| Literature DB >> 26920363 |
Liping Tong1, Cole Erdmann2, Marina Daldalian3, Jing Li4, Tina Esposito5.
Abstract
BACKGROUND: This paper explores the importance of electronic medical records (EMR) for predicting 30-day all-cause non-elective readmission risk of patients and presents a comparison of prediction performance of commonly used methods.Entities:
Mesh:
Year: 2016 PMID: 26920363 PMCID: PMC4769572 DOI: 10.1186/s12874-016-0128-0
Source DB: PubMed Journal: BMC Med Res Methodol ISSN: 1471-2288 Impact factor: 4.615
An example to display the definition of index admissions and readmissions
| Patient ID | Encounter ID | Admission date | Discharge date | Elective | Index admission | Readmission | Followed by readmission |
|---|---|---|---|---|---|---|---|
| 1 | 1 | 2/25/2011 | 3/2/2011 | N | Y | - | N |
| 1 | 2 | 3/25/2011 | 3/29/2011 | Y | Y | N | Y |
| 1 | 3 | 4/10/2011 | 4/13/2011 | N | Y | Y | N |
| 1 | 4 | 7/22/2012 | 7/28/2012 | N | Y | N | Y |
| 1 | 5 | 8/15/2012 | 8/20/2012 | N | N | Y | - |
Means and 95 % confidence intervals of AUCs (%) for four readmission risk modelling approaches
| Fitting | Validating | |||
|---|---|---|---|---|
| Mean | 95 % CI | Mean | 95 % CI | |
| Fitting/validating data ~ 2,500 | ||||
| LACE | 65.3 | (63.0, 67.5) | 65.1 | (62.8, 67.3) |
| STEPWISE | 73.3 | (70.3, 76.3) | 68.6 | (65.7, 71.6) |
| LASSO | 75.1 | (71.0, 79.1) | 70.3 | (68.0, 72.7) |
| AdaBoost | 82.9 | (81.0, 84.8) | 67.6 | (65.0, 70.3) |
| Fitting/validating data ~ 5,000 | ||||
| LACE | 64.7 | (63.1, 66.3) | 64.6 | (62.9, 66.2) |
| STEPWISE | 72.3 | (70.5, 74.2) | 69.0 | (67.4, 70.5) |
| LASSO | 73.9 | (71.4, 76.3) | 70.3 | (69.0, 71.7) |
| AdaBoost | 77.9 | (76.8, 79.1) | 69.4 | (67.8, 70.9) |
| Fitting/validating data ~ 20,000 | ||||
| LACE | 65.2 | (64.5, 66.0) | 65.3 | (64.5, 66.0) |
| STEPWISE | 74.2 | (73.4, 75.1) | 73.2 | (72.4, 74.0) |
| LASSO | 74.9 | (74.0, 75.7) | 73.5 | (72.8, 74.3) |
| AdaBoost | 75.5 | (74.7, 76.2) | 73.5 | (72.8, 74.3) |
| Fitting/validating data ~ 80,000 | ||||
| LACE | 65.6 | (65.2, 65.9) | 65.5 | (65.2, 65.9) |
| STEPWISE | 74.0 | (73.6, 74.4) | 73.4 | (73.0, 73.9) |
| LASSO | 74.3 | (73.9, 74.7) | 73.7 | (73.3, 74.1) |
| AdaBoost | 74.2 | (73.9, 74.6) | 73.7 | (73.3, 74.1) |
In STEPWISE, the threshold for entry and removal is p = 0.01. In LASSO, λ = λmin
Comparison of the selected set of predictors
| df for models, mean (std) | df for variables selected at least 95 % of the time | Average AUC on validating data (%) | |
|---|---|---|---|
| LACE | 4 (0) | 4 | 65.54 |
| STEPWISE ( | 67 (4) | 32 | 73.43 |
| STEPWISE ( | 112 (11) | 35 | 73.52 |
| LASSO (λ = λmin) | 190 (16) | 72 | 73.70 |
| LASSO (λ = λ1sd) | 105 (10) | 56 | 73.61 |
| AdaBoost | 157 (5) | 63 | 73.69 |
Characteristics of 162,466 index admissions
| Overall index admissions | Index admissions by the value of 30-day all-cause non-elective readmission | |||||
|---|---|---|---|---|---|---|
| The total degrees of freedom = 24 | No (88.5 %) | Yes (11.5 %) | ||||
| No. or Mean | % or Std. | No. or Mean | % or Std. | No. or Mean | % or Std. | |
| Variables in LACE model | ||||||
| 1. Length of Stay (L) | 4.8 | 4.5 | 4.6 | 4.4 | 5.8 | 5.3 |
| 2. Acuity (A) | 123,426 | 76.0 | 107,288 | 74.6 | 16,138 | 86.3 |
| 3. Charlson Comorbidity Index (C) | 2.0 | 2.4 | 1.9 | 2.4 | 2.8 | 2.8 |
| 4. ER encounters in Last Six Months (E) | 33,166 | 20.4 | 27,368 | 19.0 | 5798 | 31.0 |
| Additional variables from EMR | ||||||
| 5. Number of ER encounters in Last Year | 0.6 | 2.0 | 0.5 | 1.5 | 1.1 | 4.1 |
| Index admissions with this value > 0 | 45,037 | 27.2 | 37,532 | 26.1 | 7505 | 40.1 |
| 6. Number of Inpatient encounters in Last Year | 1.0 | 1.8 | 0.8 | 1.6 | 2.1 | 2.9 |
| Index admissions with this value > 0 | 64,742 | 39.9 | 52,998 | 36.9 | 11,744 | 62.8 |
| 7. Braden Score | 18.6 | 3.3 | 18.7 | 3.2 | 17.9 | 3.4 |
| 8. Polypharmacy | 6.1 | 5.8 | 5.9 | 5.6 | 7.2 | 6.5 |
| 9. Inpatient encounters in Last 6 Months | 51,797 | 31.9 | 41,540 | 28.9 | 10,257 | 54.8 |
| 10. Employment Status | ||||||
| Employed | 22,007 | 13.6 | 20,398 | 14.2 | 1609 | 8.6 |
| Not Employed | 83,231 | 51.2 | 71,607 | 49.8 | 11,624 | 62.1 |
| Unknown | 57,228 | 35.2 | 51,754 | 36.0 | 5474 | 29.3 |
| 11. Discharge Disposition | ||||||
| Home/Self care | 89,620 | 55.2 | 81,757 | 56.9 | 7863 | 42.3 |
| Home Care | 26,913 | 16.6 | 22,669 | 15.8 | 4244 | 22.7 |
| SNF | 29,598 | 18.2 | 24,714 | 17.2 | 4884 | 26.1 |
| Rehab | 4155 | 2.6 | 3780 | 2.6 | 375 | 2.0 |
| LTC, Federal Hospital | 9734 | 6.0 | 8823 | 6.1 | 911 | 4.9 |
| 12. Against Medical Advice (AMA) | 2163 | 1.3 | 1760 | 1.2 | 403 | 2.2 |
| 13. Albumin Level | ||||||
| < 3.4 g/dL | 54,161 | 33.3 | 45,778 | 31.8 | 8383 | 44.8 |
| > = 3.4 g/dL (normal range) | 34,077 | 21.0 | 30,744 | 21.4 | 3333 | 17.8 |
| Unknown | 74,228 | 45.7 | 67,237 | 46.8 | 6991 | 37.4 |
| 14. Leukemia_LMM | 3576 | 2.2 | 2940 | 2.1 | 636 | 3.4 |
| 15. Malignancy | 17,384 | 10.7 | 14,471 | 10.1 | 2913 | 15.6 |
| 16. RF with Hemo | 42,844 | 26.4 | 35,458 | 24.7 | 7386 | 39.5 |
| 17. History of Alcohol Substance Abuse | 11,374 | 7.0 | 9686 | 6.7 | 1688 | 9.0 |
| 18. Dementia | 5362 | 3.3 | 4688 | 3.3 | 674 | 3.6 |
| 19. Trauma | 25,241 | 15.5 | 22,340 | 15.5 | 2901 | 15.5 |
The independent variables were those being selected at least 95 % of the time in the three models: STEPWISE, LASSO and AdaBoost when the sample size of fitting data was around 80,000
Fig. 1Comparison of AUCs for various choices of threshold (of p-value) for entry and removal in the stepwise variable selection procedure