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Literature DB >> 26931415

Elevating the alternating-access model.

Renae M Ryan¹, Robert J Vandenberg¹.

Abstract

Mesh：

Substances：

Year: 2016 PMID： 26931415 DOI： 10.1038/nsmb.3179

Source DB: PubMed Journal: Nat Struct Mol Biol ISSN： 1545-9985 Impact factor: 15.369

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18 in total

1. Coupling substrate and ion binding to extracellular gate of a sodium-dependent aspartate transporter.

Authors: Olga Boudker; Renae M Ryan; Dinesh Yernool; Keiko Shimamoto; Eric Gouaux
Journal: Nature Date: 2007-01-17 Impact factor: 49.962

2. Structural and mechanistic insights into prokaryotic energy-coupling factor transporters.

Authors: Dirk J Slotboom
Journal: Nat Rev Microbiol Date: 2013-12-23 Impact factor: 60.633

3. Structure and function of Neisseria gonorrhoeae MtrF illuminates a class of antimetabolite efflux pumps.

Authors: Chih-Chia Su; Jani Reddy Bolla; Nitin Kumar; Abhijith Radhakrishnan; Feng Long; Jared A Delmar; Tsung-Han Chou; Kanagalaghatta R Rajashankar; William M Shafer; Edward W Yu
Journal: Cell Rep Date: 2015-03-26 Impact factor: 9.423

4. Simple allosteric model for membrane pumps.

Authors: O Jardetzky
Journal: Nature Date: 1966-08-27 Impact factor: 49.962

5. Inward-facing conformation of glutamate transporters as revealed by their inverted-topology structural repeats.

Authors: Thomas J Crisman; Shaogang Qu; Baruch I Kanner; Lucy R Forrest
Journal: Proc Natl Acad Sci U S A Date: 2009-11-19 Impact factor: 11.205

6. Crystal structure of the Alcanivorax borkumensis YdaH transporter reveals an unusual topology.

Authors: Jani Reddy Bolla; Chih-Chia Su; Jared A Delmar; Abhijith Radhakrishnan; Nitin Kumar; Tsung-Han Chou; Feng Long; Kanagalaghatta R Rajashankar; Edward W Yu
Journal: Nat Commun Date: 2015-04-20 Impact factor: 14.919

7. Structure and transport mechanism of the sodium/proton antiporter MjNhaP1.

Authors: Cristina Paulino; David Wöhlert; Ekaterina Kapotova; Özkan Yildiz; Werner Kühlbrandt
Journal: Elife Date: 2014-11-26 Impact factor: 8.140

8. Structural basis of the alternating-access mechanism in a bile acid transporter.

Authors: Xiaoming Zhou; Elena J Levin; Yaping Pan; Jason G McCoy; Ruchika Sharma; Brian Kloss; Renato Bruni; Matthias Quick; Ming Zhou
Journal: Nature Date: 2013-12-08 Impact factor: 49.962

9. Crystal structure of the sodium-proton antiporter NhaA dimer and new mechanistic insights.

Authors: Chiara Lee; Shoko Yashiro; David L Dotson; Povilas Uzdavinys; So Iwata; Mark S P Sansom; Christoph von Ballmoos; Oliver Beckstein; David Drew; Alexander D Cameron
Journal: J Gen Physiol Date: 2014-12 Impact factor: 4.086

10. The bacterial dicarboxylate transporter VcINDY uses a two-domain elevator-type mechanism.

Authors: Christopher Mulligan; Cristina Fenollar-Ferrer; Gabriel A Fitzgerald; Ariela Vergara-Jaque; Desirée Kaufmann; Yan Li; Lucy R Forrest; Joseph A Mindell
Journal: Nat Struct Mol Biol Date: 2016-02-01 Impact factor: 15.369

15 in total

1. Multiscale Simulations of Biological Membranes: The Challenge To Understand Biological Phenomena in a Living Substance.

Authors: Giray Enkavi; Matti Javanainen; Waldemar Kulig; Tomasz Róg; Ilpo Vattulainen
Journal: Chem Rev Date: 2019-03-12 Impact factor: 60.622

2. An amino-terminal point mutation increases EAAT2 anion currents without affecting glutamate transport rates.

Authors: Bettina Kolen; Daniel Kortzak; Arne Franzen; Christoph Fahlke
Journal: J Biol Chem Date: 2020-08-20 Impact factor: 5.157

3. Ligand-induced conformational dynamics of the Escherichia coli Na⁺/H⁺ antiporter NhaA revealed by hydrogen/deuterium exchange mass spectrometry.

Authors: Martin Lorenz Eisinger; Aline Ricarda Dörrbaum; Hartmut Michel; Etana Padan; Julian David Langer
Journal: Proc Natl Acad Sci U S A Date: 2017-10-16 Impact factor: 11.205

Elevating the alternating-access model.

1. Coupling substrate and ion binding to extracellular gate of a sodium-dependent aspartate transporter.

2. Structural and mechanistic insights into prokaryotic energy-coupling factor transporters.

3. Structure and function of Neisseria gonorrhoeae MtrF illuminates a class of antimetabolite efflux pumps.

4. Simple allosteric model for membrane pumps.

5. Inward-facing conformation of glutamate transporters as revealed by their inverted-topology structural repeats.

6. Crystal structure of the Alcanivorax borkumensis YdaH transporter reveals an unusual topology.

7. Structure and transport mechanism of the sodium/proton antiporter MjNhaP1.

8. Structural basis of the alternating-access mechanism in a bile acid transporter.

9. Crystal structure of the sodium-proton antiporter NhaA dimer and new mechanistic insights.

10. The bacterial dicarboxylate transporter VcINDY uses a two-domain elevator-type mechanism.

1. Multiscale Simulations of Biological Membranes: The Challenge To Understand Biological Phenomena in a Living Substance.

2. An amino-terminal point mutation increases EAAT2 anion currents without affecting glutamate transport rates.

3. Ligand-induced conformational dynamics of the Escherichia coli Na⁺/H⁺ antiporter NhaA revealed by hydrogen/deuterium exchange mass spectrometry.

4. Local conformational dynamics regulating transport properties of a Cl^- /H⁺ antiporter.

Review 5. Analysis of the quality of crystallographic data and the limitations of structural models.

6. Tuning the ion selectivity of glutamate transporter-associated uncoupled conductances.

Review 7. Transport mechanism of a glutamate transporter homologue GltPh.

8. Multiscale Kinetic Modeling Reveals an Ensemble of Cl^-/H⁺ Exchange Pathways in ClC-ec1 Antiporter.

9. Structural insights into the gating of DNA passage by the topoisomerase II DNA-gate.

10. The Structure and Mechanism of Drug Transporters.