Literature DB >> 26929216

Maturing Glycoproteomics Technologies Provide Unique Structural Insights into the N-glycoproteome and Its Regulation in Health and Disease.

Morten Thaysen-Andersen1, Nicolle H Packer2, Benjamin L Schulz3.   

Abstract

The glycoproteome remains severely understudied because of significant analytical challenges associated with glycoproteomics, the system-wide analysis of intact glycopeptides. This review introduces important structural aspects of protein N-glycosylation and summarizes the latest technological developments and applications in LC-MS/MS-based qualitative and quantitative N-glycoproteomics. These maturing technologies provide unique structural insights into the N-glycoproteome and its synthesis and regulation by complementing existing methods in glycoscience. Modern glycoproteomics is now sufficiently mature to initiate efforts to capture the molecular complexity displayed by the N-glycoproteome, opening exciting opportunities to increase our understanding of the functional roles of protein N-glycosylation in human health and disease.
© 2016 by The American Society for Biochemistry and Molecular Biology, Inc.

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Year:  2016        PMID: 26929216      PMCID: PMC5083109          DOI: 10.1074/mcp.O115.057638

Source DB:  PubMed          Journal:  Mol Cell Proteomics        ISSN: 1535-9476            Impact factor:   5.911


  182 in total

Review 1.  Applications of stable isotope dimethyl labeling in quantitative proteomics.

Authors:  Duangnapa Kovanich; Salvatore Cappadona; Reinout Raijmakers; Shabaz Mohammed; Arjen Scholten; Albert J R Heck
Journal:  Anal Bioanal Chem       Date:  2012-05-27       Impact factor: 4.142

2.  Automating mass spectrometry-based quantitative glycomics using aminoxy tandem mass tag reagents with SimGlycan.

Authors:  Ningombam Sanjib Meitei; Arun Apte; Sergei I Snovida; John C Rogers; Julian Saba
Journal:  J Proteomics       Date:  2015-05-21       Impact factor: 4.044

Review 3.  Engaging challenges in glycoproteomics: recent advances in MS-based glycopeptide analysis.

Authors:  Venkata Kolli; Katherine N Schumacher; Eric D Dodds
Journal:  Bioanalysis       Date:  2015       Impact factor: 2.681

4.  Glycopeptide enrichment using a combination of ZIC-HILIC and cotton wool for exploring the glycoproteome of wheat flour albumins.

Authors:  Plaipol Dedvisitsakul; Susanne Jacobsen; Birte Svensson; Jakob Bunkenborg; Christine Finnie; Per Hägglund
Journal:  J Proteome Res       Date:  2014-04-01       Impact factor: 4.466

Review 5.  Advances in LC-MS/MS-based glycoproteomics: getting closer to system-wide site-specific mapping of the N- and O-glycoproteome.

Authors:  Morten Thaysen-Andersen; Nicolle H Packer
Journal:  Biochim Biophys Acta       Date:  2014-05-12

6.  Synthesis of zwitterionic polymer brushes hybrid silica nanoparticles via controlled polymerization for highly efficient enrichment of glycopeptides.

Authors:  Guang Huang; Zhichao Xiong; Hongqiang Qin; Jun Zhu; Zhen Sun; Yi Zhang; Xiaojun Peng; Junjie ou; Hanfa Zou
Journal:  Anal Chim Acta       Date:  2013-12-01       Impact factor: 6.558

7.  Glycoproteomic comparison of clinical triple-negative and luminal breast tumors.

Authors:  Jennifer J Hill; Tammy-Lynn Tremblay; François Fauteux; Jie Li; Edwin Wang; Adriana Aguilar-Mahecha; Mark Basik; Maureen O'Connor-McCourt
Journal:  J Proteome Res       Date:  2015-02-16       Impact factor: 4.466

Review 8.  A review of methods for interpretation of glycopeptide tandem mass spectral data.

Authors:  Han Hu; Kshitij Khatri; Joshua Klein; Nancy Leymarie; Joseph Zaia
Journal:  Glycoconj J       Date:  2015-11-26       Impact factor: 2.916

9.  Comprehensive N-glycome profiling of cultured human epithelial breast cells identifies unique secretome N-glycosylation signatures enabling tumorigenic subtype classification.

Authors:  Ling Y Lee; Morten Thaysen-Andersen; Mark S Baker; Nicolle H Packer; William S Hancock; Susan Fanayan
Journal:  J Proteome Res       Date:  2014-09-11       Impact factor: 4.466

Review 10.  Emerging principles for the therapeutic exploitation of glycosylation.

Authors:  Martin Dalziel; Max Crispin; Christopher N Scanlan; Nicole Zitzmann; Raymond A Dwek
Journal:  Science       Date:  2014-01-03       Impact factor: 47.728

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  62 in total

1.  Sensitive and fast characterization of site-specific protein glycosylation with capillary electrophoresis coupled to mass spectrometry.

Authors:  Yanyan Qu; Liangliang Sun; Guijie Zhu; Zhenbin Zhang; Elizabeth H Peuchen; Norman J Dovichi
Journal:  Talanta       Date:  2017-10-31       Impact factor: 6.057

Review 2.  Recent Advances in the Analysis of Complex Glycoproteins.

Authors:  Stefan Gaunitz; Gabe Nagy; Nicola L B Pohl; Milos V Novotny
Journal:  Anal Chem       Date:  2016-11-23       Impact factor: 6.986

3.  Targeted Analysis of Lysosomal Directed Proteins and Their Sites of Mannose-6-phosphate Modification.

Authors:  Tomislav Čaval; Jing Zhu; Weihua Tian; Sanne Remmelzwaal; Zhang Yang; Henrik Clausen; Albert J R Heck
Journal:  Mol Cell Proteomics       Date:  2018-09-20       Impact factor: 5.911

4.  Site-specific glycosylation of the Newcastle disease virus haemagglutinin-neuraminidase.

Authors:  Cassandra L Pegg; Christine Hoogland; Jeffrey J Gorman
Journal:  Glycoconj J       Date:  2016-12-07       Impact factor: 2.916

5.  Site-specific analysis of changes in the glycosylation of proteins in liver cirrhosis using data-independent workflow with soft fragmentation.

Authors:  Miloslav Sanda; Lihua Zhang; Nathan J Edwards; Radoslav Goldman
Journal:  Anal Bioanal Chem       Date:  2016-11-07       Impact factor: 4.142

6.  Electron-Transfer/Higher-Energy Collision Dissociation (EThcD)-Enabled Intact Glycopeptide/Glycoproteome Characterization.

Authors:  Qing Yu; Bowen Wang; Zhengwei Chen; Go Urabe; Matthew S Glover; Xudong Shi; Lian-Wang Guo; K Craig Kent; Lingjun Li
Journal:  J Am Soc Mass Spectrom       Date:  2017-07-10       Impact factor: 3.109

7.  Recent advances in mass spectrometry (MS)-based glycoproteomics in complex biological samples.

Authors:  Zhengwei Chen; Junfeng Huang; Lingjun Li
Journal:  Trends Analyt Chem       Date:  2018-10-15       Impact factor: 12.296

8.  Mass spectrometric analysis of the N-glycoproteome in statin-treated liver cells with two lectin-independent chemical enrichment methods.

Authors:  Haopeng Xiao; Ju Eun Hwang; Ronghu Wu
Journal:  Int J Mass Spectrom       Date:  2017-05-27       Impact factor: 1.986

9.  Building a PGC-LC-MS N-glycan retention library and elution mapping resource.

Authors:  Jodie L Abrahams; Matthew P Campbell; Nicolle H Packer
Journal:  Glycoconj J       Date:  2017-09-13       Impact factor: 2.916

10.  Simultaneous Quantitation of Glycoprotein Degradation and Synthesis Rates by Integrating Isotope Labeling, Chemical Enrichment, and Multiplexed Proteomics.

Authors:  Haopeng Xiao; Ronghu Wu
Journal:  Anal Chem       Date:  2017-09-13       Impact factor: 6.986

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