Literature DB >> 26931688

General formulation of vibronic spectroscopy in internal coordinates.

Alberto Baiardi1, Julien Bloino2, Vincenzo Barone1.   

Abstract

Our general platform integrating time-independent and time-dependent evaluations of vibronic effects at the harmonic level for different kinds of absorption and emission one-photon, conventional and chiral spectroscopies has been extended to support various sets of internal coordinates. Thanks to the implementation of analytical first and second derivatives of different internal coordinates with respect to cartesian ones, both vertical and adiabatic models are available, with the inclusion of mode mixing and, possibly, Herzberg-Teller contributions. Furthermore, all supported non-redundant sets of coordinates are built from a fully automatized algorithm using only a primitive redundant set derived from a bond order-based molecular topology. Together with conventional stretching, bending, and torsion coordinates, the availability of additional coordinates (including linear and out-of-plane bendings) allows a proper treatment of specific systems, including, for instance, inter-molecular hydrogen bridges. A number of case studies are analysed, showing that cartesian and internal coordinates are nearly equivalent for semi-rigid systems not experiencing significant geometry distortions between initial and final electronic states. At variance, delocalized (possibly weighted) internal coordinates become much more effective than their cartesian counterparts for flexible systems and/or in the presence of significant geometry distortions accompanying electronic transitions.

Entities:  

Year:  2016        PMID: 26931688      PMCID: PMC5732572          DOI: 10.1063/1.4942165

Source DB:  PubMed          Journal:  J Chem Phys        ISSN: 0021-9606            Impact factor:   3.488


  33 in total

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Journal:  J Phys Chem B       Date:  2012-07-30       Impact factor: 2.991

2.  Accurate Simulation of Resonance-Raman Spectra of Flexible Molecules: An Internal Coordinates Approach.

Authors:  Alberto Baiardi; Julien Bloino; Vincenzo Barone
Journal:  J Chem Theory Comput       Date:  2015-06-01       Impact factor: 6.006

3.  Harmonic Vibrational Analysis in Delocalized Internal Coordinates.

Authors:  Frank Jensen; David S Palmer
Journal:  J Chem Theory Comput       Date:  2010-12-03       Impact factor: 6.006

4.  Temperature Dependence of Radiative and Nonradiative Rates from Time-Dependent Correlation Function Methods.

Authors:  Shiladitya Banerjee; Alberto Baiardi; Julien Bloino; Vincenzo Barone
Journal:  J Chem Theory Comput       Date:  2016-01-08       Impact factor: 6.006

5.  Geometries and properties of excited states in the gas phase and in solution: theory and application of a time-dependent density functional theory polarizable continuum model.

Authors:  Giovanni Scalmani; Michael J Frisch; Benedetta Mennucci; Jacopo Tomasi; Roberto Cammi; Vincenzo Barone
Journal:  J Chem Phys       Date:  2006-03-07       Impact factor: 3.488

6.  Integrated computational approach to vibrationally resolved electronic spectra: anisole as a test case.

Authors:  Julien Bloino; Malgorzata Biczysko; Orlando Crescenzi; Vincenzo Barone
Journal:  J Chem Phys       Date:  2008-06-28       Impact factor: 3.488

7.  The temperature dependence of radiationless transition rates from ab initio computations.

Authors:  Raffaele Borrelli; Andrea Peluso
Journal:  Phys Chem Chem Phys       Date:  2011-01-21       Impact factor: 3.676

8.  Origin invariance in vibrational resonance Raman optical activity.

Authors:  Luciano N Vidal; Franco Egidi; Vincenzo Barone; Chiara Cappelli
Journal:  J Chem Phys       Date:  2015-05-07       Impact factor: 3.488

9.  Density functional calculations of the vibronic structure of electronic absorption spectra.

Authors:  Marc Dierksen; Stefan Grimme
Journal:  J Chem Phys       Date:  2004-02-22       Impact factor: 3.488

10.  Harmonic Models in Cartesian and Internal Coordinates to Simulate the Absorption Spectra of Carotenoids at Finite Temperatures.

Authors:  Javier Cerezo; José Zúñiga; Alberto Requena; Francisco J Ávila Ferrer; Fabrizio Santoro
Journal:  J Chem Theory Comput       Date:  2013-10-09       Impact factor: 6.006

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  9 in total

1.  Modeling the Electronic Absorption Spectra of the Indocarbocyanine Cy3.

Authors:  Mohammed I Sorour; Andrew H Marcus; Spiridoula Matsika
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2.  Effective Inclusion of Mechanical and Electrical Anharmonicity in Excited Electronic States: VPT2-TDDFT Route.

Authors:  Franco Egidi; David B Williams-Young; Alberto Baiardi; Julien Bloino; Giovanni Scalmani; Michael J Frisch; Xiaosong Li; Vincenzo Barone
Journal:  J Chem Theory Comput       Date:  2017-05-24       Impact factor: 6.006

3.  Simulation of Vibronic Spectra of Flexible Systems: Hybrid DVR-Harmonic Approaches.

Authors:  Alberto Baiardi; Julien Bloino; Vincenzo Barone
Journal:  J Chem Theory Comput       Date:  2017-06-02       Impact factor: 6.006

4.  Assessment of Electron Propagator Methods for the Simulation of Vibrationally Resolved Valence and Core Photoionization Spectra.

Authors:  A Baiardi; L Paoloni; V Barone; V G Zakrzewski; J V Ortiz
Journal:  J Chem Theory Comput       Date:  2017-06-09       Impact factor: 6.006

5.  Toward a General Yet Effective Computational Approach for Diffusive Problems: Variable Diffusion Tensor and DVR Solution of the Smoluchowski Equation along a General One-Dimensional Coordinate.

Authors:  Andrea Piserchia; Vincenzo Barone
Journal:  J Chem Theory Comput       Date:  2016-07-25       Impact factor: 6.006

6.  Simulation of Vacuum UV Absorption and Electronic Circular Dichroism Spectra of Methyl Oxirane: The Role of Vibrational Effects.

Authors:  Manuel Hodecker; Malgorzata Biczysko; Andreas Dreuw; Vincenzo Barone
Journal:  J Chem Theory Comput       Date:  2016-05-26       Impact factor: 6.006

7.  Interplay of Stereoelectronic and Vibrational Modulation Effects in Tuning the UPS Spectra of Unsaturated Hydrocarbon Cage Compounds.

Authors:  Lorenzo Paoloni; Marco Fusè; Alberto Baiardi; Vincenzo Barone
Journal:  J Chem Theory Comput       Date:  2020-07-29       Impact factor: 6.006

8.  Computational simulation of vibrationally resolved spectra for spin-forbidden transitions.

Authors:  Franco Egidi; Marco Fusè; Alberto Baiardi; Julien Bloino; Xiaosong Li; Vincenzo Barone
Journal:  Chirality       Date:  2018-05-04       Impact factor: 2.437

9.  CPL Spectra of Camphor Derivatives in Solution by an Integrated QM/MD Approach.

Authors:  Sara Del Galdo; Marco Fusè; Vincenzo Barone
Journal:  Front Chem       Date:  2020-07-07       Impact factor: 5.221

  9 in total

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