| Literature DB >> 26929638 |
Sohyun Jeong1, Jae Hyun Kim1, Myeong Gyu Kim1, Nayoung Han1, In-Wha Kim1, Therasa Kim1, Jung Mi Oh1.
Abstract
BACKGROUND: CASR gene appears to be involved in cancer biology and physiology. However, a number of studies investigating CASR polymorphisms and cancer risks have presented inconclusive results. Thus, a systematic review and a meta-analysis of the effect of CASR polymorphisms on several cancer risks were performed to suggest a statistical evidence for the association of CASR polymorphisms with cancer risks.Entities:
Keywords: colorectal cancer; rs1042636; rs1801725; rs1801726; systematic review
Year: 2016 PMID: 26929638 PMCID: PMC4755434 DOI: 10.2147/OTT.S97602
Source DB: PubMed Journal: Onco Targets Ther ISSN: 1178-6930 Impact factor: 4.147
Main characteristics of included studies of CASR associated with cancer risks
| Cancer type | Reference | Country (ethnicity) | Study design | Cases (n) | Controls (n) | Genotyping method (HWE) | SNP | Tumor site |
|---|---|---|---|---|---|---|---|---|
| Colorectal | Speer et al | Hungary (Caucasian) | Hospital-based case–control | 56 | 112 | PCR (HWE: N/A) | rs1801725 (A986S) | Rectum |
| Peters et al | USA (94% Caucasian) | Population-based nested case–control | 716 | 729 | Taqman (HWE: A986S [ | rs1801725 (A986S), rs1042636 (A990G), rs1801726 (Q1101E) | Distal colorectum | |
| Fuszek et al | Hungary (Caucasian) | Population-based case–control | 70 | 201 | PCR (HWE: N/A) | rs1801725 | Colorectum | |
| Fuszek et al | Hungary (Caucasian) | Population-based case–control | 70 | 201 | PCR (HWE: N/A) | rs1801725 | Colorectum | |
| Bácsi et al | Hungary (Caucasian) | Population-based case–control | 278 | 260 | Taqman (HWE: N/A) | rs1801725 | Colorectum | |
| Dong et al | USA (Mixed, Caucasian predominant) | Population-based case–control | 1,600 | 1,949 | MALDI-TOF (HWE: | 17 SNPs | Proximal colon, distal colon | |
| Jenab et al | Europe (Caucasian) | Population-based nested case–control | 1,160 | 1,248 | Taqman (meet HWE) | rs1801725 | Colorectum, colon, rectum | |
| Jacobs et al | USA, Australia (mixed, Caucasian predominant) | Population-based discordant sibship case–control | 1,802 | 2,874 | Illumina Golden gate platform (HWE: N/A) | 36 SNPs | Proximal colon, distal colon, rectum | |
| Safaei et al | Iran (Caucasian) | Hospital-based case–control | 105 | 105 | PCR-RFLP (HWE: N/A) | rs1801725 | Colorectum | |
| Fedirko et al | Europe (Caucasian) | Population-based cohort | 1,137 | N/A | Taqman (HWE: N/A) | rs1801725 | Colorectum | |
| Hibler et al | USA Caucasian (white) | Population-based cohort | 1,439 | N/A | Illumina Golden gate platform (meet HWE) | 35 SNPs | Proximal colon, distal colon | |
| Kim et al | Korea (Asian) | Hospital-based case–control | 420 | 815 | Taqman (meet HWE) | rs10934578, rs12485716, rs4678174, rs2270916 | Proximal colon, distal colon, rectum | |
| Mahmoudi et al | Iran (Caucasian) | Hospital-based case–control | 350 | 510 | PCR-RFLP (HWE: N/A) | rs1801725 | Colorectum | |
| Prostate | Schwartz et al | USA (African–American) | Population-based case–control | 458 | 248 | Illumina Beadlab system: rs1042636, rs1801726; Taqman: rs1801725 (meet HWE) | rs1801725, rs1042636, rs1801726 | Prostate |
| Szendroi et al | Hungary (Caucasian) | Hospital-based case–control | 204 | 102 | PCR (HWE >0.05) | rs1801725 | Prostate | |
| Shui et al | USA (Caucasian with European decent) | Population-based nested case–control | 1,193 | 1,244 | Open-array SNP genotyping platform (HWE: | 18 SNPs | Prostate | |
| Jorde et al | Norway (Caucasian) | Population-based case–cohort | 370 | 1,647 | KBioscience competitive allele-specific PCR (meet HWE) | rs17251221, rs1801725 | Prostate, lung, breast, colorectum | |
| Breast | Li et al | People’s Republic of China (Asian) | Hospital-based case–control | 217 | 231 | Taqman (HWE: | rs17251221 | Breast |
| Pancreas | Anderson et al | Canada (Caucasian) | Population-based case–control | 628 | 1,193 | MassARRAY, iPLEX Gold sequenom Platform (meet HWE) | 13 SNPs | Pancreas |
| Neuroblastoma | Masvidal et al | Spain (Caucasian) | Cohort | 65 | N/A | RT-PCR (meet HWE) | Haplotype of rs1801725, rs1042636, rs1801726 | Nerve |
Abbreviations: HWE, Hardy–Weinberg equilibrium; PCR, polymerase chain reaction; N/A, not applicable; MALDI-TOF, matrix-assisted laser desorption/ionization-time of flight; SNP, single-nucleotide polymorphism; RFLP, restriction fragment length polymorphism; RT, reverse transcription.
Stratified analysis of the three nonsynonymous SNPs (rs1801725, rs1042636, rs1801726) in CASR and colorectal cancer risk by three genetic models and cancer sites
| Variable
| N | n (case/control) | Association
| Heterogeneity
| Publication bias
| ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Genetic model | Site | OR | 95% CI | Model | Funnel plot | Egger’s | |||||
| TT vs GG | Colorectal | 6 | 4,209/4,801 | 1.152 | 0.859–1.543 | 0.379 | 25.769 | 0.345 | Fixed | None | 0.181 |
| GG vs AA | Proximal | 3 | 4,841/4,823 | 0.679 | 0.536–0.859 | 0.001 | 42.519 | 0.176 | Fixed | None | 0.634 |
| Distal | 4 | 5,557/5,552 | 0.753 | 0.587–0.967 | 0.026 | 0 | 0.396 | Fixed | None | 0.957 | |
| AG + GG vs AA | Proximal | 3 | 4,841/4,823 | 0.797 | 0.505–1.260 | 0.332 | 83.839 | 0.002 | Random | None | 0.175 |
| Distal | 3 | 4,841/4,823 | 0.854 | 0.710–1.029 | 0.097 | 44.491 | 0.165 | Fixed | None | 0.451 | |
| GG vs CC | Proximal | 3 | 4,841/4,823 | 1.137 | 0.820–1.575 | 0.441 | 0 | 0.408 | Fixed | None | 0.601 |
| Distal | 4 | 5,557/5,552 | 1.418 | 1.017–1.977 | 0.039 | 0 | 0.676 | Fixed | None | 0.770 | |
| CG + GG vs CC | Proximal | 3 | 4,841/4,823 | 1.095 | 0.882–1.360 | 0.411 | 0 | 0.481 | Fixed | None | 0.987 |
| Distal | 3 | 4,841/4,823 | 1.073 | 0.857–1.344 | 0.537 | 59.415 | 0.085 | Random | None | 0.414 | |
Notes:
Number of studies included in the meta-analysis.
Significant result.
Abbreviations: SNP, single-nucleotide polymorphism; OR, odds ratio; CI, confidence interval.
Figure 1Association of rs1801725 polymorphism with colorectal cancer risk by additive genetic model.
Figure 2Association of rs1042636 polymorphism with colorectal cancer risk stratified by cancer sites and three genetic models.
Figure 3Association of rs1801726 polymorphism with colorectal cancer risk stratified by cancer sites and three genetic models.
Significant SNPs or haplo/diplotype of CASR found in selected studies stratified by cancer sites
| Cancer (specified by included studies) | SNP/haplotype/diplotype | Genotype | Case | Control | OR | 95% CI | Cofactor other than | References | |
|---|---|---|---|---|---|---|---|---|---|
| Colorectum | rs1801725 (G/T) | GG + GT vs TT | 278 | 260 | 4.01 | 1.33–12.07 | 0.026 | – | Bácsi et al |
| rs1801725 (G/T) | GG vs TT | 105 | 105 | 0.56 | 0.31–0.99 | 0.04 | Safaei et al | ||
| rs2270916 (T/C) | TT vs CC | 420 | 815 | 2.11 | 1.27–3.51 | NA | With low Ca intake | Kim et al | |
| rs10934578 (T/G) | TT vs GG | 420 | 815 | 1.84 | 1.12–3.00 | NA | With low Ca intake | Kim et al | |
| rs12485716 (G/A) | GG vs AA | 420 | 815 | 1.89 | 1.14–3.11 | NA | With low Ca intake | Kim et al | |
| rs4678174 (T/C) | TT vs CC | 420 | 815 | 1.73 | 1.06–2.83 | NA | With low Ca intake | Kim et al | |
| rs1042636 (A/G) | AA vs GG | 1,439 | 0 | 0.63 | 0.47–0.85 | 0.002 (0.104) | – | Hibler et al | |
| rs1042636 (A/G) | AA vs AG + GG | 1,439 | 0 | 0.61 | 0.45–0.83 | 0.002 (0.091) | – | Hibler et al | |
| Proximal colon | rs12485716 (G/A) | GG vs GA + AA | 1,600 | 1,949 | 0.84 | 0.71–1.00 | NA | – | Dong et al |
| rs4678174 (T/C) | TT vs TC + CC | 1,600 | 1,949 | 0.83 | 0.70–0.98 | NA | – | Dong et al | |
| rs4678174 (T/C) | TT vs CC | 1,600 | 1,949 | 0.83 | 0.69–0.99 | NA | – | Dong et al | |
| rs10934578 (T/G) | TT vs GG | 1,600 | 1,949 | 1.35 | 1.01–1.81 | NA | – | Dong et al | |
| rs2270916 (T/C) | TT vs CC | 1,600 | 1,949 | 0.43 | 0.19–0.97 | NA | – | Dong et al | |
| rs4678174 (T/C), rs2270916 (T/C) | Haplotype CC/TT | 1,600 | 1,949 | 0.80 | 0.67–0.97 | NA | – | Dong et al | |
| rs17203502 (A/G) | AA + AG vs GG | 1,802 | 2,874 | 0.55 | 0.40–0.78 | 0.001 (0.036) | – | Jacobs et al | |
| rs1501900 (A/T) | AA vs TT | 1,802 | 2,874 | 0.71 | 0.54–0.94 | 0.017 (0.514) | – | Jacobs et al | |
| AA vs AT + TT | 1,802 | 2,874 | 0.71 | 0.52–0.98 | 0.035 (0.744) | – | |||
| rs17282022 (A/G) | AA + AG vs GG | 1,802 | 2,874 | 0.62 | 0.45–0.85 | 0.003 (0.136) | – | Jacobs et al | |
| rs3845918 (A/G) | AA vs GG | 1,802 | 2,874 | 1.30 | 1.01–1.66 | 0.041 (0.789) | – | Jacobs et al | |
| AA vs AG + GG | 1,802 | 2,874 | 1.51 | 1.12–2.02 | 0.006 (0.257) | – | |||
| rs4678013 (G/T) | GG vs TT | 1,802 | 2,874 | 0.69 | 0.52–0.90 | 0.007 (0.285) | – | Jacobs et al | |
| GG vs GT + TT | 1,802 | 2,874 | 0.69 | 0.51–0.94 | 0.020 (0.566) | – | |||
| rs6764205 (C/T) | CC vs CT + TT | 1,802 | 2,874 | 1.42 | 1.06–1.91 | 0.020 (0.565) | – | Jacobs et al | |
| rs1042636 (A/G) | AA vs GG | 1,439 | 0 | 0.55 | 0.40–0.77 | <0.001 (0.022) | – | Hibler et al | |
| AA vs AG + GG | 1,439 | 0 | 0.51 | 0.36–0.73 | <0.001 (0.011) | – | |||
| rs12635478 (A/C) | AA vs CC | 1,439 | 0 | 0.82 | 0.69–0.97 | 0.017 (0.523) | – | Hibler et al | |
| AA vs AC + CC | 1,439 | 0 | 0.74 | 0.59–0.92 | 0.008 (0.299) | – | |||
| rs3749208 (C/T) | CC vs TT | 1,439 | 0 | 0.82 | 0.69–0.97 | 0.020 (0.563) | – | Hibler et al | |
| CC vs CT + TT | 1,439 | 0 | 0.74 | 0.59–0.92 | 0.008 (0.30) | – | |||
| Distal colon | rs1801725 (G/T)–rs1042636 | Diplotype GAC- | 410 | 369 | 0.56 | 0.36–0.88 | NA | – | Peters et al |
| (A/G)–rs1801726 (C/G) | GAG/GAC-GAC | ||||||||
| rs10222633 (A/G) | AA vs AG + GG | 1,802 | 2,874 | 0.69 | 0.48–0.98 | 0.036 (0.757) | – | Jacobs et al | |
| rs1802757 (C/T) | CC vs CT + TT | 1,802 | 2,874 | 0.68 | 0.47–1.00 | 0.050 (0.850) | – | Jacobs et al | |
| rs1042636 (A/G) | AA vs GG | 1,439 | 0 | 0.63 | 0.44–0.91 | 0.015 (0.478) | – | Hibler et al | |
| AA vs AG + GG | 1,439 | 0 | 0.62 | 0.42–0.92 | 0.017 (0.511) | – | |||
| rs1801726 (C/G) | CC vs GG | 1,439 | 0 | 1.58 | 1.02–2.45 | 0.042 (0.802) | – | Hibler et al | |
| CC vs CG + GG | 1,439 | 0 | 1.59 | 1.01–2.50 | 0.048 (0.841) | – | |||
| Rectum | rs1801725 (A/T) | AA vs TT | 32 | 0 | 0.107 | 0.018–0.635 | 0.012 | ERBB2, EGFR, p53, | Speer et al |
| rs1801726 (C/G) | CC vs GG | 1,802 | 2,874 | 0.53 | 0.29–0.96 | 0.036 (0.755) | – | Jacobs et al | |
| rs17282008 (C/G) | CC vs GG | 1,802 | 2,874 | 1.31 | 1.01–1.72 | 0.045 (0.820) | – | Jacobs et al | |
| rs4678174 (T/C) | TT + TC vs CC | 1,802 | 2,874 | 0.60 | 0.37–0.98 | 0.041 (0.794) | – | Jacobs et al | |
| rs7644390 (C/T) | CC vs CT + TT | 1,802 | 2,874 | 1.38 | 1.00–1.91 | 0.050 (0.847) | – | Jacobs et al | |
| Prostate | rs1801726 (C/G) | CC vs GG | 458 | 248 | 0.16 | 0.03–0.74 | 0.01 | – | Schwartz et al |
| rs17251221 (G/A) | GG vs AA | 370 | 1,647 | 2.32 | 1.24–4.36 | <0.01 | – | Jorde et al | |
| rs6438705 (G/A) | GG vs AA | 113 | 1,244 | 0.65 | 0.42–0.99 | 0.04 | – | Shui et al | |
| rs13083990 (T/C) | TT vs CC | 113 | 1,244 | 0.65 | 0.47–0.89 | 0.008 | Low plasma 25(OH)D, low Ca intake | Shui et al | |
| rs2270916 (T/C) | TT vs CC | 113 | 1,244 | 1.55 | 1.09–2.20 | 0.01 | Low plasma 25(OH)D, | Shui et al | |
| rs1801725 (G/T) | GG vs TT | 73 | 614 | 0.54 | 0.31–0.95 | 0.03 | Low plasma 25(OH)D | Shui et al | |
| rs1979869 (C/T) | CC vs TT | 73, 74 | 614, 829 | 0.59 | 0.38–0.94 | 0.03 | Low plasma 25(OH)D, low Ca intake | Shui et al | |
| rs7637874 (C/T) | CC vs TT | 74 | 829 | 1.62 | 1.11–2.35 | 0.01 | Low Ca intake | Shui et al | |
| Breast | rs17251221 (G/A) | GG vs AA | 403 | 2,256 | 1.948 | 1.216–3.120 | 0.007 | – | Jorde et al |
| GG vs GA + AA | 217 | 231 | 10.957 | 1.374–87.393 | 0.007 | – | Li et al | ||
| Pancreas | rs3804592 (G/A) | GG vs AA | 628 | 1,193 | 0.81 | 0.043 | – | Anderson et al | |
| Neuroblastoma | rs1801725 (G/T), rs1042636 (A/G), rs1801726 (C/G) | Haplotype TAC | 65 | 0 | 2.74 (HR) | 1.20–6.25 | 0.016 | – | Masvidal et al |
Notes:
P-values were adjusted for multiple comparisons using a modification of P for correlated tests developed by Conneely and Boehnke.80 ACT
Abbreviations: SNP, single-nucleotide polymorphism; OR, odds ratio; CI, confidence interval; NA, not applicable; HR, hazard ratio; PACT, P-value adjusted for correlated tests.
Methodological tool of quality assessment of individual studies included for CASR polymorphisms and cancer risk
| Criteria | Quality score |
|---|---|
| Representativeness of cases | |
| Consecutive/randomly selected from case population with clearly defined sampling frame | 2 |
| Consecutive/randomly selected from case population without clearly defined sampling frame or with extensive inclusion/exclusion criteria | 1 |
| No method of selection described | 0 |
| Representativeness of controls | |
| Controls were consecutive/randomly drawn from the same sampling frame (ward/community) as cases | 2 |
| Controls were consecutive/randomly drawn from a different sampling frame as cases | 1 |
| Not described | 0 |
| Ascertainment of cancer diagnosis | |
| Clearly described objective criteria for diagnosis of asthma | 2 |
| Diagnosis of asthma by patient self-report or by patient history | 1 |
| Not described | 0 |
| Ascertainment of controls | |
| Controls were tested to screen out cancer | 2 |
| Controls were subjects who did not report cancer; no objective testing | 1 |
| Not described | 0 |
| Genotyping examination | |
| Genotyping done under “blinded” condition | 1 |
| Unblinded or not mentioned | 0 |
| Hardy–Weinberg equilibrium | |
| Hardy–Weinberg equilibrium in control group | 2 |
| Hardy–Weinberg disequilibrium in control group | 1 |
| No checking for Hardy–Weinberg equilibrium | 0 |
| Association assessment | |
| Assess association between genotypes and cancers with appropriate statistics and adjustment for confounders | 2 |
| Assess association between genotypes and cancers with appropriate statistics without adjustment for confounders | 1 |
| Inappropriate statistics used | 0 |
Results of comprehensive quality assessment of included studies for the meta-analysis and systematic review
| References | Representativeness of cases | Representativeness of controls | Ascertainment of cancer diagnosis | Ascertainment of controls | Genotyping examination | HWE | Association assessment | Total score |
|---|---|---|---|---|---|---|---|---|
| Speer et al | 1 | 2 | 0 | 1 | 0 | 2 | 1 | 7 |
| Peters et al | 2 | 2 | 1 | 2 | 1 | 2 | 2 | 12 |
| Fuszek et al | 2 | 1 | 1 | 0 | 0 | 0 | 1 | 5 |
| Bácsi et al | 2 | 1 | 1 | 1 | 1 | 2 | 1 | 9 |
| Dong et al | 2 | 2 | 1 | 1 | 1 | 2 | 2 | 11 |
| Jenab et al | 2 | 2 | 1 | 1 | 1 | 2 | 2 | 11 |
| Jacobs et al | 2 | 2 | 1 | 1 | 0 | 0 | 2 | 8 |
| Schwartz et al | 2 | 2 | 1 | 2 | 1 | 2 | 2 | 12 |
| Szendroi et al | 2 | 2 | 1 | 1 | 0 | 2 | 2 | 10 |
| Safaei et al | 2 | 2 | 1 | 2 | 0 | 1 | 1 | 9 |
| Fedirko et al | 2 | N/A | 1 | N/A | 0 | 0 | 2 | 5 |
| Shui et al | 2 | 2 | 1 | 2 | 1 | 2 | 2 | 12 |
| Hibler et al | 2 | N/A | 1 | N/A | 0 | 2 | 2 | 7 |
| Anderson et al | 2 | 2 | 1 | 1 | 0 | 2 | 2 | 10 |
| Kim et al | 2 | 1 | 0 | 1 | 0 | 2 | 1 | 7 |
| Jorde et al | 2 | 2 | 1 | 2 | 0 | 2 | 2 | 11 |
| Masvidal et al | 2 | N/A | 1 | N/A | 0 | 2 | 1 | 6 |
| Mahmoudi et al | 2 | 2 | 1 | 2 | 0 | 2 | 2 | 10 |
| Li et al | 2 | 1 | 1 | 2 | 0 | 2 | 2 | 10 |
Abbreviations: HWE, Hardy–Weinberg equilibrium; N/A, not applicable.