to specifically determine CYB5D2 expression in primary cervical and cervical cancer tissues using immunohistochemistry (IHC) and the patient cohort involved in assessing the CYB5D2 protein levels in primary cervical and cervical cancer tissues.

Entities:  

Year:  2016        PMID: 26937452      PMCID: PMC4749936          DOI: 10.1016/j.dib.2016.01.036

Source DB:  PubMed          Journal:  Data Brief        ISSN: 2352-3409


Specifications Table Value of the data CYB5D2׳s effects on HeLa cell cycle distribution could be considered when investigating a role of CYB5D2 in regulating cell proliferation in other cell types. The data on CYB5D2 in affecting ERK and AKT activation should be helpful in researching CYB5D2׳s role in regulating growth factor receptor signaling. The data is useful for future investigations of CYB5D2-mediated cellular processes.

Data

Fig. 1 examines the cell cycle distribution of HeLa cells stably expressing either an empty vector (HeLa EV) or CYB5D2 (HeLa CYB5D2).
Fig. 1

Examination of the effects of CYB5D2 overexpression on HeLa cell cycle distribution. HeLa EV and HeLa CYB5D2 cells were seeded in 60 mm plates, and cultured for 2 days. At density of approximately 80% confluency, cell cycle distributions were determined using a flow cytometer.

Fig. 2 shows the status of AKT and ERK1/2 activation in HeLa EV and HeLa CYB5D2 cells. Activation of AKT and ERK1/2 was indirectly determined according to the specific phosphorylation events (see Fig. 2 legend for details).
Fig. 2

The impacts of ectopic expression of CYB5D2 on serum-induced activation of AKT and ERK kinases. HeLa EV and HeLa CYB5D2 cells at approximately 90% confluency were serum starved for 24 h, and stimulated with 10% of fetal bovine serum for the indicated periods, followed by western blot analysis for the phosphorylation of AKT at serine 473 (pAKT) and ERK at threonine 183 and tyrosine 185 (pERK1/2) as well as CYB5D2 and GAPDH. Experiments were performed twice; typical results from a single repeat are shown. SF: serum free.

CYB5D2 can be a secretory protein [2], [3] that has been indicated to inhibit Neuro2a cell proliferation [2]. The cell cycle distribution of HeLa cells was determined in the presence of either GST or GST-CYB5D2 (Fig. 3).
Fig. 3

Determination of the effects of recombinant CYB5D2 on HeLa cell cycle distribution. GST and GST-CYB5D2 recombinant proteins were purified from E. coli. HeLa EV and HeLa CYB5D2 cells were incubated with GST and GST-CYB5D2 at 1 mg/ml for 24 h, followed by the determination of cell cycle distribution. Cell proliferation in the presence of either protein was clearly observed. Experiments were carried out twice; typical results from a single repeat are shown.

Fig. 4 shows recognition of the CYB5D2 protein in human kidney tissues by the anti-CYB5D2 antibody in the presence of GST or GST-CYB5D2 as a competitor.
Fig. 4

Anti-CYB5D2 antibody specifically recognizes CYB5D2. Normal human kidney tissue was immunohistochemistry (IHC) stained with anti-CYB5D2 antibody without and with addition of recombinant GST-CYB5D2 or GST. The indicated regions were enlarged 3 fold and presented underneath of the individual panels. Recombinant GST-CYB5D2 and GST were produced in E. coli BL21. The recombinant protein GST-CYB5D2 was generated by N-terminal fusion of the transmembrane domain deletion mutant of CYB5D2 to GST. Anti-CYB5D2 antibody was affinity-purified by using GST-CYB5D2 as previously described [4]. For the competition experiments, GST-CYB5D2 or GST at 1 mg/ml was pre-incubated for one hour on ice with anti-CYB5D2 antibody (1:250) before applying to human kidney tissues.

Table 1 shows the tissues used to examine the CYB5D2 protein levels in normal cervical and cervical cancer tissues.
Table 1

Patient׳s clinical information.

PatientsPathological diagnosisAgeGrade
1Endocervical type adenocarcinoma421
2Endocervical type adenocarcinoma421
3Endometrioid adenocarcinoma with squamous metaplasia481
4Endometrioid adenocarcinoma with squamous metaplasia481
5Endocervical type adenocarcinoma521–2
6Endocervical type adenocarcinoma521–2
7Endometrioid adenocarcinoma321–2
8Endometrioid adenocarcinoma321–2
9Instestinal type adenocarcinoma722
10Instestinal type adenocarcinoma722
11Endocervical type adenocarcinoma432
12Endocervical type adenocarcinoma432
13Clear cell adenocarcinoma40
14Clear cell adenocarcinoma40
15Instestinal type adenocarcinoma512
16Instestinal type adenocarcinoma512–3
17Endocervical type adenocarcinoma502–3
18Endocervical type adenocarcinoma502–3
19Instestinal type adenocarcinoma342
20Instestinal type adenocarcinoma342
21Adenocarcinoma443
22Adenocarcinoma443
23Adenocarcinoma523
24Adenocarcinoma523
25Adenocarcinoma593
26Adenocarcinoma593
27Endometrioid adenocarcinoma263
28Endometrioid adenocarcinoma263
29Adenocarcinoma (fibrous tissue and blood vessel)32
30Adenocarcinoma (fibrous tissue and blood vessel)32
31Adenosquamous carcinoma43
32Adenosquamous carcinoma43
33Adenosquamous carcinoma64
34Adenosquamous carcinoma64
35Adenosquamous carcinoma38
36Adenosquamous carcinoma38
37Adenosquamous carcinoma54
38Adenosquamous carcinoma54
39Adenosquamous carcinoma43
40Adenosquamous carcinoma43
41Squamous cell carcinoma532
42Squamous cell carcinoma532
43Squamous cell carcinoma272
44Squamous cell carcinoma272
45Squamous cell carcinoma682–3
46Squamous cell carcinoma682–3
47Squamous cell carcinoma373
48Squamous cell carcinoma373
49Squamous cell carcinoma433
50Squamous cell carcinoma433
51Squamous cell carcinoma692
52Squamous cell carcinoma with necrosis692
53Squamous cell carcinoma (sparse)482
54Squamous cell carcinoma482
55Squamous cell carcinoma363
56Squamous cell carcinoma363
57Squamous cell carcinoma632
58Squamous cell carcinoma632
59Squamous cell carcinoma472
60Squamous cell carcinoma471–2
61Squamous cell carcinoma402
62Squamous cell carcinoma402
63Squamous cell carcinoma762
64Squamous cell carcinoma762
65Squamous cell carcinoma383
66Squamous cell carcinoma (fibrous tissue and blood vessel)38
67Squamous cell carcinoma362–3
68Squamous cell carcinoma362–3
69Squamous cell carcinoma623
70Squamous cell carcinoma623
71Squamous cell carcinoma513
72Squamous cell carcinoma513
73Squamous cell carcinoma323
74Squamous cell carcinoma323
75Squamous cell carcinoma583
76Squamous cell carcinoma583
77Squamous cell carcinoma273
78Squamous cell carcinoma273
79Squamous cell carcinoma392
80Squamous cell carcinoma393
81Cancer adjacent normal cervical tissue45
82Cancer adjacent normal cervical tissue45
83Cancer adjacent normal cervical canals tissue62
84Cancer adjacent normal cervical canals tissue62
85Cancer adjacent normal cervical canals tissue50
86Cancer adjacent normal cervical canals tissue50
87Cancer adjacent normal cervical tissue of No 1340
88Cancer adjacent normal cervical tissue of No 1340
89Cancer adjacent normal cervical tissue (fibrous tissue and blood vessel)60
90Cancer adjacent normal cervical tissue60
91Normal cervical tissue18
92Normal cervical tissue18
93Normal cervical tissue15
94Normal cervical tissue15
95Normal cervical tissue (fibrous tissue and blood vessel)21
96Normal cervical tissue (fibrous tissue and blood vessel)21
97Normal cervical tissue (with hyperplasia of glandular epithelium)21
98Normal cervical tissue (with hyperplasia of glandular epithelium)21
99Normal cervical tissue (fibrous tissue and blood vessel)19
100Normal cervical tissue (fibrous tissue and blood vessel)19

Experimental design, materials and methods

Experimental design and subjects

A tissue microarray slide was selected from US Biomax that contained 40 cervical squamous cell carcinoma and 20 normal cervical tissues (Table 1). HeLa cells stably expressing EV or CYB5D2 were recently constructed [1], [4].

Cell cycle distribution determination

Cell cycle distribution was determined by individualizing cells using 0.02% EDTA in PBS. Cells were stained with a propidium iodide (PI) solution (10 mM Tris pH7.5, 150 mM NaCl, 0.05 mg/ml PI, 0.1% sodium citrate, 0.2% Triton X-100, and 0.2 mg/ml DNase-free RNase A) overnight at 4 °C in dark.Cell cycle distribution was analyzed using a fluorescent automated cell sorting (FACS) (Bechman Coulter, CytomicsTM FC500).
Subject areaBiology
More specific subject areaCervical cancer tumorigenesis
Type of dataFigures, Table
How data was acquiredWestern blot analysis using the Bio-Rad mini-gel apparatus; cell cycle determination using a flow cytometer (Bechman Coulter, CytomicsTM FC500)
Data formatFiltered and analyzed
Experimental factorsCells are serum-starved for 24 h, followed by stimulation with 10% of bovine fetal serum (FBS) to examine AKT and ERK activation
Experimental featuresCell cycle progression and protein expression
Data source locationHamilton, Ontario, Canada
Data accessibilityData is within this article
  4 in total

1.  CYB5D2 enhances HeLa cells survival of etoposide-induced cytotoxicity.

Authors:  Yanyun Xie; Anthony Bruce; Lizhi He; Fengxiang Wei; Lijian Tao; Damu Tang
Journal:  Biochem Cell Biol       Date:  2011-06-06       Impact factor: 3.626

2.  CYB5D2 displays tumor suppression activities towards cervical cancer.

Authors:  Yanyun Xie; Yen Ting Shen; Anil Kapoor; Diane Ojo; Fengxiang Wei; Jason De Melo; Xiaozeng Lin; Nicholas Wong; Judy Yan; Lijian Tao; Pierre Major; Damu Tang
Journal:  Biochim Biophys Acta       Date:  2015-12-12

3.  Neuferricin, a novel extracellular heme-binding protein, promotes neurogenesis.

Authors:  Ikuo Kimura; Yoshiaki Nakayama; Morichika Konishi; Teruyuki Kobayashi; Masahiro Mori; Masaki Ito; Akira Hirasawa; Gozoh Tsujimoto; Mitsuhiro Ohta; Nobuyuki Itoh; Masafumi Fujimoto
Journal:  J Neurochem       Date:  2009-12-03       Impact factor: 5.372

4.  CYB5D2 requires heme-binding to regulate HeLa cell growth and confer survival from chemotherapeutic agents.

Authors:  Anthony Bruce; Adrian P Rybak
Journal:  PLoS One       Date:  2014-01-22       Impact factor: 3.240

  4 in total
  2 in total

1.  Bioinformatics analysis of differentially expressed genes and pathways in the development of cervical cancer.

Authors:  Baojie Wu; Shuyi Xi
Journal:  BMC Cancer       Date:  2021-06-26       Impact factor: 4.430

2.  Expression of CYB5D2 is associated with epithelial-mesenchymal transition and survival rates in patients with cervical cancer.

Authors:  Dongxue Li; Bing Qiu; Xiaohang Chen; Liang Hu; Lijuan Wen; Fengxiang Wei
Journal:  Transl Cancer Res       Date:  2020-02       Impact factor: 1.241

  2 in total

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