Literature DB >> 26913921

Taking advantage of an old concept, "illegitimate transcription", for a proposed novel method of genetic diagnosis of McArdle disease.

Ines Garcia-Consuegra1,2,3, Alberto Blázquez1,2,3, Juan Carlos Rubio1,2,3, Joaquín Arenas1,2,3, Alfonsina Ballester-Lopez4, Adrián González-Quintana1,2, Antoni L Andreu5, Tomàs Pinós3,6, Jaume Coll-Cantí4,7, Alejandro Lucia2,8, Gisela Nogales-Gadea4, Miguel A Martín1,2,3.   

Abstract

PURPOSE: McArdle disease is a metabolic disorder caused by pathogenic mutations in the PYGM gene. Timely diagnosis can sometimes be difficult with direct genomic analysis, which requires additional studies of cDNA from muscle transcripts. Although the "nonsense-mediated mRNA decay" (NMD) eliminates tissue-specific aberrant transcripts, there is some residual transcription of tissue-specific genes in virtually all cells, such as peripheral blood mononuclear cells (PBMCs).
METHODS: We studied a subset of the main types of PYGM mutations (deletions, missense, nonsense, silent, or splicing mutations) in cDNA from easily accessible cells (PBMCs) in 12 McArdle patients.
RESULTS: Analysis of cDNA from PBMCs allowed detection of all mutations. Importantly, the effects of mutations with unknown pathogenicity (silent and splicing mutations) were characterized in PBMCs. Because the NMD mechanism does not seem to operate in nonspecific cells, PBMCs were more suitable than muscle biopsies for detecting the pathogenicity of some PYGM mutations, notably the silent mutation c.645G>A (p.K215=), whose effect in the splicing of intron 6 was unnoticed in previous muscle transcriptomic studies.
CONCLUSION: We propose considering the use of PBMCs for detecting mutations that are thought to cause McArdle disease, particularly for studying their actual pathogenicity.Genet Med 18 11, 1128-1135.

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Year:  2016        PMID: 26913921     DOI: 10.1038/gim.2015.219

Source DB:  PubMed          Journal:  Genet Med        ISSN: 1098-3600            Impact factor:   8.822


  25 in total

Review 1.  Genes and exercise intolerance: insights from McArdle disease.

Authors:  Gisela Nogales-Gadea; Richard Godfrey; Alfredo Santalla; Jaume Coll-Cantí; Guillem Pintos-Morell; Tomàs Pinós; Joaquín Arenas; Miguel Angel Martín; Alejandro Lucia
Journal:  Physiol Genomics       Date:  2015-10-13       Impact factor: 3.107

Review 2.  Applying nonsense-mediated mRNA decay research to the clinic: progress and challenges.

Authors:  Holly A Kuzmiak; Lynne E Maquat
Journal:  Trends Mol Med       Date:  2006-06-16       Impact factor: 11.951

3.  Illegitimate (or ectopic) transcription proceeds through the usual promoters.

Authors:  J Chelly; J P Hugnot; J P Concordet; J C Kaplan; A Kahn
Journal:  Biochem Biophys Res Commun       Date:  1991-07-31       Impact factor: 3.575

4.  Minimally symptomatic mcardle disease, expanding the genotype-phenotype spectrum.

Authors:  Petros Petrou; Marios Pantzaris; Maria Dionysiou; Anthi Drousiotou; Theodoros Kyriakides
Journal:  Muscle Nerve       Date:  2015-06-30       Impact factor: 3.217

5.  Genotypic and phenotypic features of McArdle disease: insights from the Spanish national registry.

Authors:  Alejandro Lucia; Jonatan R Ruiz; Alfredo Santalla; Gisela Nogales-Gadea; Juan C Rubio; Inés García-Consuegra; Ana Cabello; Margarita Pérez; Susana Teijeira; Irene Vieitez; Carmen Navarro; Joaquín Arenas; Miguel A Martin; Antoni L Andreu
Journal:  J Neurol Neurosurg Psychiatry       Date:  2012-01-16       Impact factor: 10.154

6.  Dysferlin expression in monocytes: a source of mRNA for mutation analysis.

Authors:  N De Luna; A Freixas; P Gallano; L Caselles; R Rojas-García; C Paradas; G Nogales; R Dominguez-Perles; L Gonzalez-Quereda; J J Vílchez; C Márquez; J Bautista; A Guerrero; J A Salazar; A Pou; I Illa; E Gallardo
Journal:  Neuromuscul Disord       Date:  2006-10-27       Impact factor: 4.296

7.  Three new mutations in patients with myophosphorylase deficiency (McArdle disease).

Authors:  S Tsujino; S Shanske; I Nonaka; Y Eto; J R Mendell; G M Fenichel; S DiMauro
Journal:  Am J Hum Genet       Date:  1994-01       Impact factor: 11.025

8.  Abnormal expression of dysferlin in skeletal muscle and monocytes supports primary dysferlinopathy in patients with one mutated allele.

Authors:  M Meznaric; L Gonzalez-Quereda; E Gallardo; N de Luna; P Gallano; M Fanin; C Angelini; B Peterlin; J Zidar
Journal:  Eur J Neurol       Date:  2010-10-18       Impact factor: 6.089

9.  Next-generation sequencing to estimate the prevalence of a great unknown: McArdle disease.

Authors:  Gisela Nogales-Gadea; Tomàs Pinós; Antoni L Andreu; Miguel A Martín; Joaquin Arenas; Alejandro Lucia
Journal:  Genet Med       Date:  2015-08       Impact factor: 8.822

10.  Comparison of dysferlin expression in human skeletal muscle with that in monocytes for the diagnosis of dysferlin myopathy.

Authors:  Eduard Gallardo; Noemi de Luna; Jordi Diaz-Manera; Ricardo Rojas-García; Lidia Gonzalez-Quereda; Bàrbara Flix; Antoine de Morrée; Silvère van der Maarel; Isabel Illa
Journal:  PLoS One       Date:  2011-12-16       Impact factor: 3.240

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  4 in total

1.  Identification of Potential Muscle Biomarkers in McArdle Disease: Insights from Muscle Proteome Analysis.

Authors:  Inés García-Consuegra; Sara Asensio-Peña; Rocío Garrido-Moraga; Tomàs Pinós; Cristina Domínguez-González; Alfredo Santalla; Gisela Nogales-Gadea; Pablo Serrano-Lorenzo; Antoni L Andreu; Joaquín Arenas; José L Zugaza; Alejandro Lucia; Miguel A Martín
Journal:  Int J Mol Sci       Date:  2022-04-22       Impact factor: 6.208

2.  Myophosphorylase (PYGM) mutations determined by next generation sequencing in a cohort from Turkey with McArdle disease.

Authors:  Güldal Inal-Gültekin; Bahar Toptaş-Hekimoğlu; Zeliha Görmez; Özlem Gelişin; Hacer Durmuş; Bekir Ergüner; Hüseyin Demirci; Mahmut Ş Sağıroğlu; Yeşim Parman; Feza Deymeer; Hülya Yılmaz-Aydoğan; Sadrettin Pençe; Can Ebru Bekircan-Kurt; Ersin Tan; Sevim Erdem-Özdamar; Duran Üstek; Urs Giger; Oğuz Öztürk; Piraye Serdaroğlu-Oflazer
Journal:  Neuromuscul Disord       Date:  2017-06-16       Impact factor: 4.296

3.  Genotypic and phenotypic features of all Spanish patients with McArdle disease: a 2016 update.

Authors:  Alfredo Santalla; Gisela Nogales-Gadea; Alberto Blázquez Encinar; Irene Vieitez; Adrian González-Quintana; Pablo Serrano-Lorenzo; Inés García Consuegra; Sara Asensio; Alfonsina Ballester-Lopez; Guillem Pintos-Morell; Jaume Coll-Cantí; Helios Pareja-Galeano; Jorge Díez-Bermejo; Margarita Pérez; Antoni L Andreu; Tomàs Pinós; Joaquín Arenas; Miguel A Martín; Alejandro Lucia
Journal:  BMC Genomics       Date:  2017-11-14       Impact factor: 3.969

Review 4.  Preclinical Research in McArdle Disease: A Review of Research Models and Therapeutic Strategies.

Authors:  Mónica Villarreal-Salazar; Astrid Brull; Gisela Nogales-Gadea; Antoni L Andreu; Miguel A Martín; Joaquín Arenas; Alfredo Santalla; Alejandro Lucia; John Vissing; Thomas O Krag; Tomàs Pinós
Journal:  Genes (Basel)       Date:  2021-12-28       Impact factor: 4.096

  4 in total

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