| Literature DB >> 26912132 |
Qi Xu1, Yadong Song2, Ran Liu3, Yang Chen4, Yang Zhang5, Yang Li6, Wenming Zhao7, Guobin Chang8, Guohong Chen9,10.
Abstract
BACKGROUND: Dopamine β-hydroxylase (DBH) is a critical enzyme in the biosynthesis of catecholamines. This enzyme's role in neuroendocrine regulation is well known, but there are some indications that it may also modulate reproduction and endocrine in mammals and birds. We selected goose (Anas cygnoides) as an ideal model species for investigating the role of DBH in avian reproduction.Entities:
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Year: 2016 PMID: 26912132 PMCID: PMC4766643 DOI: 10.1186/s12863-016-0355-8
Source DB: PubMed Journal: BMC Genet ISSN: 1471-2156 Impact factor: 2.797
Fig. 1Multiple sequence alignment of the deduced amino acid sequence of gDBH with those of other species. All DBH protein sequences from 11 species were aligned by the Clustal W program. Additional GenBank accession numbers not mentioned elsewhere are as follows: chicken (Gallus gallus, XM_415429), duck (Anas platyrhynchos, XM_005013310), turkey (Meleagris gallopavo, XM_003211322), zebra finch (Taeniopygia guttata, XM_004174352), human (Homo sapiens, NM_000787), mouse (Mus musculus, NM_138942), pig (Sus scrofa, XM_001927211), cattle (Bos taurus, NM_180995), goat (Capra hircus, XM_005687352), zebra fish (Danio rerio, NM_001109694). Asterisk indicates residues that are identical among all species; dashes indicate gaps introduced to facilitate alignment; the underline indicates the conserved domains
Fig. 2Phylogenetic tree based on the amino acid sequence of gDBH and other homologous sequences. The tree was constructed with Clustal W. The reliability of the neighbor-joining tree was estimated by bootstrap analysis with 1,000 replicates. Bootstrap values are shown on the lineages of the tree and major taxonomic clusters are indicated separately. The position of the root of the phylogenetic tree was established by using Danio rerio as an outgroup. The scale bar indicates 5 % amino acid divergence within a sequence
Fig. 3Expression of gDBH in various tissues of Zhedong geese. Gene expression was determined by qPCR and is represented relative to GAPDH expression. Vertical bars represent the mean ± S.D. (n = 3). Different capital letters above error bars indicate highly significant differences between means (P < 0.01). Different lower case letters indicate significant differences (P < 0.05)
Fig. 4Expression patterns of gDBH during the reproductive cycle of Zhedong geese. Gene expression was determined by qPCR and is represented relative to GAPDH expression. Vertical bars represent the mean ± S.D. (n = 3). Different letters above error bars indicate highly significant differences between respective means (P < 0.01)
Fig. 5DBH expression in tissues of Zhedong geese and Yangzhou geese during ovulation. Gene expression was determined using qPCR and is represented relative to expression of GAPDH. Vertical bars represent the mean ± S.D. (n = 3). Different letters above error bars indicate highly significant differences between respective means (P < 0.01)
Absolute frequencies of the five nsSNPs on DBH gene in Yangzhou goose and Zhedong goose
| Breeds | c1739C > T | c1760G > T | c1765A > G | c1792T > C | c1861G > C | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CC | CT | TT |
| GG | GT | TT |
| AA | AG | GG |
| TT | TC | CC |
| GG | GC | CC |
| |
| Yangzhou goose( | 12 | 12 | 5 | 0.008 | 4 | 9 | 16 | 0.02 | 0 | 9 | 20 | 0.03 | 2 | 6 | 21 | 0.01 | 0 | 4 | 25 | 0.07 |
| Zhedong goose( | 4 | 5 | 13 | 1 | 1 | 20 | 5 | 5 | 12 | 9 | 3 | 10 | 0 | 0 | 22 | |||||