Literature DB >> 26918303

Review: The lord of the rings: Structure and mechanism of the sliding clamp loader.

Brian A Kelch1.   

Abstract

Sliding clamps are ring-shaped polymerase processivity factors that act as master regulators of cellular replication by coordinating multiple functions on DNA to ensure faithful transmission of genetic and epigenetic information. Dedicated AAA+ ATPase machines called clamp loaders actively place clamps on DNA, thereby governing clamp function by controlling when and where clamps are used. Clamp loaders are also important model systems for understanding the basic principles of AAA+ mechanism and function. After nearly 30 years of study, the ATP-dependent mechanism of opening and loading of clamps is now becoming clear. Here I review the structural and mechanistic aspects of the clamp loading process, as well as comment on questions that will be addressed by future studies.
© 2016 Wiley Periodicals, Inc. Biopolymers 105: 532-546, 2016. © 2016 Wiley Periodicals, Inc.

Entities:  

Keywords:  ATPase; DNA replication; clamp loader; sliding clamp

Mesh:

Substances:

Year:  2016        PMID: 26918303     DOI: 10.1002/bip.22827

Source DB:  PubMed          Journal:  Biopolymers        ISSN: 0006-3525            Impact factor:   2.505


  29 in total

1.  Linchpin DNA-binding residues serve as go/no-go controls in the replication factor C-catalyzed clamp-loading mechanism.

Authors:  Juan Liu; Yayan Zhou; Manju M Hingorani
Journal:  J Biol Chem       Date:  2017-08-14       Impact factor: 5.157

2.  Structure of the RAD9-RAD1-HUS1 checkpoint clamp bound to RHINO sheds light on the other side of the DNA clamp.

Authors:  Kodai Hara; Nao Iida; Ryota Tamafune; Eiji Ohashi; Hitomi Sakurai; Yoshinobu Ishikawa; Asami Hishiki; Hiroshi Hashimoto
Journal:  J Biol Chem       Date:  2019-11-27       Impact factor: 5.157

3.  Sending protein aggregates into a downward spiral.

Authors:  Steven E Glynn; Peter Chien
Journal:  Nat Struct Mol Biol       Date:  2016-09-06       Impact factor: 15.369

4.  Structure of the human clamp loader reveals an autoinhibited conformation of a substrate-bound AAA+ switch.

Authors:  Christl Gaubitz; Xingchen Liu; Joseph Magrino; Nicholas P Stone; Jacob Landeck; Mark Hedglin; Brian A Kelch
Journal:  Proc Natl Acad Sci U S A       Date:  2020-09-09       Impact factor: 11.205

5.  Dynamics of the E. coli β-Clamp Dimer Interface and Its Influence on DNA Loading.

Authors:  Bilyana N Koleva; Hatice Gokcan; Alessandro A Rizzo; Socheata Lim; Kevin Jeanne Dit Fouque; Angelina Choy; Melissa L Liriano; Francisco Fernandez-Lima; Dmitry M Korzhnev; G Andrés Cisneros; Penny J Beuning
Journal:  Biophys J       Date:  2019-07-05       Impact factor: 4.033

6.  The partner-swapping sliding clamp loader exposed.

Authors:  David Jeruzalmi
Journal:  Nat Struct Mol Biol       Date:  2022-04       Impact factor: 15.369

7.  Single-molecule FRET studies of the cooperative and non-cooperative binding kinetics of the bacteriophage T4 single-stranded DNA binding protein (gp32) to ssDNA lattices at replication fork junctions.

Authors:  Wonbae Lee; John P Gillies; Davis Jose; Brett A Israels; Peter H von Hippel; Andrew H Marcus
Journal:  Nucleic Acids Res       Date:  2016-09-30       Impact factor: 16.971

8.  Molecular mechanisms of eukaryotic origin initiation, replication fork progression, and chromatin maintenance.

Authors:  Zuanning Yuan; Huilin Li
Journal:  Biochem J       Date:  2020-09-30       Impact factor: 3.857

9.  Mechanism of opening a sliding clamp.

Authors:  Lauren G Douma; Kevin K Yu; Jennifer K England; Marcia Levitus; Linda B Bloom
Journal:  Nucleic Acids Res       Date:  2017-09-29       Impact factor: 16.971

Review 10.  A structural view of the initiators for chromosome replication.

Authors:  Kin Fan On; Matt Jaremko; Bruce Stillman; Leemor Joshua-Tor
Journal:  Curr Opin Struct Biol       Date:  2018-09-12       Impact factor: 6.809

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