Literature DB >> 26914401

New Concepts for Increasing the Efficiency in Directed Evolution of Stereoselective Enzymes.

Zhoutong Sun1,2, Ylva Wikmark3, Jan-E Bäckvall4, Manfred T Reetz5,6.   

Abstract

Directed evolution of stereo- and regioselective enzymes constitutes a prolific source of catalysts for asymmetric transformations in organic chemistry. In this endeavor (iterative) saturation mutagenesis at sites lining the binding pocket of enzymes has emerged as the method of choice, but uncertainties regarding the question of how to group many residues into randomization sites and how to choose optimal upward pathways persist. Two new approaches promise to beat the numbers problem effectively. One utilizes a single amino acid as building block for the randomization of a 10-residue site, the other also employs only one but possibly different amino acid at each position of a 9-residue site. The small but smart libraries provide highly enantioselective epoxide hydrolase or lipase mutants, respectively.
© 2016 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Keywords:  directed evolution; enzymes; high-throughput screening; saturation mutagenesis; stereoselectivity

Mesh:

Substances:

Year:  2016        PMID: 26914401     DOI: 10.1002/chem.201504406

Source DB:  PubMed          Journal:  Chemistry        ISSN: 0947-6539            Impact factor:   5.236


  8 in total

1.  Learning epistatic interactions from sequence-activity data to predict enantioselectivity.

Authors:  Julian Zaugg; Yosephine Gumulya; Alpeshkumar K Malde; Mikael Bodén
Journal:  J Comput Aided Mol Des       Date:  2017-12-12       Impact factor: 3.686

Review 2.  Site-Selective Functionalization of (sp3 )C-H Bonds Catalyzed by Artificial Metalloenzymes Containing an Iridium-Porphyrin Cofactor.

Authors:  Yang Gu; Sean N Natoli; Zhennan Liu; Douglas S Clark; John F Hartwig
Journal:  Angew Chem Int Ed Engl       Date:  2019-08-21       Impact factor: 15.336

3.  Substrate Analogues for the Enzyme-Catalyzed Detoxification of the Organophosphate Nerve Agents-Sarin, Soman, and Cyclosarin.

Authors:  Andrew N Bigley; Steven P Harvey; Tamari Narindoshvili; Frank M Raushel
Journal:  Biochemistry       Date:  2021-09-08       Impact factor: 3.321

Review 4.  Acyltransferases as Tools for Polyketide Synthase Engineering.

Authors:  Ewa Maria Musiol-Kroll; Wolfgang Wohlleben
Journal:  Antibiotics (Basel)       Date:  2018-07-18

Review 5.  Role of conformational dynamics in the evolution of novel enzyme function.

Authors:  Miguel A Maria-Solano; Eila Serrano-Hervás; Adrian Romero-Rivera; Javier Iglesias-Fernández; Sílvia Osuna
Journal:  Chem Commun (Camb)       Date:  2018-06-19       Impact factor: 6.222

6.  Engineered Enzymes Enable Selective N-Alkylation of Pyrazoles With Simple Haloalkanes.

Authors:  Ludwig L Bengel; Benjamin Aberle; Alexander-N Egler-Kemmerer; Samuel Kienzle; Bernhard Hauer; Stephan C Hammer
Journal:  Angew Chem Int Ed Engl       Date:  2021-01-21       Impact factor: 15.336

Review 7.  Making Enzymes Suitable for Organic Chemistry by Rational Protein Design.

Authors:  Manfred Reetz
Journal:  Chembiochem       Date:  2022-04-27       Impact factor: 3.461

8.  Computational Design of Enantiocomplementary Epoxide Hydrolases for Asymmetric Synthesis of Aliphatic and Aromatic Diols.

Authors:  Hesam Arabnejad; Elvira Bombino; Dana I Colpa; Peter A Jekel; Milos Trajkovic; Hein J Wijma; Dick B Janssen
Journal:  Chembiochem       Date:  2020-03-05       Impact factor: 3.164

  8 in total

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