Literature DB >> 26916074

microRNA in situ hybridization for miR-211 detection as an ancillary test in melanoma diagnosis.

Sankhiros Babapoor1, Michael Horwich2, Rong Wu3, Shauna Levinson4, Manoj Gandhi4, Hanspaul Makkar2, Arni Kristjansson2, Mary Chang2, Soheil S Dadras1,2,5.   

Abstract

Some melanocytic tumors can be histologically ambiguous causing diagnostic difficulty, which could lead to overtreatment of benign lesions with an unwarranted psychological distress or undertreatment of malignant cancers. Previously, we demonstrated that significantly decreased miR-211 expression in melanomas compared with melanocytic nevi could accurately discriminate malignant from benign tumors. Herein we show microRNA in situ hybridization for fluorescent detection of miR-211, suitable for paraffin-embedded tissues in 109 primary melanocytic tumors. miR-211 expression was significantly lower in melanomas vs nevi (P<0.0001), and receiver operating characteristic curve (area under the curve=0.862) accurately discriminated melanomas from nevi with 90% sensitivity and 86.2% specificity. Qualitatively, all dysplastic nevi expressed miR-211 at high (86%) and low (14%) levels, independent of the degree of nuclear atypia. All 35 melanocytic tumors with Spitz morphology expressed miR-211 independent of morphological classification, where clinical follow-up of these patients showed no recurrence at the site or metastasis in mean and median of 3 (ranging 2-5) years. Moreover, a decision tree learning analysis selected age and miR-211 miRNA in situ hybridization as the predictive variables for benign or malignant outcome in 88 patients correctly classified 92% (81 out of 88) of cases as proven by receiver operating characteristic curve (area under the curve=0.9029). These results support miR-211 as a leading miRNA candidate for melanoma diagnosis and miRNA in situ hybridization as a uniquely uncomplicated ancillary test.

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Year:  2016        PMID: 26916074     DOI: 10.1038/modpathol.2016.44

Source DB:  PubMed          Journal:  Mod Pathol        ISSN: 0893-3952            Impact factor:   7.842


  19 in total

1.  Distinct sets of genetic alterations in melanoma.

Authors:  John A Curtin; Jane Fridlyand; Toshiro Kageshita; Hetal N Patel; Klaus J Busam; Heinz Kutzner; Kwang-Hyun Cho; Setsuya Aiba; Eva-Bettina Bröcker; Philip E LeBoit; Dan Pinkel; Boris C Bastian
Journal:  N Engl J Med       Date:  2005-11-17       Impact factor: 91.245

2.  Melastatin expression and prognosis in cutaneous malignant melanoma.

Authors:  L M Duncan; J Deeds; F E Cronin; M Donovan; A J Sober; M Kauffman; J J McCarthy
Journal:  J Clin Oncol       Date:  2001-01-15       Impact factor: 44.544

3.  Melanocytic tumors of uncertain malignant potential: results of a tutorial held at the XXIX Symposium of the International Society of Dermatopathology in Graz, October 2008.

Authors:  Lorenzo Cerroni; Raymond Barnhill; David Elder; Geoffrey Gottlieb; Peter Heenan; Heinz Kutzner; Philip E LeBoit; Martin Mihm; Juan Rosai; Helmut Kerl
Journal:  Am J Surg Pathol       Date:  2010-03       Impact factor: 6.394

Review 4.  Genetic variation in microRNA networks: the implications for cancer research.

Authors:  Bríd M Ryan; Ana I Robles; Curtis C Harris
Journal:  Nat Rev Cancer       Date:  2010-06       Impact factor: 60.716

5.  MicroRNA expression profiles classify human cancers.

Authors:  Jun Lu; Gad Getz; Eric A Miska; Ezequiel Alvarez-Saavedra; Justin Lamb; David Peck; Alejandro Sweet-Cordero; Benjamin L Ebert; Raymond H Mak; Adolfo A Ferrando; James R Downing; Tyler Jacks; H Robert Horvitz; Todd R Golub
Journal:  Nature       Date:  2005-06-09       Impact factor: 49.962

6.  The regulation of miRNA-211 expression and its role in melanoma cell invasiveness.

Authors:  Joseph Mazar; Katherine DeYoung; Divya Khaitan; Edward Meister; Alvin Almodovar; James Goydos; Animesh Ray; Ranjan J Perera
Journal:  PLoS One       Date:  2010-11-01       Impact factor: 3.240

7.  Profiling and discovery of novel miRNAs from formalin-fixed, paraffin-embedded melanoma and nodal specimens.

Authors:  Zhihai Ma; Weng-Onn Lui; Andrew Fire; Soheil S Dadras
Journal:  J Mol Diagn       Date:  2009-09       Impact factor: 5.568

Review 8.  Oncomirs - microRNAs with a role in cancer.

Authors:  Aurora Esquela-Kerscher; Frank J Slack
Journal:  Nat Rev Cancer       Date:  2006-04       Impact factor: 60.716

9.  Multicolor microRNA FISH effectively differentiates tumor types.

Authors:  Neil Renwick; Pavol Cekan; Paul A Masry; Sean E McGeary; Jason B Miller; Markus Hafner; Zhen Li; Aleksandra Mihailovic; Pavel Morozov; Miguel Brown; Tasos Gogakos; Mehrpouya B Mobin; Einar L Snorrason; Harriet E Feilotter; Xiao Zhang; Clifford S Perlis; Hong Wu; Mayte Suárez-Fariñas; Huichen Feng; Masahiro Shuda; Patrick S Moore; Victor A Tron; Yuan Chang; Thomas Tuschl
Journal:  J Clin Invest       Date:  2013-06       Impact factor: 14.808

10.  A novel miR-451a isomiR, associated with amelanotypic phenotype, acts as a tumor suppressor in melanoma by retarding cell migration and invasion.

Authors:  Sankhiros Babapoor; Elizabeth Fleming; Rong Wu; Soheil S Dadras
Journal:  PLoS One       Date:  2014-09-19       Impact factor: 3.240

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  19 in total

1.  Identification of microRNAs associated with invasive and aggressive phenotype in cutaneous melanoma by next-generation sequencing.

Authors:  Sankhiros Babapoor; Rong Wu; James Kozubek; Donna Auidi; Jane M Grant-Kels; Soheil S Dadras
Journal:  Lab Invest       Date:  2017-02-20       Impact factor: 5.662

2.  miRNA-211 stops the clock.

Authors:  Carmit Levy; Tamar Golan; David E Fisher
Journal:  Noncoding RNA Investig       Date:  2018-05-06

3.  BRAFV600 inhibition alters the microRNA cargo in the vesicular secretome of malignant melanoma cells.

Authors:  Taral R Lunavat; Lesley Cheng; Berglind O Einarsdottir; Roger Olofsson Bagge; Somsundar Veppil Muralidharan; Robyn A Sharples; Cecilia Lässer; Yong Song Gho; Andrew F Hill; Jonas A Nilsson; Jan Lötvall
Journal:  Proc Natl Acad Sci U S A       Date:  2017-07-06       Impact factor: 11.205

4.  MicroRNA-211 Loss Promotes Metabolic Vulnerability and BRAF Inhibitor Sensitivity in Melanoma.

Authors:  Anupama Sahoo; Sanjaya K Sahoo; Piyush Joshi; Bongyong Lee; Ranjan J Perera
Journal:  J Invest Dermatol       Date:  2018-08-01       Impact factor: 8.551

5.  Melanosomes foster a tumour niche by activating CAFs.

Authors:  Susana García-Silva; Héctor Peinado
Journal:  Nat Cell Biol       Date:  2016-08-30       Impact factor: 28.824

6.  miR-211 regulates the antioxidant function of lens epithelial cells affected by age-related cataracts.

Authors:  Bo Lu; Ian T Christensen; Li-Wei Ma; Tao Yu; Ling-Feng Jiang; Chun-Xia Wang; Li Feng; Jin-Song Zhang; Qi-Chang Yan; Xin-Ling Wang
Journal:  Int J Ophthalmol       Date:  2018-03-18       Impact factor: 1.779

7.  MicroRNA-211 Modulates the DUSP6-ERK5 Signaling Axis to Promote BRAFV600E-Driven Melanoma Growth In Vivo and BRAF/MEK Inhibitor Resistance.

Authors:  Bongyong Lee; Anupama Sahoo; Junko Sawada; John Marchica; Sanjay Sahoo; Fabiana I A L Layng; Darren Finlay; Joseph Mazar; Piyush Joshi; Masanobu Komatsu; Kristiina Vuori; Petrus R de Jong; Animesh Ray; Ranjan J Perera
Journal:  J Invest Dermatol       Date:  2020-09-02       Impact factor: 8.551

8.  Automated Five-Color Multiplex Co-detection of MicroRNA and Protein Expression in Fixed Tissue Specimens.

Authors:  Lorenzo F Sempere; Erin Zaluzec; Elizabeth Kenyon; Matti Kiupel; Anna Moore
Journal:  Methods Mol Biol       Date:  2020

Review 9.  MicroRNA Signature in Melanoma: Biomarkers and Therapeutic Targets.

Authors:  Soudeh Ghafouri-Fard; Mahdi Gholipour; Mohammad Taheri
Journal:  Front Oncol       Date:  2021-04-22       Impact factor: 6.244

10.  MicroRNA Ratios Distinguish Melanomas from Nevi.

Authors:  Rodrigo Torres; Ursula E Lang; Miroslav Hejna; Samuel J Shelton; Nancy M Joseph; A Hunter Shain; Iwei Yeh; Maria L Wei; Michael C Oldham; Boris C Bastian; Robert L Judson-Torres
Journal:  J Invest Dermatol       Date:  2019-09-30       Impact factor: 8.551

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