Literature DB >> 26915423

Drugging the methylome: DNA methylation and memory.

Andrew J Kennedy1, J David Sweatt1.   

Abstract

Over the past decade, since epigenetic mechanisms were first implicated in memory formation and synaptic plasticity, dynamic DNA methylation reactions have been identified as integral to long-term memory formation, maintenance, and recall. This review incorporates various new findings that DNA methylation mechanisms are important regulators of non-Hebbian plasticity mechanisms, suggesting that these epigenetic mechanisms are a fundamental link between synaptic plasticity and metaplasticity. Because the field of neuroepigenetics is so young and the biochemical tools necessary to probe gene-specific questions are just now being developed and used, this review also speculates about the direction and potential of therapeutics that target epigenetic mechanisms in the central nervous system and the unique pharmacokinetic and pharmacodynamic properties that epigenetic therapies may possess. Mapping the dynamics of the epigenome in response to experiential learning, even a single epigenetic mark in isolation, remains a significant technical and bioinformatic hurdle facing the field, but will be necessary to identify changes to the methylome that govern memory-associated gene expression and effectively drug the epigenome.

Entities:  

Keywords:  Angelman Syndrome; DNA methylation; DNMT; Pitt–Hopkins Syndrome; TET Oxidase; cognitive disorders; cytosine methylation; demethylation; epigenetics; learning; memory; neuroepigenetics; neuropharmacology; pharmacokinetics; psychopharmacology

Mesh:

Year:  2016        PMID: 26915423      PMCID: PMC5710004          DOI: 10.3109/10409238.2016.1150958

Source DB:  PubMed          Journal:  Crit Rev Biochem Mol Biol        ISSN: 1040-9238            Impact factor:   8.250


  95 in total

1.  Differential effects of alphaCaMKII mutation on hippocampal learning and changes in intrinsic neuronal excitability.

Authors:  Masuo Ohno; Evgeny A Sametsky; Alcino J Silva; John F Disterhoft
Journal:  Eur J Neurosci       Date:  2006-04       Impact factor: 3.386

Review 2.  Learning, aging and intrinsic neuronal plasticity.

Authors:  John F Disterhoft; M Matthew Oh
Journal:  Trends Neurosci       Date:  2006-08-30       Impact factor: 13.837

3.  Covalent modification of DNA regulates memory formation.

Authors:  Courtney A Miller; J David Sweatt
Journal:  Neuron       Date:  2007-03-15       Impact factor: 17.173

4.  TET1 and hydroxymethylcytosine in transcription and DNA methylation fidelity.

Authors:  Kristine Williams; Jesper Christensen; Marianne Terndrup Pedersen; Jens V Johansen; Paul A C Cloos; Juri Rappsilber; Kristian Helin
Journal:  Nature       Date:  2011-04-13       Impact factor: 49.962

5.  CpG-binding protein (CXXC finger protein 1) is a component of the mammalian Set1 histone H3-Lys4 methyltransferase complex, the analogue of the yeast Set1/COMPASS complex.

Authors:  Jeong-Heon Lee; David G Skalnik
Journal:  J Biol Chem       Date:  2005-10-26       Impact factor: 5.157

Review 6.  High-throughput functional genomics using CRISPR-Cas9.

Authors:  Ophir Shalem; Neville E Sanjana; Feng Zhang
Journal:  Nat Rev Genet       Date:  2015-04-09       Impact factor: 53.242

Review 7.  The potential of HDAC inhibitors as cognitive enhancers.

Authors:  Johannes Gräff; Li-Huei Tsai
Journal:  Annu Rev Pharmacol Toxicol       Date:  2013       Impact factor: 13.820

8.  TALE-mediated epigenetic suppression of CDKN2A increases replication in human fibroblasts.

Authors:  Diana L Bernstein; John E Le Lay; Elena G Ruano; Klaus H Kaestner
Journal:  J Clin Invest       Date:  2015-04-13       Impact factor: 14.808

9.  Genetic deletion of Gadd45b, a regulator of active DNA demethylation, enhances long-term memory and synaptic plasticity.

Authors:  Faraz A Sultan; Jing Wang; Jennifer Tront; Dan A Liebermann; J David Sweatt
Journal:  J Neurosci       Date:  2012-11-28       Impact factor: 6.167

10.  Tet3 regulates synaptic transmission and homeostatic plasticity via DNA oxidation and repair.

Authors:  Huimei Yu; Yijing Su; Jaehoon Shin; Chun Zhong; Junjie U Guo; Yi-Lan Weng; Fuying Gao; Daniel H Geschwind; Giovanni Coppola; Guo-li Ming; Hongjun Song
Journal:  Nat Neurosci       Date:  2015-04-27       Impact factor: 24.884

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  9 in total

1.  Cognition-Enhancing Vagus Nerve Stimulation Alters the Epigenetic Landscape.

Authors:  Teresa H Sanders; Joseph Weiss; Luke Hogewood; Lan Chen; Casey Paton; Rebekah L McMahan; J David Sweatt
Journal:  J Neurosci       Date:  2019-02-25       Impact factor: 6.167

2.  Effect of dC → d(m5C) substitutions on the folding of intramolecular triplexes with mixed TAT and C+GC base triplets.

Authors:  Carolyn E Carr; Rajkumar Ganugula; Ronald Shikiya; Ana Maria Soto; Luis A Marky
Journal:  Biochimie       Date:  2017-12-24       Impact factor: 4.079

3.  Dynamic DNA methylation regulates neuronal intrinsic membrane excitability.

Authors:  Jarrod P Meadows; Mikael C Guzman-Karlsson; Scott Phillips; Jordan A Brown; Sarah K Strange; J David Sweatt; John J Hablitz
Journal:  Sci Signal       Date:  2016-08-23       Impact factor: 8.192

Review 4.  DNA modifications in models of alcohol use disorders.

Authors:  Christopher T Tulisiak; R Adron Harris; Igor Ponomarev
Journal:  Alcohol       Date:  2016-11-09       Impact factor: 2.405

5.  Tcf4 Regulates Synaptic Plasticity, DNA Methylation, and Memory Function.

Authors:  Andrew J Kennedy; Elizabeth J Rahn; Brynna S Paulukaitis; Katherine E Savell; Holly B Kordasiewicz; Jing Wang; John W Lewis; Jessica Posey; Sarah K Strange; Mikael C Guzman-Karlsson; Scott E Phillips; Kyle Decker; S Timothy Motley; Eric E Swayze; David J Ecker; Todd P Michael; Jeremy J Day; J David Sweatt
Journal:  Cell Rep       Date:  2016-08-25       Impact factor: 9.423

Review 6.  Epigenetic Regulation of Memory-Therapeutic Potential for Disorders.

Authors:  Padmanabh Singh; Sweta Srivas; M K Thakur
Journal:  Curr Neuropharmacol       Date:  2017-11-14       Impact factor: 7.363

7.  Dnmt3a in the dorsal dentate gyrus is a key regulator of fear renewal.

Authors:  Zhiting Gong; Qiang Zhou
Journal:  Sci Rep       Date:  2018-03-23       Impact factor: 4.379

8.  Defense against territorial intrusion is associated with DNA methylation changes in the honey bee brain.

Authors:  Brian R Herb; Molly S Shook; Christopher J Fields; Gene E Robinson
Journal:  BMC Genomics       Date:  2018-03-26       Impact factor: 3.969

9.  Cocaine Directly Impairs Memory Extinction and Alters Brain DNA Methylation Dynamics in Honey Bees.

Authors:  Eirik Søvik; Pauline Berthier; William P Klare; Paul Helliwell; Edwina L S Buckle; Jenny A Plath; Andrew B Barron; Ryszard Maleszka
Journal:  Front Physiol       Date:  2018-02-13       Impact factor: 4.566

  9 in total

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