Literature DB >> 26920709

A six-year descriptive epidemiological study of human coronavirus infections in hospitalized patients in Hong Kong.

Cyril C Y Yip1, Carol S F Lam1, Hayes K H Luk1, Emily Y M Wong1, Rodney A Lee2, Lok-Yee So3, Kwok-Hung Chan1, Vincent C C Cheng1, Kwok-Yung Yuen1,4,5, Patrick C Y Woo6,7,8, Susanna K P Lau9,10,11.   

Abstract

We conducted a six-year epidemiological study on human coronaviruses (HCoVs) circulating in Hong Kong, using 8275 nasopharyngeal samples from patients with acute respiratory tract infections. HCoVs were detected in 77 (0.93%) of the samples by a pan-HCoV RT-PCR assay. The most frequently detected HCoV species was HCoV-OC43 (0.58%), followed by HCoV-229E (0.15%), HCoV-HKU1 (0.13%) and HCoV-NL63 (0.07%). HCoVs were detected throughout the study period (September 2008-August 2014), with the highest detection rate from September 2010 to August 2011 (22/1500, 1.47%). Different seasonal patterns of each HCoV species in Hong Kong were noted. HCoV-OC43 was predominant in the fall and winter, whereas HCoV-HKU1 showed peak activity in winter, with a few cases occurred in spring and summer. HCoV-229E mainly occurred in winter and spring, while HCoV-NL63 was predominant in summer and autumn. HCoVs most commonly infect the elderly and young children, with median age of 79.5 years (range, 22 days to 95 years). Intriguingly, the detection rate of HCoV-OC43 in the age group of > 80 years (26/2380, 1.09%) was significantly higher than that in the age group of 0-10 years (12/2529, 0.47%) (P < 0.05). These data provides new insight into the epidemiology of coronaviruses.

Entities:  

Keywords:  epidemiology; human coronaviruses; respiratory tract infections

Mesh:

Year:  2016        PMID: 26920709      PMCID: PMC7090542          DOI: 10.1007/s12250-016-3714-8

Source DB:  PubMed          Journal:  Virol Sin        ISSN: 1995-820X            Impact factor:   4.327


  45 in total

1.  Coronavirus HKU1 and other coronavirus infections in Hong Kong.

Authors:  Susanna K P Lau; Patrick C Y Woo; Cyril C Y Yip; Herman Tse; Hoi-wah Tsoi; Vincent C C Cheng; Paul Lee; Bone S F Tang; Chris H Y Cheung; Rodney A Lee; Lok-yee So; Yu-lung Lau; Kwok-hung Chan; Kwok-yung Yuen
Journal:  J Clin Microbiol       Date:  2006-06       Impact factor: 5.948

2.  Development of one-step, real-time, quantitative reverse transcriptase PCR assays for absolute quantitation of human coronaviruses OC43 and 229E.

Authors:  Leen Vijgen; Els Keyaerts; Elien Moës; Piet Maes; Griet Duson; Marc Van Ranst
Journal:  J Clin Microbiol       Date:  2005-11       Impact factor: 5.948

3.  More and More Coronaviruses: Human Coronavirus HKU1.

Authors:  Patrick C Y Woo; Susanna K P Lau; Cyril C Y Yip; Yi Huang; Kwok-Yung Yuen
Journal:  Viruses       Date:  2009-06-11       Impact factor: 5.818

4.  Epidemiology of acute respiratory infections in children in Guangzhou: a three-year study.

Authors:  Wen Kuan Liu; Qian Liu; De Hui Chen; Huan Xi Liang; Xiao Kai Chen; Mei Xin Chen; Shu Yan Qiu; Zi Yeng Yang; Rong Zhou
Journal:  PLoS One       Date:  2014-05-05       Impact factor: 3.240

5.  An outbreak of coronavirus OC43 respiratory infection in Normandy, France.

Authors:  Astrid Vabret; Thomas Mourez; Stéphanie Gouarin; Joëlle Petitjean; François Freymuth
Journal:  Clin Infect Dis       Date:  2003-04-04       Impact factor: 9.079

6.  Human coronavirus NL63 infection in Canada.

Authors:  Nathalie Bastien; Kelly Anderson; Laura Hart; Paul Van Caeseele; Ken Brandt; Doug Milley; Todd Hatchette; Elise C Weiss; Yan Li
Journal:  J Infect Dis       Date:  2005-01-04       Impact factor: 5.226

7.  A newly discovered human pneumovirus isolated from young children with respiratory tract disease.

Authors:  B G van den Hoogen; J C de Jong; J Groen; T Kuiken; R de Groot; R A Fouchier; A D Osterhaus
Journal:  Nat Med       Date:  2001-06       Impact factor: 53.440

8.  Detection of viruses identified recently in children with acute wheezing.

Authors:  Ju-Young Chung; Tae Hee Han; Sang Woo Kim; Chang Keun Kim; Eung-Soo Hwang
Journal:  J Med Virol       Date:  2007-08       Impact factor: 2.327

9.  Two-year prospective study of single infections and co-infections by respiratory syncytial virus and viruses identified recently in infants with acute respiratory disease.

Authors:  Filippo Canducci; Maurizia Debiaggi; Michela Sampaolo; Maria Chiara Marinozzi; Stefano Berrè; Cristina Terulla; Gianluigi Gargantini; Patrizia Cambieri; Egidio Romero; Massimo Clementi
Journal:  J Med Virol       Date:  2008-04       Impact factor: 2.327

10.  Molecular epidemiology and disease severity of respiratory syncytial virus in relation to other potential pathogens in children hospitalized with acute respiratory infection in Jordan.

Authors:  Nasser M Kaplan; Winifred Dove; Sawsan A Abd-Eldayem; Ahmad F Abu-Zeid; Hiyam E Shamoon; C Anthony Hart
Journal:  J Med Virol       Date:  2008-01       Impact factor: 2.327

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  14 in total

1.  Coronavirus: epidemiology, genome replication and the interactions with their hosts.

Authors:  Zheng-Li Shi; Deyin Guo; Peter J M Rottier
Journal:  Virol Sin       Date:  2016-02       Impact factor: 4.327

2.  Isolation of Coronavirus NL63 from Blood from Children in Rural Haiti: Phylogenetic Similarities with Recent Isolates from Malaysia.

Authors:  Valery Madsen Beau De Rochars; John Lednicky; Sarah White; Julia Loeb; Maha A Elbadry; Taina Telisma; Sonese Chavannes; Marie Gina Anilis; Eleonora Cella; Massimo Ciccozzi; Bernard A Okech; Marco Salemi; J Glenn Morris
Journal:  Am J Trop Med Hyg       Date:  2016-10-31       Impact factor: 2.345

3.  Clinical and virological factors associated with gastrointestinal symptoms in patients with acute respiratory infection: a two-year prospective study in general practice medicine.

Authors:  Laetitia Minodier; Shirley Masse; Lisandru Capai; Thierry Blanchon; Pierre-Emmanuel Ceccaldi; Sylvie van der Werf; Thomas Hanslik; Remi Charrel; Alessandra Falchi
Journal:  BMC Infect Dis       Date:  2017-11-22       Impact factor: 3.090

Review 4.  Bat Coronaviruses in China.

Authors:  Yi Fan; Kai Zhao; Zheng-Li Shi; Peng Zhou
Journal:  Viruses       Date:  2019-03-02       Impact factor: 5.048

5.  Development of a Novel, Genome Subtraction-Derived, SARS-CoV-2-Specific COVID-19-nsp2 Real-Time RT-PCR Assay and Its Evaluation Using Clinical Specimens.

Authors:  Cyril Chik-Yan Yip; Chi-Chun Ho; Jasper Fuk-Woo Chan; Kelvin Kai-Wang To; Helen Shuk-Ying Chan; Sally Cheuk-Ying Wong; Kit-Hang Leung; Agnes Yim-Fong Fung; Anthony Chin-Ki Ng; Zijiao Zou; Anthony Raymond Tam; Tom Wai-Hin Chung; Kwok-Hung Chan; Ivan Fan-Ngai Hung; Vincent Chi-Chung Cheng; Owen Tak-Yin Tsang; Stephen Kwok Wing Tsui; Kwok-Yung Yuen
Journal:  Int J Mol Sci       Date:  2020-04-08       Impact factor: 5.923

6.  Escalating infection control response to the rapidly evolving epidemiology of the coronavirus disease 2019 (COVID-19) due to SARS-CoV-2 in Hong Kong.

Authors:  Vincent C C Cheng; Shuk-Ching Wong; Jonathan H K Chen; Cyril C Y Yip; Vivien W M Chuang; Owen T Y Tsang; Siddharth Sridhar; Jasper F W Chan; Pak-Leung Ho; Kwok-Yung Yuen
Journal:  Infect Control Hosp Epidemiol       Date:  2020-03-05       Impact factor: 3.254

7.  Epidemiology characteristics of human coronaviruses in patients with respiratory infection symptoms and phylogenetic analysis of HCoV-OC43 during 2010-2015 in Guangzhou.

Authors:  Su-Fen Zhang; Jiu-Ling Tuo; Xu-Bin Huang; Xun Zhu; Ding-Mei Zhang; Kai Zhou; Lei Yuan; Hong-Jiao Luo; Bo-Jian Zheng; Kwok-Yung Yuen; Meng-Feng Li; Kai-Yuan Cao; Lin Xu
Journal:  PLoS One       Date:  2018-01-29       Impact factor: 3.240

8.  Epidemiology and clinical characteristics of human coronaviruses OC43, 229E, NL63, and HKU1: a study of hospitalized children with acute respiratory tract infection in Guangzhou, China.

Authors:  Zhi-Qi Zeng; De-Hui Chen; Wei-Ping Tan; Shu-Yan Qiu; Duo Xu; Huan-Xi Liang; Mei-Xin Chen; Xiao Li; Zheng-Shi Lin; Wen-Kuan Liu; Rong Zhou
Journal:  Eur J Clin Microbiol Infect Dis       Date:  2017-12-06       Impact factor: 3.267

Review 9.  Weathering the pandemic: How the Caribbean Basin can use viral and environmental patterns to predict, prepare, and respond to COVID-19.

Authors:  David E de Ángel Solá; Leyao Wang; Marietta Vázquez; Pablo A Méndez-Lázaro
Journal:  J Med Virol       Date:  2020-06-02       Impact factor: 20.693

10.  Preparedness and proactive infection control measures against the emerging novel coronavirus in China.

Authors:  V C C Cheng; S-C Wong; K K W To; P L Ho; K-Y Yuen
Journal:  J Hosp Infect       Date:  2020-01-18       Impact factor: 3.926

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