| Literature DB >> 26918339 |
Xuan Su1, Zhaoqu Li1, Caiyun He2, Weichao Chen1, Xiaoyan Fu1, Ankui Yang1.
Abstract
BACKGROUND: RET/PTC rearrangements have been identified as a specific genetic event in papillary thyroid cancer (PTC). We conducted this meta-analysis to identify an enriched population who were more likely to occur RET/PTC fusion genes.Entities:
Keywords: RET/PTC; biomarker; papillary thyroid cancer; radiation
Mesh:
Substances:
Year: 2016 PMID: 26918339 PMCID: PMC4941346 DOI: 10.18632/oncotarget.7574
Source DB: PubMed Journal: Oncotarget ISSN: 1949-2553
Figure 1Flowchart of literature search and selection of studies
Characteristics of studies included in the meta-analysis
| First author | Year of publication | Ethnicity | Region | Method of detection | Radiation | No.of patients |
|---|---|---|---|---|---|---|
| Nikiforov et al | 1997 | Belarussian, Los Angeles, Cincinnati | Western | RT-PCR | Mixed | 55 |
| Bounacer et al | 1997 | French | Western | RT-PCR | Mixed | 39 |
| Motomura et al | 1998 | Japanese | Asian | RT-PCR | Non-radiation | 21 |
| Smida et al | 1999 | Belarussian, German | Western | RT-PCR | Mixed | 83 |
| Rabes et al | 2000 | Belarus, Russia, Ukrainian | Western | PCR | Radiation | 191 |
| Elisei et al | 2001 | Belarus, Itaian | Western | PCR | Mixed | 89 |
| Puxeddu et al | 2003 | Italian | Western | RT-PCR, Southern Blot | Non-radiation | 48 |
| Rhoden et al | 2004 | American | Western | RT-PCR | NM | 25 |
| Nakazawa et al | 2005 | Japanese | Asian | RT-PCR | Non-radiation | 169 |
| Brzezianska et al | 2006 | Polish | Western | RT-PCR | NM | 33 |
| Hamatani et al | 2008 | Japanese | Asian | RT-PCR | Mixed | 71 |
| Tuttle et al | 2008 | Russian | Western | RT-PCR | Radiation | 76 |
| Lam et al | 2002 | China, Hong Kong | Asian | RT-PCR | Non-radiation | 21 |
| Detours et al | 2005 | Ukrainian | Western | RT-PCR | Mixed | 20 |
| Lima et al | 2004 | Ukrainian | Western | RT-PCR | Mixed | 34 |
| Penko et al | 2005 | American | Western | PCR | Mixed | 13 |
| Romei et al | 2008 | Italian | Western | RT-PCR | Non-radiation | 70 |
| Hieber et al | 2011 | Ukrainian | Western | FISH | Radiation | 22 |
| Guerra et al | 2014 | Italian | Western | RT-PCR | NM | 72 |
| Zou et al | 2014 | Saudi Arabian | Asian | RT-PCR | NM | 88 |
| Chung et al | 1999 | Korean | Asian | RT-PCR | Non-radiation | 31 |
| Powell et al | 2005 | Ukrainian | Western | PCR | Mixed | 35 |
| Unger et al | 2004 | Ukrainian | Western | FISH | Radiation | 29 |
| Wang et al | 2008 | Chinese | Asian | RT-PCR | Non-radiation | 126 |
| Nikiforova et al | 2004 | Belorussian, Ukrainian | Western | PCR | Mixed | 137 |
| Basolo et al | 2002 | Italian | Western | RT-PCR | NM | 91 |
| Rao et al | 2014 | Indian | Asian | RT-PCR | Non-radiation | 30 |
| Collins et al | 2002 | American | Western | IHC | Mixed | 64 |
| Chung et al | 2004 | Korean | Asian | RT-PCR+IHC | Non-radiation | 22 |
| Unger et al | 2006 | Ukrainian | Western | FISH | Radiation | 13 |
| Sadetzki et al | 2004 | Israelis | Asian | RT-PCR | Mixed | 49 |
| Smyth et al | 2005 | Irish | Western | Taqman | NM | 34 |
| Learoyd et al | 1998 | Australian, Swedish | Western | RT-PCR | Mixed | 50 |
| Nakazawa et al | 2009 | Japanese | Asian | FISH+RT-PCR | Non-radiation | 14 |
| Di Cristofaro et al | 2005 | Ukrainian, French | Western | RT-PCR | Mixed | 50 |
| Erdogan | 2008 | Turkish | Asian | RT-PCR | Non-radiation | 101 |
| Fenton et al | 2000 | American | Western | PCR | Non-radiation | 33 |
| Guerra et al | 2011 | Italian | Western | RT-PCR | NM | 50 |
| Stanojevic et al | 2011 | Serbian | Western | PCR | Non-radiation | 266 |
Positive rates of RET/PTC1 and RET/PTC3 in each original study
| First author | Year of publication | No. of PTC cases | Freq. of RET/PTC1 and 3 | RET/PTC1 and 3(%) | Freq. of RET/PTC1 | RET/PTC1(%) | Freq. of RET/PTC3 | RET/PTC3(%) |
|---|---|---|---|---|---|---|---|---|
|
| ||||||||
| Motomura et al | 1998 | 21 | 7 | 33.33% | 5 | 23.81% | 2 | 9.52% |
| Nakazawa et al | 2005 | 169 | 48 | 28.40% | 43 | 25.44% | 8 | 4.73% |
| Hamatani et al | 2008 | 71 | 12 | 16.90% | ||||
| Lam et al | 2002 | 21 | 18 | 85.71% | 18 | 85.71% | ||
| Zou et al | 2014 | 88 | 12 | 13.64% | 12 | 13.64% | ||
| Chung et al | 1999 | 31 | 4 | 12.90% | ||||
| Wang et al | 2008 | 126 | 18 | 14.29% | ||||
| Rao et al | 2014 | 30 | 26 | 86.67% | 0 | 0.00% | 26 | 86.67% |
| Chung et al | 2004 | 22 | 2 | 9.09% | 1 | 4.55% | 1 | 4.55% |
| Sadetzki et al | 2004 | 49 | 22 | 44.90% | 20 | 40.82% | 0 | 0.00% |
| Nakazawa et al | 2009 | 14 | 4 | 28.57% | 4 | 28.57% | 0 | 0.00% |
| Erdogan | 2008 | 101 | 67 | 66.34% | 32 | 31.68% | 21 | 20.79% |
| Nikiforov et al | 1997 | 55 | 40 | 72.73% | 14 | 25.45% | 25 | 45.45% |
| Bounacer et al | 1997 | 39 | 18 | 46.15% | 15 | 38.46% | 5 | 12.82% |
| Smida et al | 1999 | 83 | 39 | 46.99% | 26 | 31.33% | 13 | 15.66% |
| Rabes et al | 2000 | 191 | 86 | 45.03% | 48 | 25.13% | 38 | 19.90% |
| Elisei et al | 2001 | 89 | 40 | 44.94% | 18 | 20.22% | 26 | 29.21% |
| Puxeddu et al | 2003 | 48 | 13 | 27.08% | 8 | 16.67% | 5 | 10.42% |
| Rhoden et al | 2004 | 25 | 18 | 72.00% | 18 | 72.00% | 5 | 20.00% |
| Brzezianska et al | 2006 | 33 | 7 | 21.21% | ||||
| Tuttle et al | 2008 | 76 | 13 | 17.11% | 11 | 14.47% | 5 | 6.58% |
| Detours et al | 2005 | 20 | 7 | 35.00% | 1 | 5.00% | 2 | 10.00% |
| Lima et al | 2004 | 34 | 14 | 41.18% | ||||
| Penko et al | 2005 | 13 | 7 | 53.85% | 5 | 38.46% | 2 | 15.38% |
| Romei et al | 2008 | 13 | 18.57% | 12 | 17.14% | |||
| Hieber et al | 2011 | 22 | 17 | 77.27% | ||||
| Guerra et al | 2014 | 72 | 12 | 16.67% | ||||
| Powell et al | 2005 | 35 | 16 | 45.71% | ||||
| Unger et al | 2004 | 29 | 5 | 17.24% | 2 | 6.90% | 3 | 10.34% |
| Nikiforova et al | 2004 | 137 | 48 | 35.04% | 16 | 11.68% | 32 | 23.36% |
| Basolo et al | 2002 | 91 | 28 | 30.77% | 6 | 6.59% | 22 | 24.18% |
| Collins et al | 2002 | 64 | 44 | 68.75% | ||||
| Unger et al | 2006 | 13 | 10 | 76.92% | ||||
| Smyth et al | 2005 | 34 | 13 | 38.24% | 10 | 29.41% | 3 | 8.82% |
| Learoyd et al | 1998 | 50 | 4 | 8.00% | 4 | 8.00% | 0 | 0.00% |
| Di Cristofaro et al | 2005 | 50 | 30 | 60.00% | 26 | 52.00% | 13 | 26.00% |
| Fenton et al | 2000 | 33 | 14 | 42.42% | 11 | 33.33% | 3 | 9.09% |
| Guerra et al | 2011 | 50 | 18 | 36.00% | ||||
| Stanojevic et al | 2011 | 266 | 55 | 20.68% | 42 | 15.79% | 13 | 4.89% |
Meta-analysis results for association between RET/PTC fusion genes and radiation exposure in patients with PTC
| Radiation exposure vs. non-radiation exposure | No. of studies | No. of cases/controls | OR(95%CI) | P value | Model | I2 | Phet |
|---|---|---|---|---|---|---|---|
| All | 14 | 537/388 | Random | 74% | <0.001 | ||
| Region | |||||||
| Asian | 4 | 232/71 | 0.88(0.26,2.93) | 0.833 | Random | 56% | 0.077 |
| Western | 10 | 305/317 | Random | 59% | <0.001 | ||
| All | 9 | 285/287 | 1.86(0.66, 5.28) | 0.243 | Random | 76.00% | <0.001 |
| Region | |||||||
| Asian | 1 | 37/12 | 0.24(0.06,0.96) | 0.043 | Random | / | / |
| Western | 8 | 248/275 | 2.46(0.83,7.27) | 0.104 | Random | 74.10% | <0.001 |
| All | 8 | 243/240 | Fixed | 0.00% | 0.980 | ||
| Region | |||||||
| Asian | / | / | / | / | / | / | / |
| Western | 8 | 243/240 | Fixed | 0.00% | 0.980 |
P-value for heterogeneity test;
Data from Sadetzki et al. [21] and Learoyd et al. [6] showed that the RET/PTC3 gene prevalence was 100% in both the groups with and without radiation exposure and that the OR and standard error could not be estimated; therefore, these studies were excluded. The statistically significant results are highlighted in bold.
Figure 2Results of the association between RET/PTC1 and RET/PTC3 fusion genes and radiation exposure in patients with PTC
Figure 3Results of the association between RET/PTC3 fusion gene and radiation exposure in patients with PTC
Meta-analysis results for association between RET/PTC fusion genes and age in patients with PTC
| Young people vs. adult | No. of studies | No. of cases/controls | OR(95%CI) | P value | Model | I2 | Phet |
|---|---|---|---|---|---|---|---|
| All | 8 | 187/332 | 1.10(0.56,2.16) | 0.783 | Random | 51.50% | 0.044 |
| Region | |||||||
| Asian | 2 | 41/149 | 1.76(0.84,3.69) | 0.133 | Fixed | 4.30% | 0.307 |
| Western | 6 | 146/183 | 0.98(0.41,2.31) | 0.956 | Random | 54.50% | 0.052 |
| Radiation | |||||||
| Radiation exposure | 6 | 116/122 | 0.88(0.48,1.62) | 0.682 | Fixed | 41.50% | 0.129 |
| Non-radiation exposure | 5 | 71/200 | 1.46(0.81,2.65) | 0.212 | Fixed | 33.90% | 0.195 |
| All | 6 | 172/286 | 0.98(0.60,1.58) | 0.921 | Fixed | 7.20% | 0.370 |
| Region | |||||||
| Asian | 2 | 41/149 | 1.33(0.61,2.91) | 0.476 | Fixed | 0.00% | 0.466 |
| Western | 4 | 131/137 | 0.81(0.44,1.50) | 0.507 | Fixed | 21.40% | 0.282 |
| Radiation | |||||||
| Radiation exposure | 5 | 107/109 | 0.52(0.26,1.05) | 0.070 | Fixed | 49.30% | 0.096 |
| Non-radiation exposure | 5 | 71/200 | 1.47(0.76,2.86) | 0.250 | Fixed | 0.00% | 0.574 |
| All | 7 | 179/318 | Fixed | 46.70% | 0.081 | ||
| Region | |||||||
| Asian | 2 | 42/148 | 3.23(0.87,12.00) | 0.080 | Fixed | 7.20% | 0.299 |
| Western | 5 | 137/170 | 1.84(0.97,3.50) | 0.206 | Random | 50.1%% | 0.091 |
| Radiation | |||||||
| Radiation exposure | 5 | 107/109 | Fixed | 0.00% | 0.574 | ||
| Non-radiation exposure | 5 | 72/199 | 1.68(0.28,10.01) | 0.570 | Random | 67.00% | 0.028 |
P-value for heterogeneity test. The statistically significant results are highlighted in bold.
Figure 4Results of the association between RET/PTC3 fusion gene and young age in patients with PTC
Meta-analysis results for association between RET/PTC fusion genes and sex in patients with PTC
| Female vs. male | No. of studies | No. of cases/controls | OR(95%CI) | P value | Model | I2 | Phet |
|---|---|---|---|---|---|---|---|
| All | 27 | 1211/474 | 1.04(0.81,1.33) | 0.775 | Fixed | 0.00% | 0.938 |
| Region | |||||||
| Asian | 9 | 373/138 | 1.42(0.81,2.49) | 0.216 | Fixed | 0.00% | 0.754 |
| Western | 18 | 838/336 | 0.95(0.72,1.27) | 0.747 | Fixed | 0.00% | 0.934 |
| Radiation | |||||||
| Radiation exposure | 11 | 369/174 | 0.94(0.63,1.41) | 0.760 | Fixed | 0.00% | 0.941 |
| Non-radiation exposure | 17 | 721/258 | 1.28(0.90,1.82) | 0.171 | Fixed | 7.20% | 0.370 |
| All a | 16 | 832/324 | 1.21(0.87,1.69) | 0.256 | Fixed | 0.00% | 0.857 |
| Region | |||||||
| Asian | 5 | 213/62 | 0.98(0.48,2.01) | 0.962 | Fixed | 0.00% | 0.604 |
| Western | 11 | 619/261 | 1.28(0.88,1.87) | 0.193 | Fixed | 0.00% | 0.796 |
| Radiation | |||||||
| Radiation exposure | 4 | 185/104 | 1.22(0.70,2.11) | 0.482 | Fixed | 0.00% | 0.892 |
| Non-radiation exposure | 13 | 581/192 | Fixed | 0.00% | 0.768 | ||
| All,b | 17 | 785/304 | 0.87(0.60,1.27) | 0.466 | Fixed | 0.00% | 0.625 |
| Region | |||||||
| Asian | 5 | 155/40 | 1.54(0.59,3.99) | 0.378 | Fixed | 0.00% | 0.763 |
| Western | 11 | 619/261 | 0.77(0.51,1.17) | 0.223 | Fixed | 0.00% | 0.527 |
| Radiation | |||||||
| Radiation exposure | 4 | 185/104 | 0.82(0.45,1.48) | 0.504 | Fixed | 0.00% | 0.903 |
| Non-radiation exposure | 11 | 570/186 | 1.06(0.60,1.87) | 0.847 | Fixed | 0.00% | 0.696 |
P-value for heterogeneity test;
Data from Rao et al. [7] and Detours et al. [31] showed that RET/PTC1 gene prevalence was 100% in both female and male groups and that the OR and standard error could not be estimated; therefore, these studies were excluded. The statistically significant results are highlighted in bold.
Figure 5Results of the association between RET/PTC1 fusion gene and female gender in PTC patients without radiation exposure
Analysis for publication bias
| Variable | Begg's test | Egger's test | ||
|---|---|---|---|---|
| z value | P value | t value | P value | |
| Radiation exposure vs. non-radiation exposure | 0.93 | 0.352 | 1.34 | 0.205 |
| Female vs. male | 1.02 | 0.307 | 0.24 | 0.811 |
| Children and adolecent vs. adult | −0.25 | 0.805 | 0.16 | 0.882 |
| Radiation exposure vs. non-radiation exposure | 1.25 | 0.211 | 1.71 | 0.132 |
| Female vs. male | 0.27 | 0.787 | 0.15 | 0.879 |
| Children and adolecent vs. adult | −0.19 | 0.851 | 0.39 | 0.715 |
| Radiation exposure vs. non-radiation exposure | −0.56 | 0.573 | −1.75 | 0.156 |
| Female vs. male | 0.27 | 0.787 | 0.59 | 0.567 |
| Children and adolecent vs. adult | 0.45 | 0.652 | 1.92 | 0.113 |
P value>0.1 was considered as no publication bias.