Literature DB >> 26921696

Structure and function of the ULK1 complex in autophagy.

Mary G Lin1, James H Hurley2.   

Abstract

The ULK1 complex initiates autophagosome formation, linking cellular nutrient status to downstream events in autophagy. Recent work suggests that the ULK1 complex might also be activated in selective autophagy independent of nutrient or energy status. In this review we will discuss our current understanding of how the ULK1 complex is regulated by different signals, as well as how this complex then regulates other components of the autophagy machinery. Recently obtained structural data both on ULK1 and the orthologous yeast Atg1 complex are beginning to shed light on the higher-order organization of ULK1 complex. Ultimately, these insights might make it possible to understand how cargo organization and structure recruits and regulates ULK1 in selective autophagy initiation.
Copyright © 2016 Elsevier Ltd. All rights reserved.

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Year:  2016        PMID: 26921696      PMCID: PMC4828305          DOI: 10.1016/j.ceb.2016.02.010

Source DB:  PubMed          Journal:  Curr Opin Cell Biol        ISSN: 0955-0674            Impact factor:   8.382


  68 in total

1.  Atg13 HORMA domain recruits Atg9 vesicles during autophagosome formation.

Authors:  Sho W Suzuki; Hayashi Yamamoto; Yu Oikawa; Chika Kondo-Kakuta; Yayoi Kimura; Hisashi Hirano; Yoshinori Ohsumi
Journal:  Proc Natl Acad Sci U S A       Date:  2015-03-03       Impact factor: 11.205

2.  ULK1 translocates to mitochondria and phosphorylates FUNDC1 to regulate mitophagy.

Authors:  Wenxian Wu; Weili Tian; Zhe Hu; Guo Chen; Lei Huang; Wen Li; Xingli Zhang; Peng Xue; Changqian Zhou; Lei Liu; Yushan Zhu; Xingliang Zhang; Longxuan Li; Liangqing Zhang; Senfang Sui; Bin Zhao; Du Feng
Journal:  EMBO Rep       Date:  2014-03-26       Impact factor: 8.807

3.  Structural basis of starvation-induced assembly of the autophagy initiation complex.

Authors:  Yuko Fujioka; Sho W Suzuki; Hayashi Yamamoto; Chika Kondo-Kakuta; Yayoi Kimura; Hisashi Hirano; Rinji Akada; Fuyuhiko Inagaki; Yoshinori Ohsumi; Nobuo N Noda
Journal:  Nat Struct Mol Biol       Date:  2014-05-04       Impact factor: 15.369

Review 4.  Cargo recognition and trafficking in selective autophagy.

Authors:  Alexandra Stolz; Andreas Ernst; Ivan Dikic
Journal:  Nat Cell Biol       Date:  2014-06       Impact factor: 28.824

5.  ATG8 family proteins act as scaffolds for assembly of the ULK complex: sequence requirements for LC3-interacting region (LIR) motifs.

Authors:  Endalkachew Ashenafi Alemu; Trond Lamark; Knut Martin Torgersen; Aasa Birna Birgisdottir; Kenneth Bowitz Larsen; Ashish Jain; Hallvard Olsvik; Aud Øvervatn; Vladimir Kirkin; Terje Johansen
Journal:  J Biol Chem       Date:  2012-10-05       Impact factor: 5.157

6.  Architecture of the Atg17 complex as a scaffold for autophagosome biogenesis.

Authors:  Michael J Ragusa; Robin E Stanley; James H Hurley
Journal:  Cell       Date:  2012-12-06       Impact factor: 41.582

7.  Proteotoxic stress induces phosphorylation of p62/SQSTM1 by ULK1 to regulate selective autophagic clearance of protein aggregates.

Authors:  Junghyun Lim; M Lenard Lachenmayer; Shuai Wu; Wenchao Liu; Mondira Kundu; Rong Wang; Masaaki Komatsu; Young J Oh; Yanxiang Zhao; Zhenyu Yue
Journal:  PLoS Genet       Date:  2015-02-27       Impact factor: 5.917

8.  Structure of the human autophagy initiating kinase ULK1 in complex with potent inhibitors.

Authors:  Michael B Lazarus; Chris J Novotny; Kevan M Shokat
Journal:  ACS Chem Biol       Date:  2015-01-06       Impact factor: 5.100

9.  Architecture and dynamics of the autophagic phosphatidylinositol 3-kinase complex.

Authors:  Sulochanadevi Baskaran; Lars-Anders Carlson; Goran Stjepanovic; Lindsey N Young; Do Jin Kim; Patricia Grob; Robin E Stanley; Eva Nogales; James H Hurley
Journal:  Elife       Date:  2014-12-09       Impact factor: 8.140

10.  Huntingtin functions as a scaffold for selective macroautophagy.

Authors:  Yan-Ning Rui; Zhen Xu; Bindi Patel; Zhihua Chen; Dongsheng Chen; Antonio Tito; Gabriela David; Yamin Sun; Erin F Stimming; Hugo J Bellen; Ana Maria Cuervo; Sheng Zhang
Journal:  Nat Cell Biol       Date:  2015-02-16       Impact factor: 28.824

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  82 in total

1.  MAPK15 is part of the ULK complex and controls its activity to regulate early phases of the autophagic process.

Authors:  David Colecchia; Francesca Dapporto; Serena Tronnolone; Laura Salvini; Mario Chiariello
Journal:  J Biol Chem       Date:  2018-08-21       Impact factor: 5.157

Review 2.  Phospholipids in Autophagosome Formation and Fusion.

Authors:  Sascha Martens; Shuhei Nakamura; Tamotsu Yoshimori
Journal:  J Mol Biol       Date:  2016-10-27       Impact factor: 5.469

3.  Architecture of the ATG2B-WDR45 complex and an aromatic Y/HF motif crucial for complex formation.

Authors:  Jing-Xiang Zheng; Yan Li; Yue-He Ding; Jun-Jie Liu; Mei-Jun Zhang; Meng-Qiu Dong; Hong-Wei Wang; Li Yu
Journal:  Autophagy       Date:  2017-09-13       Impact factor: 16.016

4.  Yorkie Growth-Promoting Activity Is Limited by Atg1-Mediated Phosphorylation.

Authors:  Lauren K Tyra; Nilay Nandi; Charles Tracy; Helmut Krämer
Journal:  Dev Cell       Date:  2020-02-06       Impact factor: 12.270

Review 5.  Emerging Roles for the Lysosome in Lipid Metabolism.

Authors:  Ashley M Thelen; Roberto Zoncu
Journal:  Trends Cell Biol       Date:  2017-08-30       Impact factor: 20.808

6.  Lys05 - A Promising Autophagy Inhibitor in the Radiosensitization Battle: Phosphoproteomic Perspective.

Authors:  Martin Ondrej; Lucie Cechakova; Ivo Fabrik; Jana Klimentova; Ales Tichy
Journal:  Cancer Genomics Proteomics       Date:  2020 Jul-Aug       Impact factor: 4.069

Review 7.  The Role of Autophagy in the Resistance to BRAF Inhibition in BRAF-Mutated Melanoma.

Authors:  Xiao Liu; Jinfeng Wu; Haihong Qin; Jinhua Xu
Journal:  Target Oncol       Date:  2018-08       Impact factor: 4.493

Review 8.  Next-generation electron microscopy in autophagy research.

Authors:  James H Hurley; Eva Nogales
Journal:  Curr Opin Struct Biol       Date:  2016-09-08       Impact factor: 6.809

9.  The C-terminal region of ATG101 bridges ULK1 and PtdIns3K complex in autophagy initiation.

Authors:  Byeong-Won Kim; Yunjung Jin; Jiyea Kim; Jun Hoe Kim; Juneyoung Jung; Seongman Kang; Ick Young Kim; Joungmok Kim; Heesun Cheong; Hyun Kyu Song
Journal:  Autophagy       Date:  2018-08-16       Impact factor: 16.016

10.  Reciprocity in ROS and autophagic signaling.

Authors:  Daric J Wible; Shawn B Bratton
Journal:  Curr Opin Toxicol       Date:  2017-10-12
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